RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W MYO3P36006 1272 aa12.58□□□□□ -0.4
PRE6YOL038W FPR3P38911 411 aaKnown RBP12.58□□□□□ -0.4
PRE6YOL038W MXR1P40029 184 aa12.58□□□□□ -0.4
PRE6YOL038W PTK2P47116 818 aaKnown RBP12.58□□□□□ -0.4
PRE6YOL038W ENP2P48234 707 aaKnown RBP12.58□□□□□ -0.4
PRE6YOL038W MET1P36150 593 aa12.57□□□□□ -0.4
PRE6YOL038W GPB2P39717 880 aa12.57□□□□□ -0.4
PRE6YOL038W CLA4P48562 842 aa12.57□□□□□ -0.4
PRE6YOL038W TMA64Q04600 565 aaKnown RBP12.57□□□□□ -0.4
PRE6YOL038W SAM1P10659 382 aaKnown RBP12.56□□□□□ -0.4
PRE6YOL038W PHO88P38264 188 aaPredicted RBP12.56□□□□□ -0.4
PRE6YOL038W RRP8P38961 392 aaKnown RBP12.56□□□□□ -0.4
PRE6YOL038W STM1P39015 273 aaKnown RBP12.56□□□□□ -0.4
PRE6YOL038W VPS8P39702 1274 aa12.56□□□□□ -0.4
PRE6YOL038W UBP9P39967 754 aa12.56□□□□□ -0.4
PRE6YOL038W SCS3P53012 380 aa12.56□□□□□ -0.4
PRE6YOL038W SOL4P53315 255 aa12.56□□□□□ -0.4
PRE6YOL038W ALD6P54115 500 aaKnown RBP12.56□□□□□ -0.4
PRE6YOL038W UFD2P54860 961 aa12.56□□□□□ -0.4
PRE6YOL038W SUE1Q06524 206 aa12.56□□□□□ -0.4
PRE6YOL038W RIM20Q12033 661 aa12.56□□□□□ -0.4
PRE6YOL038W MOT1P32333 1867 aa12.56□□□□□ -0.4
PRE6YOL038W RIT1P23796 513 aa12.55□□□□□ -0.4
PRE6YOL038W TGL1P34163 548 aa12.55□□□□□ -0.4
PRE6YOL038W SHP1P34223 423 aa12.55□□□□□ -0.4
PRE6YOL038W BUL2Q03758 920 aaKnown RBP12.55□□□□□ -0.4
PRE6YOL038W ECM30Q06673 1274 aa12.55□□□□□ -0.4
PRE6YOL038W MET7Q08645 548 aa12.55□□□□□ -0.4
PRE6YOL038W UIP5P36137 443 aa12.54□□□□□ -0.4
PRE6YOL038W MDM20Q12387 796 aaKnown RBP12.54□□□□□ -0.4
PRE6YOL038W YDR461C-AQ2V2P7 80 aa12.54□□□□□ -0.4
PRE6YOL038W ANP1P32629 500 aa12.53□□□□□ -0.4
PRE6YOL038W YKR023WP36119 530 aaKnown RBP12.53□□□□□ -0.4
PRE6YOL038W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.53□□□□□ -0.4not detected
PRE6YOL038W RGT1P32862 1170 aa12.52□□□□□ -0.41
PRE6YOL038W AAP1P37898 856 aaKnown RBP12.52□□□□□ -0.41
PRE6YOL038W NDT80P38830 627 aa12.52□□□□□ -0.41
PRE6YOL038W AIM21P40563 679 aa12.52□□□□□ -0.41
PRE6YOL038W YGL039WP53183 348 aaKnown RBP12.52□□□□□ -0.41
PRE6YOL038W MAM3Q12296 706 aa12.52□□□□□ -0.41
PRE6YOL038W UBR2Q07963 1872 aa12.52□□□□□ -0.41
PRE6YOL038W DBP1P24784 617 aaKnown RBP12.51□□□□□ -0.41
PRE6YOL038W SRP40P32583 406 aaPredicted RBP12.51□□□□□ -0.41
PRE6YOL038W YJR107WP47145 328 aa12.51□□□□□ -0.41
PRE6YOL038W CTR1P49573 406 aa12.51□□□□□ -0.41
PRE6YOL038W YGR125WP53273 1036 aa12.51□□□□□ -0.41
PRE6YOL038W FOL1P53848 824 aa12.51□□□□□ -0.41
PRE6YOL038W YVH1Q02256 364 aaKnown RBP12.51□□□□□ -0.41
PRE6YOL038W DUS3Q06053 668 aaKnown RBP12.51□□□□□ -0.41
PRE6YOL038W YUR1P26725 428 aa12.5□□□□□ -0.41
PRE6YOL038W KSP1P38691 1029 aaKnown RBP12.5□□□□□ -0.41
PRE6YOL038W FIR1P40020 876 aa12.5□□□□□ -0.41
PRE6YOL038W CSM2P40465 213 aa12.5□□□□□ -0.41
PRE6YOL038W VPS30Q02948 557 aa12.5□□□□□ -0.41
PRE6YOL038W NUC1P08466 329 aa12.49□□□□□ -0.41
PRE6YOL038W SRP54P20424 541 aaKnown RBP12.49□□□□□ -0.41
PRE6YOL038W KTR2P33550 425 aa12.49□□□□□ -0.41
PRE6YOL038W VPS29P38759 282 aa12.49□□□□□ -0.41
PRE6YOL038W YPL034WQ03083 165 aa12.49□□□□□ -0.41
PRE6YOL038W SLD5Q03406 294 aa12.49□□□□□ -0.41
PRE6YOL038W CSC1Q06538 782 aa12.49□□□□□ -0.41
PRE6YOL038W PHR1P05066 565 aaKnown RBP RIP-Chip data12.48□□□□□ -0.41not detected
PRE6YOL038W MYO5Q04439 1219 aaKnown RBP12.48□□□□□ -0.41
PRE6YOL038W SPH1Q06160 661 aa12.48□□□□□ -0.41
PRE6YOL038W ERP3Q12403 225 aa12.48□□□□□ -0.41
PRE6YOL038W PGA3Q12746 312 aaKnown RBP12.48□□□□□ -0.41
PRE6YOL038W CDC19P00549 500 aaKnown RBP12.47□□□□□ -0.41
PRE6YOL038W SKI2P35207 1287 aaKnown RBP RIP-Chip data12.47□□□□□ -0.41not detected
PRE6YOL038W DBP7P36120 742 aaKnown RBP12.47□□□□□ -0.41
PRE6YOL038W YMR321CQ04898 105 aa12.47□□□□□ -0.41
PRE6YOL038W UTP4Q06679 776 aaKnown RBP12.47□□□□□ -0.41
PRE6YOL038W RER2P35196 286 aa12.46□□□□□ -0.41
PRE6YOL038W SSF2Q12153 453 aaPredicted RBP12.46□□□□□ -0.41
PRE6YOL038W RAD50P12753 1312 aa12.45□□□□□ -0.42
PRE6YOL038W DLD1P32891 587 aa12.45□□□□□ -0.42
PRE6YOL038W YKR018CP36114 725 aa12.45□□□□□ -0.42
PRE6YOL038W YAF9P53930 226 aa12.45□□□□□ -0.42
PRE6YOL038W RPT6Q01939 405 aaKnown RBP12.45□□□□□ -0.42
PRE6YOL038W VAS1P07806 1104 aaKnown RBP12.44□□□□□ -0.42
PRE6YOL038W MCR1P36060 302 aaKnown RBP12.44□□□□□ -0.42
PRE6YOL038W TOM71P38825 639 aaKnown RBP12.44□□□□□ -0.42
PRE6YOL038W CRG1P38892 291 aaRIP-Chip data12.44□□□□□ -0.42not detected
PRE6YOL038W SKP2P42843 763 aa12.44□□□□□ -0.42
PRE6YOL038W SPN1Q06505 410 aaPredicted RBP12.44□□□□□ -0.42
PRE6YOL038W HIP1P06775 603 aa12.43□□□□□ -0.42
PRE6YOL038W MAK31P23059 88 aa12.43□□□□□ -0.42
PRE6YOL038W RPL8BP29453 256 aaKnown RBP12.43□□□□□ -0.42
PRE6YOL038W VPS45P38932 577 aa12.43□□□□□ -0.42
PRE6YOL038W NOC2P39744 710 aaKnown RBP12.43□□□□□ -0.42
PRE6YOL038W TFC6Q06339 672 aa12.43□□□□□ -0.42
PRE6YOL038W MSC6Q08818 692 aaKnown RBP12.43□□□□□ -0.42
PRE6YOL038W PDC1P06169 563 aaKnown RBP12.42□□□□□ -0.42
PRE6YOL038W MIP1P15801 1254 aa12.42□□□□□ -0.42
PRE6YOL038W CIC1P38779 376 aaKnown RBP12.42□□□□□ -0.42
PRE6YOL038W IMP2'P32351 346 aa12.41□□□□□ -0.42
PRE6YOL038W BRN1P38170 754 aa12.41□□□□□ -0.42
PRE6YOL038W PES4P39684 611 aa12.41□□□□□ -0.42
PRE6YOL038W HXT17P53631 564 aa12.41□□□□□ -0.42
PRE6YOL038W RKM4Q12504 494 aa12.41□□□□□ -0.42
PRE6YOL038W POX1P13711 748 aa12.4□□□□□ -0.42
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms