RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C IMP2'P32351 346 aa9.31□□□□□ -0.92
LSP1YPL004C MCD4P36051 919 aa9.31□□□□□ -0.92
LSP1YPL004C SPO22P40511 975 aa9.31□□□□□ -0.92
LSP1YPL004C FOL1P53848 824 aa9.31□□□□□ -0.92
LSP1YPL004C RPT6Q01939 405 aaKnown RBP9.31□□□□□ -0.92
LSP1YPL004C YML037CQ03703 340 aa9.31□□□□□ -0.92
LSP1YPL004C MYO5Q04439 1219 aaKnown RBP9.31□□□□□ -0.92
LSP1YPL004C YLR225CQ05948 407 aaKnown RBP9.31□□□□□ -0.92
LSP1YPL004C UBX5Q06682 500 aa9.31□□□□□ -0.92
LSP1YPL004C CLF1Q12309 687 aaPredicted RBP9.31□□□□□ -0.92
LSP1YPL004C SAM2P19358 384 aaKnown RBP9.3□□□□□ -0.92
LSP1YPL004C ACE2P21192 770 aa9.3□□□□□ -0.92
LSP1YPL004C MAK31P23059 88 aa9.3□□□□□ -0.92
LSP1YPL004C UBP9P39967 754 aa9.3□□□□□ -0.92
LSP1YPL004C AIM9P40053 627 aaKnown RBP9.3□□□□□ -0.92
LSP1YPL004C EST2Q06163 884 aa9.3□□□□□ -0.92
LSP1YPL004C TFC6Q06339 672 aa9.3□□□□□ -0.92
LSP1YPL004C PGA3Q12746 312 aaKnown RBP9.3□□□□□ -0.92
LSP1YPL004C NUC1P08466 329 aa9.29□□□□□ -0.92
LSP1YPL004C RPC31P17890 251 aa9.29□□□□□ -0.92
LSP1YPL004C CDC60P26637 1090 aaKnown RBP9.29□□□□□ -0.92
LSP1YPL004C RPL8BP29453 256 aaKnown RBP9.29□□□□□ -0.92
LSP1YPL004C ECM23Q02710 187 aa9.29□□□□□ -0.92
LSP1YPL004C VPS30Q02948 557 aa9.29□□□□□ -0.92
LSP1YPL004C TY3A-GQ12173 290 aa9.29□□□□□ -0.92
LSP1YPL004C TY3A-IQ99219 290 aa9.29□□□□□ -0.92
LSP1YPL004C MYO1P08964 1928 aa9.29□□□□□ -0.92
LSP1YPL004C TRL1P09880 827 aaKnown RBP9.28□□□□□ -0.92
LSP1YPL004C ALG2P43636 503 aa9.28□□□□□ -0.92
LSP1YPL004C SGD1Q06132 899 aa9.28□□□□□ -0.92
LSP1YPL004C ESF1Q06344 628 aaKnown RBP9.28□□□□□ -0.92
LSP1YPL004C RAD18P10862 487 aa9.27□□□□□ -0.93
LSP1YPL004C GPB2P39717 880 aa9.27□□□□□ -0.93
LSP1YPL004C VMA2P16140 517 aaKnown RBP9.26□□□□□ -0.93
LSP1YPL004C SRP54P20424 541 aaKnown RBP9.26□□□□□ -0.93
LSP1YPL004C PKC1P24583 1151 aa9.26□□□□□ -0.93
LSP1YPL004C VPS45P38932 577 aa9.26□□□□□ -0.93
LSP1YPL004C CSM2P40465 213 aa9.26□□□□□ -0.93
LSP1YPL004C ALD6P54115 500 aaKnown RBP9.26□□□□□ -0.93
LSP1YPL004C MAL31P38156 614 aa9.25□□□□□ -0.93
LSP1YPL004C PHO88P38264 188 aaPredicted RBP9.25□□□□□ -0.93
LSP1YPL004C YAF9P53930 226 aa9.25□□□□□ -0.93
LSP1YPL004C EUG1P32474 517 aa9.24□□□□□ -0.93
LSP1YPL004C FBP26P32604 452 aa9.24□□□□□ -0.93
LSP1YPL004C MDM1Q01846 1127 aa9.24□□□□□ -0.93
LSP1YPL004C DSE3Q08729 430 aa9.24□□□□□ -0.93
LSP1YPL004C SRS2P12954 1174 aa9.23□□□□□ -0.93
LSP1YPL004C RNR3P21672 869 aaKnown RBP9.23□□□□□ -0.93
LSP1YPL004C SIS2P36024 562 aa9.23□□□□□ -0.93
LSP1YPL004C YKR018CP36114 725 aa9.23□□□□□ -0.93
LSP1YPL004C TOM71P38825 639 aaKnown RBP9.23□□□□□ -0.93
LSP1YPL004C VID28P40547 921 aa9.23□□□□□ -0.93
LSP1YPL004C KRI1P42846 591 aaKnown RBP9.23□□□□□ -0.93
LSP1YPL004C ATG1P53104 897 aa9.23□□□□□ -0.93
LSP1YPL004C UTP4Q06679 776 aaKnown RBP9.23□□□□□ -0.93
LSP1YPL004C CDC19P00549 500 aaKnown RBP9.22□□□□□ -0.93
LSP1YPL004C SEC20P28791 383 aa9.22□□□□□ -0.93
LSP1YPL004C TGL1P34163 548 aa9.22□□□□□ -0.93
LSP1YPL004C OPY1P38271 328 aa9.22□□□□□ -0.93
LSP1YPL004C LSB1P53281 241 aa9.22□□□□□ -0.93
LSP1YPL004C TMA64Q04600 565 aaKnown RBP9.22□□□□□ -0.93
LSP1YPL004C YOR111WQ99210 232 aa9.22□□□□□ -0.93
LSP1YPL004C ECM29P38737 1868 aa9.21□□□□□ -0.93
LSP1YPL004C MATALPHA2P0CY08 210 aa9.21□□□□□ -0.94
LSP1YPL004C HMLALPHA2P0CY09 210 aa9.21□□□□□ -0.94
LSP1YPL004C MXR1P40029 184 aa9.21□□□□□ -0.94
LSP1YPL004C SPH1Q06160 661 aa9.21□□□□□ -0.94
LSP1YPL004C SUE1Q06524 206 aa9.21□□□□□ -0.94
LSP1YPL004C CSC1Q06538 782 aa9.21□□□□□ -0.94
LSP1YPL004C VPS13Q07878 3144 aa9.2□□□□□ -0.94
LSP1YPL004C RNR2P09938 399 aaKnown RBP9.2□□□□□ -0.94
LSP1YPL004C UTR4P32626 227 aa9.2□□□□□ -0.94
LSP1YPL004C AKR1P39010 764 aa9.2□□□□□ -0.94
LSP1YPL004C YKE2P52553 114 aa9.2□□□□□ -0.94
LSP1YPL004C YGR125WP53273 1036 aa9.2□□□□□ -0.94
LSP1YPL004C SAM1P10659 382 aaKnown RBP9.19□□□□□ -0.94
LSP1YPL004C BMH2P34730 273 aaKnown RBP9.19□□□□□ -0.94
LSP1YPL004C YIR014WP40570 242 aa9.19□□□□□ -0.94
LSP1YPL004C GUD1Q07729 489 aa9.19□□□□□ -0.94
LSP1YPL004C RPL8AP17076 256 aaKnown RBP9.18□□□□□ -0.94
LSP1YPL004C VPS29P38759 282 aa9.18□□□□□ -0.94
LSP1YPL004C PSF2P40359 213 aa9.18□□□□□ -0.94
LSP1YPL004C TPM2P40414 161 aa9.18□□□□□ -0.94
LSP1YPL004C FMS1P50264 508 aa9.18□□□□□ -0.94
LSP1YPL004C UBP10P53874 792 aaPredicted RBP9.18□□□□□ -0.94
LSP1YPL004C ARP5P53946 755 aa9.18□□□□□ -0.94
LSP1YPL004C YDR341CQ05506 607 aaKnown RBP9.18□□□□□ -0.94
LSP1YPL004C DUS4Q06063 367 aa9.18□□□□□ -0.94
LSP1YPL004C YLR407WQ06070 228 aa9.18□□□□□ -0.94
LSP1YPL004C VIP1Q06685 1146 aaKnown RBP9.18□□□□□ -0.94
LSP1YPL004C MET6P05694 767 aaKnown RBP9.17□□□□□ -0.94
LSP1YPL004C PRE10P21242 288 aaKnown RBP RIP-Chip data9.17□□□□□ -0.94not detected
LSP1YPL004C SDH2P21801 266 aa9.17□□□□□ -0.94
LSP1YPL004C SWI4P25302 1093 aaKnown RBP9.17□□□□□ -0.94
LSP1YPL004C RGT1P32862 1170 aa9.17□□□□□ -0.94
LSP1YPL004C MCR1P36060 302 aaKnown RBP9.17□□□□□ -0.94
LSP1YPL004C CCT3P39077 534 aaKnown RBP9.17□□□□□ -0.94
LSP1YPL004C PCI8P40512 444 aa9.17□□□□□ -0.94
LSP1YPL004C ASE1P50275 885 aa9.17□□□□□ -0.94
LSP1YPL004C LIF1P53150 421 aa9.17□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 61.6 ms