RNA–Protein interactions for RNA: YPR138C

MEP3, Transcript of Ammonium permease of high capacity and low affinity, yeast

Gene MEP3, Length 1,470 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MEP3	YPR138C	QCR6	P00127	147 aa		10.69	□□□□□ -0.7
MEP3	YPR138C	DIT2	P21595	489 aa		10.69	□□□□□ -0.7
MEP3	YPR138C	GLC3	P32775	704 aa		10.69	□□□□□ -0.7
MEP3	YPR138C	STV1	P37296	890 aa		10.69	□□□□□ -0.7
MEP3	YPR138C	MAL33	P38157	468 aa		10.69	□□□□□ -0.7
MEP3	YPR138C	RFC5	P38251	354 aa		10.69	□□□□□ -0.7
MEP3	YPR138C	RPS0B	P46654	252 aa	Known RBP	10.69	□□□□□ -0.7
MEP3	YPR138C	SQS1	P53866	767 aa	Known RBP	10.69	□□□□□ -0.7
MEP3	YPR138C	SWI4	P25302	1093 aa	Known RBP	10.68	□□□□□ -0.7
MEP3	YPR138C	RDS1	P25611	832 aa		10.68	□□□□□ -0.7
MEP3	YPR138C	MAL31	P38156	614 aa		10.68	□□□□□ -0.7
MEP3	YPR138C	RPN10	P38886	268 aa	Known RBP	10.68	□□□□□ -0.7
MEP3	YPR138C	KRE33	P53914	1056 aa	Known RBP	10.68	□□□□□ -0.7
MEP3	YPR138C	TRM44	Q02648	567 aa	Known RBP	10.68	□□□□□ -0.7
MEP3	YPR138C	SEN54	Q02825	467 aa	Predicted RBP	10.68	□□□□□ -0.7
MEP3	YPR138C	PGI1	P12709	554 aa	Known RBP	10.68	□□□□□ -0.7
MEP3	YPR138C	RNR3	P21672	869 aa	Known RBP	10.68	□□□□□ -0.7
MEP3	YPR138C	PRE8	P23639	250 aa		10.68	□□□□□ -0.7
MEP3	YPR138C	CSM2	P40465	213 aa		10.68	□□□□□ -0.7
MEP3	YPR138C	TIM50	Q02776	476 aa		10.68	□□□□□ -0.7
MEP3	YPR138C	SKG3	Q06315	1026 aa		10.68	□□□□□ -0.7
MEP3	YPR138C	SRM1	P21827	482 aa		10.67	□□□□□ -0.7
MEP3	YPR138C	ASF1	P32447	279 aa		10.67	□□□□□ -0.7
MEP3	YPR138C	SLX5	P32828	619 aa	Known RBP	10.67	□□□□□ -0.7
MEP3	YPR138C	PES4	P39684	611 aa		10.67	□□□□□ -0.7
MEP3	YPR138C	VPS8	P39702	1274 aa		10.67	□□□□□ -0.7
MEP3	YPR138C	RVS167	P39743	482 aa	Known RBP	10.67	□□□□□ -0.7
MEP3	YPR138C	RSM25	P40496	264 aa		10.67	□□□□□ -0.7
MEP3	YPR138C	VPS4	P52917	437 aa		10.67	□□□□□ -0.7
MEP3	YPR138C	RPT6	Q01939	405 aa	Known RBP	10.67	□□□□□ -0.7
MEP3	YPR138C	YOR111W	Q99210	232 aa		10.67	□□□□□ -0.7
MEP3	YPR138C	SSA1	P10591	642 aa	Known RBP	10.66	□□□□□ -0.7
MEP3	YPR138C	KIN1	P13185	1064 aa		10.66	□□□□□ -0.7
MEP3	YPR138C	GAP1	P19145	602 aa	Predicted RBP	10.66	□□□□□ -0.7
MEP3	YPR138C	HCA4	P20448	770 aa	Known RBP	10.66	□□□□□ -0.7
MEP3	YPR138C	CCT5	P40413	562 aa	Known RBP	10.66	□□□□□ -0.7
MEP3	YPR138C	YGR117C	P53270	476 aa		10.66	□□□□□ -0.7
MEP3	YPR138C	FAR11	P53917	953 aa		10.66	□□□□□ -0.7
MEP3	YPR138C	GDE1	Q02979	1223 aa		10.66	□□□□□ -0.7
MEP3	YPR138C	CLF1	Q12309	687 aa	Predicted RBP	10.66	□□□□□ -0.7
MEP3	YPR138C	YLR278C	Q05854	1341 aa		10.66	□□□□□ -0.7
MEP3	YPR138C	FRS2	P15625	503 aa	Known RBP	10.65	□□□□□ -0.7
MEP3	YPR138C	RPN12	P32496	274 aa		10.65	□□□□□ -0.7
MEP3	YPR138C	RXT2	P38255	430 aa		10.65	□□□□□ -0.7
MEP3	YPR138C	FET4	P40988	552 aa		10.65	□□□□□ -0.7
MEP3	YPR138C	HSP82	P02829	709 aa	Known RBP	10.64	□□□□□ -0.71
MEP3	YPR138C	ADP1	P25371	1049 aa		10.64	□□□□□ -0.71
MEP3	YPR138C	KNS1	P32350	737 aa	Predicted RBP	10.64	□□□□□ -0.71
MEP3	YPR138C	RFT1	P38206	574 aa	Predicted RBP	10.64	□□□□□ -0.71
MEP3	YPR138C	SLI15	P38283	698 aa		10.64	□□□□□ -0.71
MEP3	YPR138C	YDL124W	Q07551	312 aa	Known RBP	10.64	□□□□□ -0.71
MEP3	YPR138C	ETT1	Q08421	412 aa	Known RBP	10.64	□□□□□ -0.71
MEP3	YPR138C	APC11	Q12157	165 aa		10.64	□□□□□ -0.71
MEP3	YPR138C	DDP1	Q99321	188 aa	Known RBP	10.64	□□□□□ -0.71
MEP3	YPR138C	FKS1	P38631	1876 aa	Known RBP	10.64	□□□□□ -0.71
MEP3	YPR138C	TUS1	Q06412	1307 aa		10.64	□□□□□ -0.71
MEP3	YPR138C	RPL8B	P29453	256 aa	Known RBP	10.63	□□□□□ -0.71
MEP3	YPR138C	LEO1	P38439	464 aa		10.63	□□□□□ -0.71
MEP3	YPR138C	SNU71	P53207	620 aa	Known RBP	10.63	□□□□□ -0.71
MEP3	YPR138C	PIL1	P53252	339 aa	Known RBP	10.63	□□□□□ -0.71
MEP3	YPR138C	DCS2	Q12123	353 aa		10.63	□□□□□ -0.71
MEP3	YPR138C	CDC6	P09119	513 aa		10.62	□□□□□ -0.71
MEP3	YPR138C	HPR1	P17629	752 aa	Known RBP	10.62	□□□□□ -0.71
MEP3	YPR138C	SRP54	P20424	541 aa	Known RBP	10.62	□□□□□ -0.71
MEP3	YPR138C	RAD53	P22216	821 aa		10.62	□□□□□ -0.71
MEP3	YPR138C	CHS3	P29465	1165 aa		10.62	□□□□□ -0.71
MEP3	YPR138C	RTG2	P32608	588 aa	Known RBP	10.62	□□□□□ -0.71
MEP3	YPR138C	CST26	P38226	397 aa		10.62	□□□□□ -0.71
MEP3	YPR138C	PCI8	P40512	444 aa		10.62	□□□□□ -0.71
MEP3	YPR138C	FOL1	P53848	824 aa		10.62	□□□□□ -0.71
MEP3	YPR138C	GET3	Q12154	354 aa	Known RBP	10.62	□□□□□ -0.71
MEP3	YPR138C	PMA1	P05030	918 aa	Known RBP	10.61	□□□□□ -0.71
MEP3	YPR138C	TOM71	P38825	639 aa	Known RBP	10.61	□□□□□ -0.71
MEP3	YPR138C	VPS30	Q02948	557 aa		10.61	□□□□□ -0.71
MEP3	YPR138C	CEX1	Q12453	761 aa		10.61	□□□□□ -0.71
MEP3	YPR138C	MET6	P05694	767 aa	Known RBP	10.61	□□□□□ -0.71
MEP3	YPR138C	VPS1	P21576	704 aa	Known RBP	10.61	□□□□□ -0.71
MEP3	YPR138C	YBL028C	P38202	106 aa		10.61	□□□□□ -0.71
MEP3	YPR138C	KEL1	P38853	1164 aa	Known RBP	10.61	□□□□□ -0.71
MEP3	YPR138C	EMP47	P43555	445 aa		10.61	□□□□□ -0.71
MEP3	YPR138C	YDR341C	Q05506	607 aa	Known RBP	10.61	□□□□□ -0.71
MEP3	YPR138C	DSE3	Q08729	430 aa		10.61	□□□□□ -0.71
MEP3	YPR138C	CBP1	P07252	654 aa		10.6	□□□□□ -0.71
MEP3	YPR138C	NUC1	P08466	329 aa		10.6	□□□□□ -0.71
MEP3	YPR138C	SPB4	P25808	606 aa	Predicted RBP	10.6	□□□□□ -0.71
MEP3	YPR138C	DID4	P36108	232 aa		10.6	□□□□□ -0.71
MEP3	YPR138C	NIT1	P40447	199 aa		10.6	□□□□□ -0.71
MEP3	YPR138C	YGL138C	P53122	345 aa		10.6	□□□□□ -0.71
MEP3	YPR138C	NAF1	P53919	492 aa	Known RBP	10.6	□□□□□ -0.71
MEP3	YPR138C	MDM1	Q01846	1127 aa		10.6	□□□□□ -0.71
MEP3	YPR138C	ACE2	P21192	770 aa		10.59	□□□□□ -0.71
MEP3	YPR138C	RKM3	P38222	552 aa		10.59	□□□□□ -0.71
MEP3	YPR138C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	10.59	□□□□□ -0.71	not detected
MEP3	YPR138C	CIT1	P00890	479 aa		10.58	□□□□□ -0.72
MEP3	YPR138C	TUB2	P02557	457 aa	Known RBP	10.58	□□□□□ -0.72
MEP3	YPR138C	THS1	P04801	734 aa	Known RBP	10.58	□□□□□ -0.72
MEP3	YPR138C	HXK1	P04806	485 aa	Known RBP	10.58	□□□□□ -0.72
MEP3	YPR138C	YPT11	P48559	417 aa		10.58	□□□□□ -0.72
MEP3	YPR138C	RGP1	P16664	663 aa		10.57	□□□□□ -0.72
MEP3	YPR138C	MCM3	P24279	971 aa	Known RBP	10.57	□□□□□ -0.72

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms