RNA–Protein interactions for RNA: ENST00000573725.1

PRPF8-209, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-209ENST00000573725 NISCHQ9Y2I1 1504 aa15.13■□□□□ 0.01
PRPF8-209ENST00000573725 CCDC180Q9P1Z9 1646 aa13.67□□□□□ -0.22
PRPF8-209ENST00000573725 ABCC9O60706 1549 aa13.64□□□□□ -0.23
PRPF8-209ENST00000573725 RB1CC1Q8TDY2 1594 aa12.98□□□□□ -0.33
PRPF8-209ENST00000573725 NACADO15069 1562 aa12.87□□□□□ -0.35
PRPF8-209ENST00000573725 UNC13AQ9UPW8 1703 aa12.85□□□□□ -0.35
PRPF8-209ENST00000573725 DNAJC5BQ9UF47 199 aa12.85□□□□□ -0.35
PRPF8-209ENST00000573725 AEBP2Q6ZN18 517 aaPredicted RBP12.74□□□□□ -0.37
PRPF8-209ENST00000573725 DCAF8L2P0C7V8 631 aa12.73□□□□□ -0.37
PRPF8-209ENST00000573725 MYO15BQ96JP2 1530 aa12.67□□□□□ -0.38
PRPF8-209ENST00000573725 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
PRPF8-209ENST00000573725 BICRAQ9NZM4 1560 aa12.65□□□□□ -0.38
PRPF8-209ENST00000573725 CHIC1Q5VXU3 224 aa12.56□□□□□ -0.4
PRPF8-209ENST00000573725 ZCCHC6Q5VYS8 1495 aaKnown RBP12.53□□□□□ -0.4
PRPF8-209ENST00000573725 DCAF1Q9Y4B6 1507 aa12.49□□□□□ -0.41
PRPF8-209ENST00000573725 SCRIBQ14160 1630 aa12.43□□□□□ -0.42
PRPF8-209ENST00000573725 SHROOM4Q9ULL8 1493 aa12.39□□□□□ -0.43
PRPF8-209ENST00000573725 CC2D2AQ9P2K1 1620 aa12.37□□□□□ -0.43
PRPF8-209ENST00000573725 EIF4G1Q04637 1599 aaKnown RBP12.3□□□□□ -0.44
PRPF8-209ENST00000573725 CECR2Q9BXF3 1484 aa12.28□□□□□ -0.44
PRPF8-209ENST00000573725 NCAPD3P42695 1498 aa11.86□□□□□ -0.51
PRPF8-209ENST00000573725 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
PRPF8-209ENST00000573725 ATAD2BQ9ULI0 1458 aa11.83□□□□□ -0.52
PRPF8-209ENST00000573725 DNAJC5Q9H3Z4 198 aa11.81□□□□□ -0.52
PRPF8-209ENST00000573725 HMGXB3Q12766 1538 aa11.8□□□□□ -0.52
PRPF8-209ENST00000573725 SMARCA2P51531 1590 aa11.79□□□□□ -0.52
PRPF8-209ENST00000573725 CUX2O14529 1486 aa11.76□□□□□ -0.53
PRPF8-209ENST00000573725 ERCC6Q03468 1493 aa11.76□□□□□ -0.53
PRPF8-209ENST00000573725 BAZ1AQ9NRL2 1556 aaPredicted RBP11.75□□□□□ -0.53
PRPF8-209ENST00000573725 NESP48681 1621 aa11.73□□□□□ -0.53
PRPF8-209ENST00000573725 PEG3Q9GZU2 1588 aa11.72□□□□□ -0.53
PRPF8-209ENST00000573725 BAZ1BQ9UIG0 1483 aaKnown RBP11.7□□□□□ -0.54
PRPF8-209ENST00000573725 MROH2BQ7Z745 1585 aa11.67□□□□□ -0.54
PRPF8-209ENST00000573725 KIF21AQ7Z4S6 1674 aa11.66□□□□□ -0.54
PRPF8-209ENST00000573725 THOC2Q8NI27 1593 aaKnown RBP11.65□□□□□ -0.54
PRPF8-209ENST00000573725 LAMC3Q9Y6N6 1575 aa11.63□□□□□ -0.55
PRPF8-209ENST00000573725 WIZO95785 1651 aa11.58□□□□□ -0.56
PRPF8-209ENST00000573725 PDS5BQ9NTI5 1447 aa11.52□□□□□ -0.57
PRPF8-209ENST00000573725 CADPSQ9ULU8 1353 aa11.48□□□□□ -0.57
PRPF8-209ENST00000573725 MRC2Q9UBG0 1479 aa11.44□□□□□ -0.58
PRPF8-209ENST00000573725 WDR62O43379 1518 aa11.44□□□□□ -0.58
PRPF8-209ENST00000573725 PRDM2Q13029 1718 aa11.4□□□□□ -0.58
PRPF8-209ENST00000573725 CEP164Q9UPV0 1460 aa11.38□□□□□ -0.59
PRPF8-209ENST00000573725 RSF1Q96T23 1441 aaPredicted RBP11.38□□□□□ -0.59
PRPF8-209ENST00000573725 FANCD2Q9BXW9 1451 aa11.38□□□□□ -0.59
PRPF8-209ENST00000573725 TOP2AP11388 1531 aaKnown RBP11.37□□□□□ -0.59
PRPF8-209ENST00000573725 CFTRP13569 1480 aa11.36□□□□□ -0.59
PRPF8-209ENST00000573725 URB2Q14146 1524 aaKnown RBP11.31□□□□□ -0.6
PRPF8-209ENST00000573725 PELP1Q8IZL8 1130 aaKnown RBP11.3□□□□□ -0.6
PRPF8-209ENST00000573725 TRIM41Q8WV44 630 aa11.25□□□□□ -0.61
PRPF8-209ENST00000573725 CCDC88BA6NC98 1476 aa11.24□□□□□ -0.61
PRPF8-209ENST00000573725 OSCARQ8IYS5 282 aa11.19□□□□□ -0.62
PRPF8-209ENST00000573725 ZNF608Q9ULD9 1512 aaPredicted RBP11.18□□□□□ -0.62
PRPF8-209ENST00000573725 TOPBP1Q92547 1522 aa11.17□□□□□ -0.62
PRPF8-209ENST00000573725 RIMBP3CA6NJZ7 1639 aa11.15□□□□□ -0.62
PRPF8-209ENST00000573725 RIMBP3BA6NNM3 1639 aa11.15□□□□□ -0.62
PRPF8-209ENST00000573725 RIMBP3Q9UFD9 1639 aa11.15□□□□□ -0.62
PRPF8-209ENST00000573725 IFT140Q96RY7 1462 aa11.14□□□□□ -0.63
PRPF8-209ENST00000573725 EIF4G3O43432 1585 aaKnown RBP11.14□□□□□ -0.63
PRPF8-209ENST00000573725 DNMBPQ6XZF7 1577 aa11.14□□□□□ -0.63
PRPF8-209ENST00000573725 CHD1O14646 1710 aa11.13□□□□□ -0.63
PRPF8-209ENST00000573725 TARBP1Q13395 1621 aaKnown RBP11.12□□□□□ -0.63
PRPF8-209ENST00000573725 ABCC8Q09428 1581 aa11.11□□□□□ -0.63
PRPF8-209ENST00000573725 PHF23Q9BUL5 403 aaPredicted RBP11.09□□□□□ -0.63
PRPF8-209ENST00000573725 MYT1Q01538 1121 aa11.08□□□□□ -0.64
PRPF8-209ENST00000573725 ARHGEF11O15085 1522 aa11.06□□□□□ -0.64
PRPF8-209ENST00000573725 AQRO60306 1485 aaKnown RBP eCLIP11.05□□□□□ -0.647e-7■■■■□ 19.5
PRPF8-209ENST00000573725 POLA1P09884 1462 aaPredicted RBP11.05□□□□□ -0.64
PRPF8-209ENST00000573725 RAD54L2Q9Y4B4 1467 aa11□□□□□ -0.65
PRPF8-209ENST00000573725 CUX1P39880 1505 aa10.98□□□□□ -0.65
PRPF8-209ENST00000573725 WDR97A6NE52 1622 aa10.98□□□□□ -0.65
PRPF8-209ENST00000573725 SOGA1O94964 1423 aa10.97□□□□□ -0.65
PRPF8-209ENST00000573725 FGD5Q6ZNL6 1462 aa10.97□□□□□ -0.65
PRPF8-209ENST00000573725 PBRM1Q86U86 1689 aa10.95□□□□□ -0.66
PRPF8-209ENST00000573725 ARAP1Q96P48 1450 aa10.95□□□□□ -0.66
PRPF8-209ENST00000573725 TDRD9Q8NDG6 1382 aaKnown RBP10.95□□□□□ -0.66
PRPF8-209ENST00000573725 FBLN2P98095 1184 aa10.94□□□□□ -0.66
PRPF8-209ENST00000573725 CYB5RLQ6IPT4 315 aa10.94□□□□□ -0.66
PRPF8-209ENST00000573725 SNAPC4Q5SXM2 1469 aa10.93□□□□□ -0.66
PRPF8-209ENST00000573725 CLASP1Q7Z460 1538 aa10.93□□□□□ -0.66
PRPF8-209ENST00000573725 MAGI1Q96QZ7 1491 aaPredicted RBP10.9□□□□□ -0.66
PRPF8-209ENST00000573725 SYNJ1O43426 1573 aa10.89□□□□□ -0.67
PRPF8-209ENST00000573725 GRIN2BQ13224 1484 aa10.88□□□□□ -0.67
PRPF8-209ENST00000573725 ABCA5Q8WWZ7 1642 aa10.87□□□□□ -0.67
PRPF8-209ENST00000573725 SYNJ2O15056 1496 aa10.86□□□□□ -0.67
PRPF8-209ENST00000573725 GAPVD1Q14C86 1478 aa10.85□□□□□ -0.67
PRPF8-209ENST00000573725 CHMP7Q8WUX9 453 aaPredicted RBP10.84□□□□□ -0.67
PRPF8-209ENST00000573725 ABCA10Q8WWZ4 1543 aa10.84□□□□□ -0.67
PRPF8-209ENST00000573725 BIVM-ERCC5R4GMW8 1640 aa10.82□□□□□ -0.68
PRPF8-209ENST00000573725 TRHP20396 242 aaPredicted RBP10.81□□□□□ -0.68
PRPF8-209ENST00000573725 SUPT5HO00267 1087 aaKnown RBP10.8□□□□□ -0.68
PRPF8-209ENST00000573725 TOP2BQ02880 1626 aa10.79□□□□□ -0.68
PRPF8-209ENST00000573725 ADAMTS12P58397 1594 aa10.77□□□□□ -0.68
PRPF8-209ENST00000573725 ERCC6L2Q5T890 1561 aa10.77□□□□□ -0.68
PRPF8-209ENST00000573725 GRIN2AQ12879 1464 aa10.76□□□□□ -0.69
PRPF8-209ENST00000573725 CEP170Q5SW79 1584 aa10.76□□□□□ -0.69
PRPF8-209ENST00000573725 WRNQ14191 1432 aaPredicted RBP eCLIP10.75□□□□□ -0.69
PRPF8-209ENST00000573725 SENP3Q9H4L4 574 aaPredicted RBP10.75□□□□□ -0.69
PRPF8-209ENST00000573725 SHROOM2Q13796 1616 aa10.74□□□□□ -0.69
PRPF8-209ENST00000573725 HRCP23327 699 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms