RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W MON2P48563 1636 aaPredicted RBP22.58■■□□□ 1.21
PRE6YOL038W INO80P53115 1489 aa22.35■■□□□ 1.17
PRE6YOL038W SWR1Q05471 1514 aa21.55■■□□□ 1.04
PRE6YOL038W TY1B-DR4Q07793 1604 aa21.51■■□□□ 1.03
PRE6YOL038W DNA2P38859 1522 aa21.45■■□□□ 1.02
PRE6YOL038W TCB3Q03640 1545 aaKnown RBP21.41■■□□□ 1.02
PRE6YOL038W SGS1P35187 1447 aa21.2■□□□□ 0.98
PRE6YOL038W KOG1P38873 1557 aa21.1■□□□□ 0.97
PRE6YOL038W HSL1P34244 1518 aa20.75■□□□□ 0.91
PRE6YOL038W SPT6P23615 1451 aaKnown RBP20.65■□□□□ 0.9
PRE6YOL038W SPA2P23201 1466 aaKnown RBP20.36■□□□□ 0.85
PRE6YOL038W RSE1Q04693 1361 aaKnown RBP20.35■□□□□ 0.85
PRE6YOL038W HIR3P47171 1648 aa20.31■□□□□ 0.84
PRE6YOL038W ECM5Q03214 1411 aa20.09■□□□□ 0.81
PRE6YOL038W THO2P53552 1597 aaKnown RBP20.02■□□□□ 0.8
PRE6YOL038W BUD4P47136 1447 aa19.95■□□□□ 0.78
PRE6YOL038W XRN1P22147 1528 aaKnown RBP19.88■□□□□ 0.77
PRE6YOL038W MDS3P53094 1487 aa19.81■□□□□ 0.76
PRE6YOL038W PEP1P32319 1579 aa19.71■□□□□ 0.75
PRE6YOL038W SSN2P38931 1420 aa19.65■□□□□ 0.74
PRE6YOL038W ATG2P53855 1592 aa19.63■□□□□ 0.73
PRE6YOL038W REV3P14284 1504 aa19.57■□□□□ 0.72
PRE6YOL038W SIN3P22579 1536 aa19.35■□□□□ 0.69
PRE6YOL038W MTC1P47018 478 aaKnown RBP19.35■□□□□ 0.69
PRE6YOL038W TAF2P23255 1407 aa19.26■□□□□ 0.67
PRE6YOL038W BPT1P14772 1559 aa19.25■□□□□ 0.67
PRE6YOL038W SSK2P53599 1579 aa19.22■□□□□ 0.67
PRE6YOL038W SKI3P17883 1432 aaKnown RBP19.17■□□□□ 0.66
PRE6YOL038W ESP1Q03018 1630 aa19.14■□□□□ 0.65
PRE6YOL038W YCF1P39109 1515 aaKnown RBP18.93■□□□□ 0.62
PRE6YOL038W UFD4P33202 1483 aa18.85■□□□□ 0.61
PRE6YOL038W SCC2Q04002 1493 aa18.83■□□□□ 0.6
PRE6YOL038W YPK9Q12697 1472 aa18.79■□□□□ 0.6
PRE6YOL038W DRS1P32892 752 aaKnown RBP18.79■□□□□ 0.6
PRE6YOL038W MYO2P19524 1574 aaKnown RBP18.79■□□□□ 0.6
PRE6YOL038W TY2B-LR1P0C2J3 1770 aa18.76■□□□□ 0.59
PRE6YOL038W TY2B-FP0CX63 1770 aa18.76■□□□□ 0.59
PRE6YOL038W TY2B-GR2P0CX64 1770 aa18.76■□□□□ 0.59
PRE6YOL038W TY2B-CP25384 1770 aa18.76■□□□□ 0.59
PRE6YOL038W TY2B-DR2Q03494 1770 aa18.76■□□□□ 0.59
PRE6YOL038W TY1B-DR1Q03855 1755 aa18.76■□□□□ 0.59
PRE6YOL038W TY2B-DR3Q07791 1770 aaKnown RBP18.76■□□□□ 0.59
PRE6YOL038W TY2B-OR1Q12113 1770 aa18.76■□□□□ 0.59
PRE6YOL038W TY2B-DR1Q12472 1770 aa18.76■□□□□ 0.59
PRE6YOL038W TY2B-OR2Q12501 1770 aa18.76■□□□□ 0.59
PRE6YOL038W RPO31P04051 1460 aa18.67■□□□□ 0.58
PRE6YOL038W TY1B-BRQ12193 1756 aa18.65■□□□□ 0.58
PRE6YOL038W TY1B-GR3Q12316 1755 aa18.65■□□□□ 0.58
PRE6YOL038W TY1B-ORQ92393 1755 aa18.65■□□□□ 0.58
PRE6YOL038W CDC25P04821 1589 aa18.59■□□□□ 0.57
PRE6YOL038W ESC1Q03661 1658 aaKnown RBP18.57■□□□□ 0.56
PRE6YOL038W DNF1P32660 1571 aa18.54■□□□□ 0.56
PRE6YOL038W TY2B-BQ12491 1770 aa18.53■□□□□ 0.56
PRE6YOL038W CHD1P32657 1468 aa18.52■□□□□ 0.55
PRE6YOL038W TY1B-DR3Q99231 1755 aa18.49■□□□□ 0.55
PRE6YOL038W TY1B-HO13535 1793 aa18.47■□□□□ 0.55
PRE6YOL038W TY1B-DR5P0C2I2 1755 aa18.47■□□□□ 0.55
PRE6YOL038W TY1B-DR6P0C2I3 1755 aa18.47■□□□□ 0.55
PRE6YOL038W TY1B-LR2P0C2I5 1755 aa18.47■□□□□ 0.55
PRE6YOL038W TY1B-LR3P0C2I6 1755 aaKnown RBP18.47■□□□□ 0.55
PRE6YOL038W TY1B-PR1P0C2I9 1755 aaKnown RBP18.47■□□□□ 0.55
PRE6YOL038W TY1B-PR2P0C2J0 1756 aa18.47■□□□□ 0.55
PRE6YOL038W TY1B-PR3P0C2J1 1755 aaKnown RBP18.47■□□□□ 0.55
PRE6YOL038W TY1B-JR1P47098 1755 aa18.47■□□□□ 0.55
PRE6YOL038W TY1B-ML2Q03434 1755 aaKnown RBP18.47■□□□□ 0.55
PRE6YOL038W TY1B-ER1Q03612 1755 aa18.47■□□□□ 0.55
PRE6YOL038W TY1B-ML1Q04711 1755 aaKnown RBP18.47■□□□□ 0.55
PRE6YOL038W TY1B-GR2Q12269 1755 aa18.47■□□□□ 0.55
PRE6YOL038W TY1B-OLQ12273 1755 aa18.47■□□□□ 0.55
PRE6YOL038W TY1B-PLQ12414 1755 aaKnown RBP18.47■□□□□ 0.55
PRE6YOL038W RPA190P10964 1664 aaKnown RBP18.39■□□□□ 0.53
PRE6YOL038W PAN1P32521 1480 aa18.34■□□□□ 0.53
PRE6YOL038W RKR1Q04781 1562 aa18.34■□□□□ 0.53
PRE6YOL038W TOP2P06786 1428 aaKnown RBP18.33■□□□□ 0.53
PRE6YOL038W MET5P47169 1442 aa18.29■□□□□ 0.52
PRE6YOL038W RQC2Q12532 1038 aaKnown RBP18.24■□□□□ 0.51
PRE6YOL038W POL1P13382 1468 aa18.24■□□□□ 0.51
PRE6YOL038W MMS22Q06164 1454 aa18.17■□□□□ 0.5
PRE6YOL038W STU1P38198 1513 aa18.11■□□□□ 0.49
PRE6YOL038W BNI1P41832 1953 aa18.1■□□□□ 0.49
PRE6YOL038W TY1B-JR2P47100 1755 aaKnown RBP18.1■□□□□ 0.49
PRE6YOL038W TY1B-ER2Q03619 1755 aa18.1■□□□□ 0.49
PRE6YOL038W TY1B-MR1Q04214 1755 aa18.1■□□□□ 0.49
PRE6YOL038W TY1B-MR2Q04670 1755 aaKnown RBP18.1■□□□□ 0.49
PRE6YOL038W TY1B-LR1Q12088 1755 aaKnown RBP18.1■□□□□ 0.49
PRE6YOL038W TY1B-NL1Q12112 1755 aa18.1■□□□□ 0.49
PRE6YOL038W TY1B-GR1Q12141 1755 aa18.1■□□□□ 0.49
PRE6YOL038W TY1B-BLQ12490 1755 aa18.1■□□□□ 0.49
PRE6YOL038W YOR1P53049 1477 aa18.1■□□□□ 0.49
PRE6YOL038W YRF1-1P0CX20 1796 aa18.07■□□□□ 0.48
PRE6YOL038W YRF1-5P0CX21 1796 aa18.07■□□□□ 0.48
PRE6YOL038W YRF1-8P0CX22 1796 aa18.07■□□□□ 0.48
PRE6YOL038W LTE1P07866 1435 aa18.05■□□□□ 0.48
PRE6YOL038W SMC4Q12267 1418 aa18.04■□□□□ 0.48
PRE6YOL038W TRM732Q03496 1420 aa17.98■□□□□ 0.47
PRE6YOL038W NTE1Q04958 1679 aa17.96■□□□□ 0.47
PRE6YOL038W SPP41P38904 1435 aa17.96■□□□□ 0.47
PRE6YOL038W RPO21P04050 1733 aaKnown RBP17.89■□□□□ 0.46
PRE6YOL038W NUP159P40477 1460 aa17.88■□□□□ 0.45
PRE6YOL038W VTH1P40438 1549 aa17.88■□□□□ 0.45
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms