Protein–RNA interactions for Protein: Q07963

UBR2, E3 ubiquitin-protein ligase UBR2, yeastyeast

Predictions only

Length 1,872 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBR2Q07963 YML009W-BYML009W-B 477 nt22.26■■□□□ 1.15
UBR2Q07963 NOP1YDL014W 984 nt21.32■■□□□ 1
UBR2Q07963 NSR1YGR159C 1245 nt21.16■□□□□ 0.98
UBR2Q07963 YKL036CYKL036C 393 nt20.67■□□□□ 0.9
UBR2Q07963 SCS3YGL126W 1143 nt19.31■□□□□ 0.68
UBR2Q07963 YJL027CYJL027C 417 nt19.29■□□□□ 0.68
UBR2Q07963 Q0297Q0297 156 nt19.23■□□□□ 0.67
UBR2Q07963 SRX1YKL086W 384 nt19.23■□□□□ 0.67
UBR2Q07963 MDJ1YFL016C 1536 nt18.55■□□□□ 0.56
UBR2Q07963 YCR051WYCR051W 669 nt18.11■□□□□ 0.49
UBR2Q07963 YOL085CYOL085C 342 nt17.66■□□□□ 0.42
UBR2Q07963 SCJ1YMR214W 1134 nt17.65■□□□□ 0.42
UBR2Q07963 PKP1YIL042C 1185 nt17.58■□□□□ 0.41
UBR2Q07963 ATS1YAL020C 1002 nt17.17■□□□□ 0.34
UBR2Q07963 RPP1BYDL130W 321 nt17.12■□□□□ 0.33
UBR2Q07963 TRN1tP(UGG)A 72 nt16.99■□□□□ 0.31
UBR2Q07963 SUF9tP(UGG)F 72 nt16.99■□□□□ 0.31
UBR2Q07963 SUF8tP(UGG)H 72 nt16.99■□□□□ 0.31
UBR2Q07963 tP(UGG)LtP(UGG)L 72 nt16.99■□□□□ 0.31
UBR2Q07963 SUF7tP(UGG)M 72 nt16.99■□□□□ 0.31
UBR2Q07963 tP(UGG)N1tP(UGG)N1 72 nt16.99■□□□□ 0.31
UBR2Q07963 tP(UGG)N2tP(UGG)N2 72 nt16.99■□□□□ 0.31
UBR2Q07963 tP(UGG)O1tP(UGG)O1 72 nt16.99■□□□□ 0.31
UBR2Q07963 SUF11tP(UGG)O2 72 nt16.99■□□□□ 0.31
UBR2Q07963 DBP2YNL112W 1641 nt16.71■□□□□ 0.26
UBR2Q07963 CCC1YLR220W 969 nt16.59■□□□□ 0.25
UBR2Q07963 PET122YER153C 765 nt16.48■□□□□ 0.23
UBR2Q07963 SCR1SCR1 522 nt16.35■□□□□ 0.21
UBR2Q07963 RTC3YHR087W 336 nt16.14■□□□□ 0.17
UBR2Q07963 tP(UGG)O3tP(UGG)O3 72 nt16.12■□□□□ 0.17
UBR2Q07963 RRN5YLR141W 1092 nt15.96■□□□□ 0.15
UBR2Q07963 RSB1YOR049C 1065 nt15.96■□□□□ 0.15
UBR2Q07963 PST2YDR032C 597 nt15.82■□□□□ 0.12
UBR2Q07963 YER088W-BYER088W-B 147 nt15.65■□□□□ 0.1
UBR2Q07963 YKL097CYKL097C 411 nt15.65■□□□□ 0.1
UBR2Q07963 RVS167YDR388W 1449 nt15.63■□□□□ 0.09
UBR2Q07963 YBR190WYBR190W 312 nt15.5■□□□□ 0.07
UBR2Q07963 YDJ1YNL064C 1230 nt15.45■□□□□ 0.06
UBR2Q07963 SHR5YOL110W 714 nt15.29■□□□□ 0.04
UBR2Q07963 SHU1YHL006C 453 nt15.18■□□□□ 0.02
UBR2Q07963 GAR1YHR089C 618 nt15.1■□□□□ 0.01
UBR2Q07963 YOR139CYOR139C 393 nt15.08■□□□□ 0.01
UBR2Q07963 YAL037C-BYAL037C-B 975 nt14.93□□□□□ -0.02
UBR2Q07963 DEP1YAL013W 1218 nt14.81□□□□□ -0.04
UBR2Q07963 NPL3YDR432W 1245 nt14.62□□□□□ -0.07
UBR2Q07963 URN1YPR152C 1398 nt14.61□□□□□ -0.07
UBR2Q07963 TIR1YER011W 765 nt14.52□□□□□ -0.09
UBR2Q07963 MNP1YGL068W 585 nt14.43□□□□□ -0.1
UBR2Q07963 SRB2YHR041C 633 nt14.42□□□□□ -0.1
UBR2Q07963 PUT4YOR348C 1884 nt14.33□□□□□ -0.11
UBR2Q07963 YNL208WYNL208W 600 nt14.32□□□□□ -0.12
UBR2Q07963 SSA1YAL005C 1929 nt14.31□□□□□ -0.12
UBR2Q07963 YOL037CYOL037C 354 nt14.26□□□□□ -0.13
UBR2Q07963 WWM1YFL010C 636 nt14.24□□□□□ -0.13
UBR2Q07963 RPN10YHR200W 807 nt14.23□□□□□ -0.13
UBR2Q07963 HOM6YJR139C 1080 nt14.23□□□□□ -0.13
UBR2Q07963 ARE1YCR048W 1833 nt14.19□□□□□ -0.14
UBR2Q07963 SAH1YER043C 1350 nt14.16□□□□□ -0.14
UBR2Q07963 YGR021WYGR021W 873 nt14.13□□□□□ -0.15
UBR2Q07963 OPI9YLR338W 858 nt14.12□□□□□ -0.15
UBR2Q07963 tM(CAU)CtM(CAU)C 72 nt14.12□□□□□ -0.15
UBR2Q07963 IMT4tM(CAU)E 72 nt14.12□□□□□ -0.15
UBR2Q07963 IMT3tM(CAU)J3 72 nt14.12□□□□□ -0.15
UBR2Q07963 IMT1tM(CAU)O1 72 nt14.12□□□□□ -0.15
UBR2Q07963 IMT2tM(CAU)P 72 nt14.12□□□□□ -0.15
UBR2Q07963 YHR049C-AYHR049C-A 297 nt14.08□□□□□ -0.16
UBR2Q07963 YJR120WYJR120W 351 nt14.08□□□□□ -0.16
UBR2Q07963 MOT3YMR070W 1473 nt13.93□□□□□ -0.18
UBR2Q07963 POA1YBR022W 534 nt13.92□□□□□ -0.18
UBR2Q07963 PUS2YGL063W 1113 nt13.91□□□□□ -0.18
UBR2Q07963 YJR018WYJR018W 363 nt13.9□□□□□ -0.18
UBR2Q07963 YFL021C-AYFL021C-A 855 nt13.86□□□□□ -0.19
UBR2Q07963 RKM5YLR137W 1104 nt13.86□□□□□ -0.19
UBR2Q07963 SSA3YBL075C 1950 nt13.85□□□□□ -0.19
UBR2Q07963 BSC6YOL137W 1494 nt13.84□□□□□ -0.19
UBR2Q07963 YLR281CYLR281C 468 nt13.8□□□□□ -0.2
UBR2Q07963 WHI5YOR083W 888 nt13.73□□□□□ -0.21
UBR2Q07963 BUD23YCR047C 828 nt13.67□□□□□ -0.22
UBR2Q07963 PUN1YLR414C 792 nt13.66□□□□□ -0.22
UBR2Q07963 BDH2YAL061W 1254 nt13.65□□□□□ -0.22
UBR2Q07963 YPR011CYPR011C 981 nt13.63□□□□□ -0.23
UBR2Q07963 RPP2BYDR382W 333 nt13.61□□□□□ -0.23
UBR2Q07963 YLR236CYLR236C 324 nt13.61□□□□□ -0.23
UBR2Q07963 FMP45YDL222C 930 nt13.6□□□□□ -0.23
UBR2Q07963 MRPL8YJL063C 717 nt13.57□□□□□ -0.24
UBR2Q07963 RTG1YOL067C 534 nt13.51□□□□□ -0.25
UBR2Q07963 DSK2YMR276W 1122 nt13.47□□□□□ -0.25
UBR2Q07963 IMP2'YIL154C 1041 nt13.46□□□□□ -0.25
UBR2Q07963 PTC2YER089C 1395 nt13.46□□□□□ -0.25
UBR2Q07963 ADO1YJR105W 1023 nt13.42□□□□□ -0.26
UBR2Q07963 UBX6YJL048C 1191 nt13.4□□□□□ -0.26
UBR2Q07963 YLR154C-GYLR154C-G 150 nt13.36□□□□□ -0.27
UBR2Q07963 NAB2YGL122C 1578 nt13.35□□□□□ -0.27
UBR2Q07963 YEL076C-AYEL076C-A 651 nt13.33□□□□□ -0.27
UBR2Q07963 YEL076CYEL076C 651 nt13.33□□□□□ -0.27
UBR2Q07963 YCH1YGR203W 447 nt13.33□□□□□ -0.27
UBR2Q07963 YLR464WYLR464W 651 nt13.33□□□□□ -0.27
UBR2Q07963 LPX1YOR084W 1164 nt13.33□□□□□ -0.27
UBR2Q07963 FIS1YIL065C 468 nt13.31□□□□□ -0.28
UBR2Q07963 LSM3YLR438C-A 270 nt13.3□□□□□ -0.28
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms