Protein–RNA interactions for Protein: P46654

RPS0B, 40S ribosomal protein S0-B, yeastyeast

Known RBP Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS0BP46654 SSA3YBL075C 1950 nt17.83■□□□□ 0.44
RPS0BP46654 NSR1YGR159C 1245 nt17.4■□□□□ 0.38
RPS0BP46654 YML009W-BYML009W-B 477 nt17.34■□□□□ 0.37
RPS0BP46654 NOP1YDL014W 984 nt16.93■□□□□ 0.3
RPS0BP46654 FPS1YLL043W 2010 nt15.55■□□□□ 0.08
RPS0BP46654 SSA1YAL005C 1929 nt15.52■□□□□ 0.07
RPS0BP46654 MDJ1YFL016C 1536 nt15.5■□□□□ 0.07
RPS0BP46654 NVJ2YPR091C 2313 nt15.46■□□□□ 0.07
RPS0BP46654 PAC11YDR488C 1602 nt15.4■□□□□ 0.06
RPS0BP46654 YKL036CYKL036C 393 nt15.28■□□□□ 0.04
RPS0BP46654 SSA4YER103W 1929 nt14.66□□□□□ -0.06
RPS0BP46654 SRX1YKL086W 384 nt14.61□□□□□ -0.07
RPS0BP46654 Q0297Q0297 156 nt14.53□□□□□ -0.08
RPS0BP46654 YJL027CYJL027C 417 nt14.51□□□□□ -0.09
RPS0BP46654 BDF1YLR399C 2061 nt14.36□□□□□ -0.11
RPS0BP46654 UME6YDR207C 2511 nt14.19□□□□□ -0.14
RPS0BP46654 SPT5YML010W 3192 nt14.16□□□□□ -0.14
RPS0BP46654 TAT1YBR069C 1860 nt14.12□□□□□ -0.15
RPS0BP46654 YCR051WYCR051W 669 nt13.93□□□□□ -0.18
RPS0BP46654 Q0182Q0182 405 nt13.87□□□□□ -0.19
RPS0BP46654 PUT4YOR348C 1884 nt13.68□□□□□ -0.22
RPS0BP46654 RPM1RPM1 483 nt13.67□□□□□ -0.22
RPS0BP46654 SCS3YGL126W 1143 nt13.64□□□□□ -0.23
RPS0BP46654 DBP2YNL112W 1641 nt13.46□□□□□ -0.25
RPS0BP46654 YBR190WYBR190W 312 nt13.41□□□□□ -0.26
RPS0BP46654 MCH5YOR306C 1566 nt13.31□□□□□ -0.28
RPS0BP46654 TRN1tP(UGG)A 72 nt13.26□□□□□ -0.29
RPS0BP46654 SUF9tP(UGG)F 72 nt13.26□□□□□ -0.29
RPS0BP46654 SUF8tP(UGG)H 72 nt13.26□□□□□ -0.29
RPS0BP46654 tP(UGG)LtP(UGG)L 72 nt13.26□□□□□ -0.29
RPS0BP46654 SUF7tP(UGG)M 72 nt13.26□□□□□ -0.29
RPS0BP46654 tP(UGG)N1tP(UGG)N1 72 nt13.26□□□□□ -0.29
RPS0BP46654 tP(UGG)N2tP(UGG)N2 72 nt13.26□□□□□ -0.29
RPS0BP46654 tP(UGG)O1tP(UGG)O1 72 nt13.26□□□□□ -0.29
RPS0BP46654 SUF11tP(UGG)O2 72 nt13.26□□□□□ -0.29
RPS0BP46654 CCC1YLR220W 969 nt13.22□□□□□ -0.29
RPS0BP46654 RTC3YHR087W 336 nt13.21□□□□□ -0.29
RPS0BP46654 BSC6YOL137W 1494 nt13.16□□□□□ -0.3
RPS0BP46654 BOR1YNL275W 1731 nt13.15□□□□□ -0.3
RPS0BP46654 YOL085CYOL085C 342 nt13.11□□□□□ -0.31
RPS0BP46654 RVS167YDR388W 1449 nt13.1□□□□□ -0.31
RPS0BP46654 GUT2YIL155C 1950 nt13.1□□□□□ -0.31
RPS0BP46654 RPP1BYDL130W 321 nt13.07□□□□□ -0.32
RPS0BP46654 POA1YBR022W 534 nt13.03□□□□□ -0.32
RPS0BP46654 PKP1YIL042C 1185 nt12.92□□□□□ -0.34
RPS0BP46654 ARE1YCR048W 1833 nt12.81□□□□□ -0.36
RPS0BP46654 PCH2YBR186W 1695 nt12.75□□□□□ -0.37
RPS0BP46654 SSN3YPL042C 1668 nt12.68□□□□□ -0.38
RPS0BP46654 ALG12YNR030W 1656 nt12.67□□□□□ -0.38
RPS0BP46654 YHR049C-AYHR049C-A 297 nt12.64□□□□□ -0.39
RPS0BP46654 MEP2YNL142W 1500 nt12.59□□□□□ -0.39
RPS0BP46654 YBR220CYBR220C 1683 nt12.59□□□□□ -0.39
RPS0BP46654 URN1YPR152C 1398 nt12.56□□□□□ -0.4
RPS0BP46654 SCJ1YMR214W 1134 nt12.55□□□□□ -0.4
RPS0BP46654 SCR1SCR1 522 nt12.52□□□□□ -0.41
RPS0BP46654 tP(UGG)O3tP(UGG)O3 72 nt12.5□□□□□ -0.41
RPS0BP46654 PIB2YGL023C 1908 nt12.5□□□□□ -0.41
RPS0BP46654 FRE6YLL051C 2139 nt12.5□□□□□ -0.41
RPS0BP46654 SEC11YIR022W 504 nt12.47□□□□□ -0.41
RPS0BP46654 GID7YCL039W 2238 nt12.46□□□□□ -0.42
RPS0BP46654 DED1YOR204W 1815 nt12.46□□□□□ -0.42
RPS0BP46654 YJL225CYJL225C 5277 nt12.44□□□□□ -0.42
RPS0BP46654 MOT3YMR070W 1473 nt12.44□□□□□ -0.42
RPS0BP46654 HSL7YBR133C 2484 nt12.42□□□□□ -0.42
RPS0BP46654 PET122YER153C 765 nt12.42□□□□□ -0.42
RPS0BP46654 SHR5YOL110W 714 nt12.42□□□□□ -0.42
RPS0BP46654 HEL2YDR266C 1920 nt12.35□□□□□ -0.43
RPS0BP46654 MET2YNL277W 1461 nt12.34□□□□□ -0.43
RPS0BP46654 DCW1YKL046C 1350 nt12.31□□□□□ -0.44
RPS0BP46654 NPP1YCR026C 2229 nt12.31□□□□□ -0.44
RPS0BP46654 YAT1YAR035W 2064 nt12.31□□□□□ -0.44
RPS0BP46654 SFP1YLR403W 2052 nt12.31□□□□□ -0.44
RPS0BP46654 BUD23YCR047C 828 nt12.25□□□□□ -0.45
RPS0BP46654 NAR1YNL240C 1476 nt12.24□□□□□ -0.45
RPS0BP46654 RDN25-1RDN25-1 3396 nt12.23□□□□□ -0.45
RPS0BP46654 RDN25-2RDN25-2 3396 nt12.23□□□□□ -0.45
RPS0BP46654 RPN10YHR200W 807 nt12.2□□□□□ -0.46
RPS0BP46654 LCB1YMR296C 1677 nt12.19□□□□□ -0.46
RPS0BP46654 YMR090WYMR090W 684 nt12.19□□□□□ -0.46
RPS0BP46654 RTF1YGL244W 1677 nt12.17□□□□□ -0.46
RPS0BP46654 CMP2YML057W 1815 nt12.17□□□□□ -0.46
RPS0BP46654 ATS1YAL020C 1002 nt12.17□□□□□ -0.46
RPS0BP46654 YDJ1YNL064C 1230 nt12.15□□□□□ -0.46
RPS0BP46654 ESBP6YNL125C 2022 nt12.15□□□□□ -0.47
RPS0BP46654 BSP1YPR171W 1731 nt12.14□□□□□ -0.47
RPS0BP46654 HSP60YLR259C 1719 nt12.14□□□□□ -0.47
RPS0BP46654 SDH1YKL148C 1923 nt12.09□□□□□ -0.47
RPS0BP46654 EMI2YDR516C 1503 nt12.09□□□□□ -0.47
RPS0BP46654 YHL050CYHL050C 2094 nt12.06□□□□□ -0.48
RPS0BP46654 RRN5YLR141W 1092 nt12.06□□□□□ -0.48
RPS0BP46654 DEP1YAL013W 1218 nt12.05□□□□□ -0.48
RPS0BP46654 SAH1YER043C 1350 nt12.05□□□□□ -0.48
RPS0BP46654 SPT8YLR055C 1809 nt12.04□□□□□ -0.48
RPS0BP46654 PTK1YKL198C 1989 nt12.02□□□□□ -0.49
RPS0BP46654 UBX6YJL048C 1191 nt12.01□□□□□ -0.49
RPS0BP46654 OPI9YLR338W 858 nt12.01□□□□□ -0.49
RPS0BP46654 YNL208WYNL208W 600 nt11.97□□□□□ -0.49
RPS0BP46654 ILV2YMR108W 2064 nt11.97□□□□□ -0.49
RPS0BP46654 DTR1YBR180W 1719 nt11.91□□□□□ -0.5
RPS0BP46654 YGR021WYGR021W 873 nt11.9□□□□□ -0.5
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms