RNA–Protein interactions for RNA: YHR021W-A

ECM12, Transcript of Putative protein of unknown function, yeastyeast

Gene ECM12, Length 456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM12YHR021W-A FAP1P53971 965 aa9.28□□□□□ -0.92
ECM12YHR021W-A PRY3P47033 881 aa8.86□□□□□ -0.99
ECM12YHR021W-A YCK3P39962 524 aa8.57□□□□□ -1.04
ECM12YHR021W-A HAA1Q12753 694 aaKnown RBP8.26□□□□□ -1.09
ECM12YHR021W-A MTC1P47018 478 aaKnown RBP8.12□□□□□ -1.11
ECM12YHR021W-A AAD16Q02895 342 aa8.08□□□□□ -1.12
ECM12YHR021W-A PRI1P10363 409 aa7.93□□□□□ -1.14
ECM12YHR021W-A BUD31P25337 157 aaPredicted RBP7.61□□□□□ -1.19
ECM12YHR021W-A DRS1P32892 752 aaKnown RBP7.38□□□□□ -1.23
ECM12YHR021W-A TSR3Q12094 313 aaKnown RBP7.32□□□□□ -1.24
ECM12YHR021W-A YGL015CP33199 130 aa7.27□□□□□ -1.25
ECM12YHR021W-A RPG1P38249 964 aaKnown RBP7.04□□□□□ -1.28
ECM12YHR021W-A ISW2Q08773 1120 aa7.03□□□□□ -1.28
ECM12YHR021W-A MRPL32P25348 183 aa6.99□□□□□ -1.29
ECM12YHR021W-A SIS1P25294 352 aaKnown RBP6.93□□□□□ -1.3
ECM12YHR021W-A DIP2Q12220 943 aaPredicted RBP6.55□□□□□ -1.36
ECM12YHR021W-A UBP9P39967 754 aa6.51□□□□□ -1.37
ECM12YHR021W-A UBP10P53874 792 aaPredicted RBP6.47□□□□□ -1.37
ECM12YHR021W-A CDC27P38042 758 aa6.42□□□□□ -1.38
ECM12YHR021W-A MAP2P38174 421 aaKnown RBP6.4□□□□□ -1.38
ECM12YHR021W-A RSE1Q04693 1361 aaKnown RBP6.39□□□□□ -1.39
ECM12YHR021W-A AVT3P36062 692 aa6.24□□□□□ -1.41
ECM12YHR021W-A RPL17AP05740 184 aaKnown RBP6.21□□□□□ -1.42
ECM12YHR021W-A TGL3P40308 642 aa6.21□□□□□ -1.42
ECM12YHR021W-A RPL17BP46990 184 aaKnown RBP6.21□□□□□ -1.42
ECM12YHR021W-A REB1P21538 810 aa6.2□□□□□ -1.42
ECM12YHR021W-A TIF4632P39936 914 aaKnown RBP6.11□□□□□ -1.43
ECM12YHR021W-A RGA2Q06407 1009 aa6.05□□□□□ -1.44
ECM12YHR021W-A BFR2Q06631 534 aaKnown RBP6.03□□□□□ -1.44
ECM12YHR021W-A YKR023WP36119 530 aaKnown RBP5.95□□□□□ -1.46
ECM12YHR021W-A SLX5P32828 619 aaKnown RBP5.92□□□□□ -1.46
ECM12YHR021W-A SPT21P35209 758 aa5.91□□□□□ -1.46
ECM12YHR021W-A YBL029C-AQ3E756 94 aa5.91□□□□□ -1.46
ECM12YHR021W-A AIR2Q12476 344 aaKnown RBP5.9□□□□□ -1.46
ECM12YHR021W-A SCY1P53009 804 aa5.88□□□□□ -1.47
ECM12YHR021W-A MST1P07236 462 aa5.83□□□□□ -1.48
ECM12YHR021W-A DCD1P06773 312 aa5.8□□□□□ -1.48
ECM12YHR021W-A HOP09932 586 aa5.8□□□□□ -1.48
ECM12YHR021W-A TFC8Q12308 588 aa5.8□□□□□ -1.48
ECM12YHR021W-A FKH1P40466 484 aa5.79□□□□□ -1.48
ECM12YHR021W-A VNX1P42839 908 aa5.79□□□□□ -1.48
ECM12YHR021W-A YJL171CP46992 396 aa5.76□□□□□ -1.49
ECM12YHR021W-A RIM101P33400 625 aa5.66□□□□□ -1.5
ECM12YHR021W-A SPP1Q03012 353 aa5.65□□□□□ -1.5
ECM12YHR021W-A BCH2P36122 765 aa5.59□□□□□ -1.51
ECM12YHR021W-A BMT6Q12291 365 aa5.58□□□□□ -1.52
ECM12YHR021W-A YOR238WQ08634 303 aa5.55□□□□□ -1.52
ECM12YHR021W-A RGA1P39083 1007 aa5.54□□□□□ -1.52
ECM12YHR021W-A TIF11P38912 153 aaKnown RBP5.5□□□□□ -1.53
ECM12YHR021W-A OXP1P28273 1286 aa5.47□□□□□ -1.53
ECM12YHR021W-A WSC3Q12215 556 aa5.45□□□□□ -1.54
ECM12YHR021W-A NSR1P27476 414 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
ECM12YHR021W-A EPS1P40557 701 aa5.44□□□□□ -1.54
ECM12YHR021W-A BDF1P35817 686 aa5.42□□□□□ -1.54
ECM12YHR021W-A LDB19Q12502 818 aa5.42□□□□□ -1.54
ECM12YHR021W-A PTP3P40048 928 aa5.4□□□□□ -1.54
ECM12YHR021W-A IOC2Q12072 812 aa5.4□□□□□ -1.54
ECM12YHR021W-A YIL055CP40523 627 aaKnown RBP5.39□□□□□ -1.55
ECM12YHR021W-A RSM7P47150 247 aa5.3□□□□□ -1.56
ECM12YHR021W-A YAH1Q12184 172 aaKnown RBP5.3□□□□□ -1.56
ECM12YHR021W-A BCK2P33306 851 aa5.29□□□□□ -1.56
ECM12YHR021W-A ULI1P43604 169 aa5.29□□□□□ -1.56
ECM12YHR021W-A AI2P03876 854 aa5.28□□□□□ -1.56
ECM12YHR021W-A BBC1P47068 1157 aa5.28□□□□□ -1.56
ECM12YHR021W-A YAP5P40574 245 aa5.25□□□□□ -1.57
ECM12YHR021W-A YLR271WQ06152 274 aa5.18□□□□□ -1.58
ECM12YHR021W-A TFA1P36100 482 aa5.17□□□□□ -1.58
ECM12YHR021W-A RTG1P32607 177 aa5.14□□□□□ -1.59
ECM12YHR021W-A NCR1Q12200 1170 aa5.14□□□□□ -1.59
ECM12YHR021W-A PSD2P53037 1138 aaKnown RBP5.12□□□□□ -1.59
ECM12YHR021W-A GTT3P39996 337 aa5.11□□□□□ -1.59
ECM12YHR021W-A PIB1Q06651 286 aa5.1□□□□□ -1.59
ECM12YHR021W-A SRC1Q03707 834 aa5.09□□□□□ -1.59
ECM12YHR021W-A MRM1P25270 412 aa5.08□□□□□ -1.6
ECM12YHR021W-A XDJ1P39102 459 aa5.07□□□□□ -1.6
ECM12YHR021W-A CHL1P22516 861 aaPredicted RBP5.06□□□□□ -1.6
ECM12YHR021W-A SEC61P32915 480 aa5.06□□□□□ -1.6
ECM12YHR021W-A SSP1P38871 571 aa5.05□□□□□ -1.6
ECM12YHR021W-A ARP8Q12386 881 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
ECM12YHR021W-A MSB4Q12317 492 aa5.03□□□□□ -1.6
ECM12YHR021W-A DPS1P04802 557 aaKnown RBP5.01□□□□□ -1.61
ECM12YHR021W-A EAP1P36041 632 aaKnown RBP5.01□□□□□ -1.61
ECM12YHR021W-A YNL035CP53962 389 aaKnown RBP5□□□□□ -1.61
ECM12YHR021W-A CST9Q06032 482 aa5□□□□□ -1.61
ECM12YHR021W-A TRP5P00931 707 aaKnown RBP4.98□□□□□ -1.61
ECM12YHR021W-A PRE3P38624 215 aa4.97□□□□□ -1.61
ECM12YHR021W-A VPS29P38759 282 aa4.97□□□□□ -1.61
ECM12YHR021W-A DBP1P24784 617 aaKnown RBP4.96□□□□□ -1.62
ECM12YHR021W-A YMR1P47147 688 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
ECM12YHR021W-A RTG3P38165 486 aa4.95□□□□□ -1.62
ECM12YHR021W-A MGA2P40578 1113 aa4.95□□□□□ -1.62
ECM12YHR021W-A SET4P42948 560 aa4.95□□□□□ -1.62
ECM12YHR021W-A YFR006WP43590 535 aa4.95□□□□□ -1.62
ECM12YHR021W-A YOL036WQ08206 761 aa4.95□□□□□ -1.62
ECM12YHR021W-A SAP30P38429 201 aa4.94□□□□□ -1.62
ECM12YHR021W-A STS1P38637 319 aa4.92□□□□□ -1.62
ECM12YHR021W-A VMA1P17255 1071 aaKnown RBP4.9□□□□□ -1.63
ECM12YHR021W-A VRP1P37370 817 aa4.9□□□□□ -1.63
ECM12YHR021W-A RCR1P38212 213 aa4.9□□□□□ -1.63
ECM12YHR021W-A SAM3Q08986 587 aa4.87□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms