RNA–Protein interactions for RNA: ENST00000573725.1

PRPF8-209, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-209ENST00000573725 AARSP49588 968 aaKnown RBP eCLIP7,19□□□□□ -1,262e-8■■■■■ 46,4
PRPF8-209ENST00000573725 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6,91□□□□□ -1,31e-11■■■■■ 45,2
PRPF8-209ENST00000573725 FXR2P51116 673 aaKnown RBP eCLIP6,82□□□□□ -1,329e-11■■■■■ 41,8
PRPF8-209ENST00000573725 PUM2Q8TB72 1066 aaKnown RBP eCLIP6,07□□□□□ -1,447e-13■■■■■ 33,2
PRPF8-209ENST00000573725 FMR1Q06787 632 aaKnown RBP eCLIP7,84□□□□□ -1,158e-8■■■■■ 32,6
PRPF8-209ENST00000573725 FXR1P51114 621 aaKnown RBP eCLIP7,41□□□□□ -1,223e-7■■■■■ 28,1
PRPF8-209ENST00000573725 SF3B4Q15427 424 aaKnown RBP eCLIP6,64□□□□□ -1,352e-10■■■■□ 24
PRPF8-209ENST00000573725 EFTUD2Q15029 972 aaKnown RBP eCLIP6,57□□□□□ -1,366e-7■■■■□ 22,4
PRPF8-209ENST00000573725 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6,99□□□□□ -1,292e-6■■■■□ 22
PRPF8-209ENST00000573725 SF3A3Q12874 501 aaKnown RBP eCLIP6,75□□□□□ -1,336e-7■■■■□ 21,8
PRPF8-209ENST00000573725 G3BP1Q13283 466 aaKnown RBP eCLIP7,32□□□□□ -1,241e-7■■■■□ 19,9
PRPF8-209ENST00000573725 AQRO60306 1485 aaKnown RBP eCLIP11,05□□□□□ -0,647e-7■■■■□ 19,5
PRPF8-209ENST00000573725 RPS3P23396 243 aaKnown RBP eCLIP6,2□□□□□ -1,421e-6■■■□□ 16,9
PRPF8-209ENST00000573725 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5,44□□□□□ -1,541e-6■■■□□ 15,6
PRPF8-209ENST00000573725 BUD13Q9BRD0 619 aaKnown RBP eCLIP7,09□□□□□ -1,277e-14■■□□□ 13,9
PRPF8-209ENST00000573725 YBX3P16989 372 aaKnown RBP eCLIP8,3□□□□□ -1,081e-6■■□□□ 13,7
PRPF8-209ENST00000573725 DDX24Q9GZR7 859 aaKnown RBP eCLIP7,16□□□□□ -1,262e-7■■□□□ 13,6
PRPF8-209ENST00000573725 U2AF2P26368 475 aaKnown RBP eCLIP7,76□□□□□ -1,179e-8■■□□□ 11,4
PRPF8-209ENST00000573725 PUM1Q14671 1186 aaKnown RBP eCLIP6,52□□□□□ -1,377e-6■□□□□ 10,1
PRPF8-209ENST00000573725 SND1Q7KZF4 910 aaKnown RBP eCLIP6,97□□□□□ -1,294e-7■□□□□ 9,8
PRPF8-209ENST00000573725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9,35□□□□□ -0,911e-6■□□□□ 9,1
PRPF8-209ENST00000573725 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7,35□□□□□ -1,232e-8■□□□□ 8,2
Retrieved 22 of 22 RNA–protein pairs in 5,9 ms