RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W MTC1P47018 478 aaKnown RBP13.71□□□□□ -0.21
RPN12YFR052W FAP1P53971 965 aa12.76□□□□□ -0.37
RPN12YFR052W DRS1P32892 752 aaKnown RBP12.25□□□□□ -0.45
RPN12YFR052W PRY3P47033 881 aa12.05□□□□□ -0.48
RPN12YFR052W PRI1P10363 409 aa11.84□□□□□ -0.51
RPN12YFR052W AAD16Q02895 342 aa11.8□□□□□ -0.52
RPN12YFR052W YCK3P39962 524 aa11.53□□□□□ -0.56
RPN12YFR052W ISW2Q08773 1120 aa11.41□□□□□ -0.58
RPN12YFR052W RPG1P38249 964 aaKnown RBP11.33□□□□□ -0.6
RPN12YFR052W HAA1Q12753 694 aaKnown RBP11.32□□□□□ -0.6
RPN12YFR052W TSR3Q12094 313 aaKnown RBP11.12□□□□□ -0.63
RPN12YFR052W DIP2Q12220 943 aaPredicted RBP10.94□□□□□ -0.66
RPN12YFR052W RSE1Q04693 1361 aaKnown RBP10.7□□□□□ -0.7
RPN12YFR052W MRPL32P25348 183 aa10.66□□□□□ -0.7
RPN12YFR052W AVT3P36062 692 aa10.47□□□□□ -0.73
RPN12YFR052W RPL17AP05740 184 aaKnown RBP10.4□□□□□ -0.74
RPN12YFR052W RPL17BP46990 184 aaKnown RBP10.4□□□□□ -0.74
RPN12YFR052W YGL015CP33199 130 aa10.38□□□□□ -0.75
RPN12YFR052W REB1P21538 810 aa10.34□□□□□ -0.75
RPN12YFR052W MON2P48563 1636 aaPredicted RBP10.15□□□□□ -0.78
RPN12YFR052W CDC27P38042 758 aa10.12□□□□□ -0.79
RPN12YFR052W INO80P53115 1489 aa10.04□□□□□ -0.8
RPN12YFR052W SPT21P35209 758 aa10□□□□□ -0.81
RPN12YFR052W YKR023WP36119 530 aaKnown RBP9.98□□□□□ -0.81
RPN12YFR052W BFR2Q06631 534 aaKnown RBP9.95□□□□□ -0.82
RPN12YFR052W UBP10P53874 792 aaPredicted RBP9.87□□□□□ -0.83
RPN12YFR052W MAP2P38174 421 aaKnown RBP9.83□□□□□ -0.84
RPN12YFR052W TY1B-DR4Q07793 1604 aa9.82□□□□□ -0.84
RPN12YFR052W BUD31P25337 157 aaPredicted RBP9.77□□□□□ -0.85
RPN12YFR052W TFC8Q12308 588 aa9.76□□□□□ -0.85
RPN12YFR052W TCB3Q03640 1545 aaKnown RBP9.75□□□□□ -0.85
RPN12YFR052W SWR1Q05471 1514 aa9.75□□□□□ -0.85
RPN12YFR052W SGS1P35187 1447 aa9.73□□□□□ -0.85
RPN12YFR052W HOP09932 586 aa9.72□□□□□ -0.85
RPN12YFR052W DCD1P06773 312 aa9.69□□□□□ -0.86
RPN12YFR052W DNA2P38859 1522 aa9.63□□□□□ -0.87
RPN12YFR052W RIM101P33400 625 aa9.53□□□□□ -0.88
RPN12YFR052W SCY1P53009 804 aa9.53□□□□□ -0.88
RPN12YFR052W KOG1P38873 1557 aa9.53□□□□□ -0.88
RPN12YFR052W HSL1P34244 1518 aa9.49□□□□□ -0.89
RPN12YFR052W TGL3P40308 642 aa9.44□□□□□ -0.9
RPN12YFR052W SPT6P23615 1451 aaKnown RBP9.44□□□□□ -0.9
RPN12YFR052W SLX5P32828 619 aaKnown RBP9.43□□□□□ -0.9
RPN12YFR052W BCH2P36122 765 aa9.43□□□□□ -0.9
RPN12YFR052W TIF4632P39936 914 aaKnown RBP9.41□□□□□ -0.9
RPN12YFR052W SPA2P23201 1466 aaKnown RBP9.34□□□□□ -0.91
RPN12YFR052W HIR3P47171 1648 aa9.29□□□□□ -0.92
RPN12YFR052W UBP9P39967 754 aa9.23□□□□□ -0.93
RPN12YFR052W OXP1P28273 1286 aa9.2□□□□□ -0.94
RPN12YFR052W SIS1P25294 352 aaKnown RBP9.17□□□□□ -0.94
RPN12YFR052W THO2P53552 1597 aaKnown RBP9.13□□□□□ -0.95
RPN12YFR052W EPS1P40557 701 aa9.13□□□□□ -0.95
RPN12YFR052W XRN1P22147 1528 aaKnown RBP9.12□□□□□ -0.95
RPN12YFR052W BDF1P35817 686 aa9.12□□□□□ -0.95
RPN12YFR052W SSN2P38931 1420 aa9.09□□□□□ -0.95
RPN12YFR052W ECM5Q03214 1411 aa9.08□□□□□ -0.96
RPN12YFR052W BUD4P47136 1447 aa9.05□□□□□ -0.96
RPN12YFR052W MST1P07236 462 aa9.05□□□□□ -0.96
RPN12YFR052W MDS3P53094 1487 aa9□□□□□ -0.97
RPN12YFR052W REV3P14284 1504 aa9□□□□□ -0.97
RPN12YFR052W ATG2P53855 1592 aa8.99□□□□□ -0.97
RPN12YFR052W PTP3P40048 928 aa8.96□□□□□ -0.98
RPN12YFR052W PEP1P32319 1579 aa8.95□□□□□ -0.98
RPN12YFR052W YIL055CP40523 627 aaKnown RBP8.95□□□□□ -0.98
RPN12YFR052W NSR1P27476 414 aaKnown RBP RIP-Chip data8.93□□□□□ -0.98not detected
RPN12YFR052W YOR238WQ08634 303 aa8.91□□□□□ -0.98
RPN12YFR052W SIN3P22579 1536 aa8.9□□□□□ -0.99
RPN12YFR052W RSM7P47150 247 aa8.89□□□□□ -0.99
RPN12YFR052W YBL029C-AQ3E756 94 aa8.89□□□□□ -0.99
RPN12YFR052W SSK2P53599 1579 aa8.86□□□□□ -0.99
RPN12YFR052W ESP1Q03018 1630 aa8.86□□□□□ -0.99
RPN12YFR052W TAF2P23255 1407 aa8.86□□□□□ -0.99
RPN12YFR052W AI2P03876 854 aa8.84□□□□□ -0.99
RPN12YFR052W BBC1P47068 1157 aa8.84□□□□□ -0.99
RPN12YFR052W VNX1P42839 908 aa8.81□□□□□ -1
RPN12YFR052W YAP5P40574 245 aa8.78□□□□□ -1
RPN12YFR052W SKI3P17883 1432 aaKnown RBP8.78□□□□□ -1
RPN12YFR052W YAH1Q12184 172 aaKnown RBP8.76□□□□□ -1.01
RPN12YFR052W BPT1P14772 1559 aa8.76□□□□□ -1.01
RPN12YFR052W MYO2P19524 1574 aaKnown RBP8.71□□□□□ -1.02
RPN12YFR052W TFA1P36100 482 aa8.71□□□□□ -1.02
RPN12YFR052W YLR271WQ06152 274 aa8.68□□□□□ -1.02
RPN12YFR052W TY2B-LR1P0C2J3 1770 aa8.67□□□□□ -1.02
RPN12YFR052W TY2B-FP0CX63 1770 aa8.67□□□□□ -1.02
RPN12YFR052W TY2B-GR2P0CX64 1770 aa8.67□□□□□ -1.02
RPN12YFR052W TY2B-CP25384 1770 aa8.67□□□□□ -1.02
RPN12YFR052W SPP1Q03012 353 aa8.67□□□□□ -1.02
RPN12YFR052W TY2B-DR2Q03494 1770 aa8.67□□□□□ -1.02
RPN12YFR052W TY1B-DR1Q03855 1755 aa8.67□□□□□ -1.02
RPN12YFR052W TY2B-DR3Q07791 1770 aaKnown RBP8.67□□□□□ -1.02
RPN12YFR052W TY2B-OR1Q12113 1770 aa8.67□□□□□ -1.02
RPN12YFR052W TY2B-DR1Q12472 1770 aa8.67□□□□□ -1.02
RPN12YFR052W TY2B-OR2Q12501 1770 aa8.67□□□□□ -1.02
RPN12YFR052W WSC3Q12215 556 aa8.65□□□□□ -1.02
RPN12YFR052W PSD2P53037 1138 aaKnown RBP8.63□□□□□ -1.03
RPN12YFR052W SCC2Q04002 1493 aa8.62□□□□□ -1.03
RPN12YFR052W AIR2Q12476 344 aaKnown RBP8.61□□□□□ -1.03
RPN12YFR052W YPK9Q12697 1472 aa8.61□□□□□ -1.03
RPN12YFR052W YCF1P39109 1515 aaKnown RBP8.6□□□□□ -1.03
RPN12YFR052W UFD4P33202 1483 aa8.6□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms