RNA–Protein interactions for RNA: YCR024C-A

PMP1, Transcript of Regulatory subunit for the plasma membrane H(+)-ATPase Pma1p, yeastyeast

Gene PMP1, Length 123 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMP1YCR024C-A FAP1P53971 965 aa8.86□□□□□ -0.99
PMP1YCR024C-A MTC1P47018 478 aaKnown RBP8.45□□□□□ -1.06
PMP1YCR024C-A PRY3P47033 881 aa8.37□□□□□ -1.07
PMP1YCR024C-A YCK3P39962 524 aa7.92□□□□□ -1.14
PMP1YCR024C-A AAD16Q02895 342 aa7.84□□□□□ -1.15
PMP1YCR024C-A HAA1Q12753 694 aaKnown RBP7.83□□□□□ -1.16
PMP1YCR024C-A PRI1P10363 409 aa7.75□□□□□ -1.17
PMP1YCR024C-A DRS1P32892 752 aaKnown RBP7.36□□□□□ -1.23
PMP1YCR024C-A TSR3Q12094 313 aaKnown RBP7.22□□□□□ -1.25
PMP1YCR024C-A ISW2Q08773 1120 aa7.2□□□□□ -1.26
PMP1YCR024C-A RPG1P38249 964 aaKnown RBP7.14□□□□□ -1.27
PMP1YCR024C-A YGL015CP33199 130 aa7.03□□□□□ -1.28
PMP1YCR024C-A BUD31P25337 157 aaPredicted RBP6.99□□□□□ -1.29
PMP1YCR024C-A MRPL32P25348 183 aa6.96□□□□□ -1.3
PMP1YCR024C-A DIP2Q12220 943 aaPredicted RBP6.66□□□□□ -1.34
PMP1YCR024C-A RSE1Q04693 1361 aaKnown RBP6.6□□□□□ -1.35
PMP1YCR024C-A SIS1P25294 352 aaKnown RBP6.51□□□□□ -1.37
PMP1YCR024C-A REB1P21538 810 aa6.44□□□□□ -1.38
PMP1YCR024C-A UBP10P53874 792 aaPredicted RBP6.41□□□□□ -1.38
PMP1YCR024C-A CDC27P38042 758 aa6.4□□□□□ -1.38
PMP1YCR024C-A RPL17AP05740 184 aaKnown RBP6.39□□□□□ -1.39
PMP1YCR024C-A RPL17BP46990 184 aaKnown RBP6.39□□□□□ -1.39
PMP1YCR024C-A MAP2P38174 421 aaKnown RBP6.34□□□□□ -1.39
PMP1YCR024C-A UBP9P39967 754 aa6.32□□□□□ -1.4
PMP1YCR024C-A AVT3P36062 692 aa6.26□□□□□ -1.41
PMP1YCR024C-A TIF4632P39936 914 aaKnown RBP6.14□□□□□ -1.43
PMP1YCR024C-A TGL3P40308 642 aa6.14□□□□□ -1.43
PMP1YCR024C-A YKR023WP36119 530 aaKnown RBP6.1□□□□□ -1.43
PMP1YCR024C-A SPT21P35209 758 aa6.06□□□□□ -1.44
PMP1YCR024C-A TFC8Q12308 588 aa6.01□□□□□ -1.45
PMP1YCR024C-A SLX5P32828 619 aaKnown RBP5.99□□□□□ -1.45
PMP1YCR024C-A SCY1P53009 804 aa5.98□□□□□ -1.45
PMP1YCR024C-A HOP09932 586 aa5.97□□□□□ -1.45
PMP1YCR024C-A DCD1P06773 312 aa5.93□□□□□ -1.46
PMP1YCR024C-A BFR2Q06631 534 aaKnown RBP5.89□□□□□ -1.47
PMP1YCR024C-A YBL029C-AQ3E756 94 aa5.81□□□□□ -1.48
PMP1YCR024C-A BCH2P36122 765 aa5.78□□□□□ -1.48
PMP1YCR024C-A MST1P07236 462 aa5.77□□□□□ -1.49
PMP1YCR024C-A RIM101P33400 625 aa5.76□□□□□ -1.49
PMP1YCR024C-A VNX1P42839 908 aa5.72□□□□□ -1.49
PMP1YCR024C-A AIR2Q12476 344 aaKnown RBP5.7□□□□□ -1.5
PMP1YCR024C-A YJL171CP46992 396 aa5.68□□□□□ -1.5
PMP1YCR024C-A FKH1P40466 484 aa5.64□□□□□ -1.51
PMP1YCR024C-A SPP1Q03012 353 aa5.64□□□□□ -1.51
PMP1YCR024C-A YOR238WQ08634 303 aa5.64□□□□□ -1.51
PMP1YCR024C-A BDF1P35817 686 aa5.6□□□□□ -1.51
PMP1YCR024C-A EPS1P40557 701 aa5.6□□□□□ -1.51
PMP1YCR024C-A NSR1P27476 414 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
PMP1YCR024C-A TIF11P38912 153 aaKnown RBP5.52□□□□□ -1.53
PMP1YCR024C-A OXP1P28273 1286 aa5.51□□□□□ -1.53
PMP1YCR024C-A YIL055CP40523 627 aaKnown RBP5.51□□□□□ -1.53
PMP1YCR024C-A WSC3Q12215 556 aa5.51□□□□□ -1.53
PMP1YCR024C-A BMT6Q12291 365 aa5.51□□□□□ -1.53
PMP1YCR024C-A PTP3P40048 928 aa5.49□□□□□ -1.53
PMP1YCR024C-A YAP5P40574 245 aa5.49□□□□□ -1.53
PMP1YCR024C-A BBC1P47068 1157 aa5.48□□□□□ -1.53
PMP1YCR024C-A LDB19Q12502 818 aa5.44□□□□□ -1.54
PMP1YCR024C-A RSM7P47150 247 aa5.42□□□□□ -1.54
PMP1YCR024C-A GTT3P39996 337 aa5.39□□□□□ -1.55
PMP1YCR024C-A RGA2Q06407 1009 aa5.39□□□□□ -1.55
PMP1YCR024C-A IOC2Q12072 812 aa5.39□□□□□ -1.55
PMP1YCR024C-A AI2P03876 854 aa5.38□□□□□ -1.55
PMP1YCR024C-A ULI1P43604 169 aa5.36□□□□□ -1.55
PMP1YCR024C-A YAH1Q12184 172 aaKnown RBP5.28□□□□□ -1.56
PMP1YCR024C-A MSB4Q12317 492 aa5.27□□□□□ -1.57
PMP1YCR024C-A EAP1P36041 632 aaKnown RBP5.26□□□□□ -1.57
PMP1YCR024C-A BCK2P33306 851 aa5.23□□□□□ -1.57
PMP1YCR024C-A RTG1P32607 177 aa5.22□□□□□ -1.57
PMP1YCR024C-A NCR1Q12200 1170 aa5.22□□□□□ -1.57
PMP1YCR024C-A PSD2P53037 1138 aaKnown RBP5.19□□□□□ -1.58
PMP1YCR024C-A YLR271WQ06152 274 aa5.19□□□□□ -1.58
PMP1YCR024C-A PIB1Q06651 286 aa5.19□□□□□ -1.58
PMP1YCR024C-A TFA1P36100 482 aa5.18□□□□□ -1.58
PMP1YCR024C-A SEC61P32915 480 aa5.16□□□□□ -1.58
PMP1YCR024C-A MRM1P25270 412 aa5.15□□□□□ -1.59
PMP1YCR024C-A YNL035CP53962 389 aaKnown RBP5.15□□□□□ -1.59
PMP1YCR024C-A YOL036WQ08206 761 aa5.15□□□□□ -1.59
PMP1YCR024C-A TRP5P00931 707 aaKnown RBP5.14□□□□□ -1.59
PMP1YCR024C-A SET4P42948 560 aa5.13□□□□□ -1.59
PMP1YCR024C-A TFG1P41895 735 aaPredicted RBP5.12□□□□□ -1.59
PMP1YCR024C-A YMR1P47147 688 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
PMP1YCR024C-A RGA1P39083 1007 aa5.11□□□□□ -1.59
PMP1YCR024C-A CHL1P22516 861 aaPredicted RBP5.1□□□□□ -1.59
PMP1YCR024C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
PMP1YCR024C-A DBP1P24784 617 aaKnown RBP5.08□□□□□ -1.6
PMP1YCR024C-A SAM3Q08986 587 aa5.08□□□□□ -1.6
PMP1YCR024C-A ABP1P15891 592 aaKnown RBP5.06□□□□□ -1.6
PMP1YCR024C-A VMA1P17255 1071 aaKnown RBP5.06□□□□□ -1.6
PMP1YCR024C-A JIP4Q03361 876 aa5.06□□□□□ -1.6
PMP1YCR024C-A RTG3P38165 486 aa5.05□□□□□ -1.6
PMP1YCR024C-A VPS29P38759 282 aa5.05□□□□□ -1.6
PMP1YCR024C-A SAP30P38429 201 aa5.04□□□□□ -1.6
PMP1YCR024C-A XDJ1P39102 459 aa5.04□□□□□ -1.6
PMP1YCR024C-A PRE3P38624 215 aa5.03□□□□□ -1.6
PMP1YCR024C-A SSP1P38871 571 aa5.02□□□□□ -1.61
PMP1YCR024C-A YDL129WQ07555 291 aa5.02□□□□□ -1.61
PMP1YCR024C-A YFR006WP43590 535 aa5.01□□□□□ -1.61
PMP1YCR024C-A DAN4P47179 1161 aa5.01□□□□□ -1.61
PMP1YCR024C-A STS1P38637 319 aa5□□□□□ -1.61
PMP1YCR024C-A DPS1P04802 557 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms