RNA–Protein interactions for RNA: YNL073W

MSK1, Transcript of Mitochondrial lysine-tRNA synthetase, yeast

Gene MSK1, Length 1,731 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSK1	YNL073W	KIN1	P13185	1064 aa		4.89	□□□□□ -1.63
MSK1	YNL073W	RAD53	P22216	821 aa		4.89	□□□□□ -1.63
MSK1	YNL073W	RIM20	Q12033	661 aa		4.89	□□□□□ -1.63
MSK1	YNL073W	LAM4	P38800	1345 aa		4.88	□□□□□ -1.63
MSK1	YNL073W	TPM1	P17536	199 aa	Known RBP	4.88	□□□□□ -1.63
MSK1	YNL073W	MET1	P36150	593 aa		4.88	□□□□□ -1.63
MSK1	YNL073W	AAP1	P37898	856 aa	Known RBP	4.88	□□□□□ -1.63
MSK1	YNL073W	RTS1	P38903	757 aa		4.88	□□□□□ -1.63
MSK1	YNL073W	STM1	P39015	273 aa	Known RBP	4.88	□□□□□ -1.63
MSK1	YNL073W	NSG2	P53898	299 aa		4.88	□□□□□ -1.63
MSK1	YNL073W	GCR2	Q01722	534 aa		4.88	□□□□□ -1.63
MSK1	YNL073W	SSF2	Q12153	453 aa	Predicted RBP	4.88	□□□□□ -1.63
MSK1	YNL073W	ADP1	P25371	1049 aa		4.87	□□□□□ -1.63
MSK1	YNL073W	PES4	P39684	611 aa		4.87	□□□□□ -1.63
MSK1	YNL073W	YMR147W	P40218	223 aa	Known RBP	4.87	□□□□□ -1.63
MSK1	YNL073W	SNU71	P53207	620 aa	Known RBP	4.87	□□□□□ -1.63
MSK1	YNL073W	RMD1	Q03441	430 aa		4.87	□□□□□ -1.63
MSK1	YNL073W	YPL260W	Q08977	551 aa		4.87	□□□□□ -1.63
MSK1	YNL073W	HO	P09932	586 aa		4.86	□□□□□ -1.63
MSK1	YNL073W	COQ1	P18900	473 aa		4.86	□□□□□ -1.63
MSK1	YNL073W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
MSK1	YNL073W	BSD2	P38356	321 aa		4.86	□□□□□ -1.63
MSK1	YNL073W	TPS3	P38426	1054 aa	Known RBP	4.86	□□□□□ -1.63
MSK1	YNL073W	KEL1	P38853	1164 aa	Known RBP	4.86	□□□□□ -1.63
MSK1	YNL073W	FPR4	Q06205	392 aa	Predicted RBP	4.86	□□□□□ -1.63
MSK1	YNL073W	PPM2	Q08282	695 aa		4.86	□□□□□ -1.63
MSK1	YNL073W	KEL3	Q08979	651 aa	Predicted RBP	4.86	□□□□□ -1.63
MSK1	YNL073W	PMA1	P05030	918 aa	Known RBP	4.86	□□□□□ -1.63
MSK1	YNL073W	MPH3	P0CE00	602 aa		4.86	□□□□□ -1.63
MSK1	YNL073W	HVG1	P0CE11	249 aa		4.86	□□□□□ -1.63
MSK1	YNL073W	PRE8	P23639	250 aa		4.86	□□□□□ -1.63
MSK1	YNL073W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
MSK1	YNL073W	BRN1	P38170	754 aa		4.86	□□□□□ -1.63
MSK1	YNL073W	ETP1	P38748	585 aa	Known RBP	4.86	□□□□□ -1.63
MSK1	YNL073W	CRG1	P38892	291 aa	RIP-Chip data	4.86	□□□□□ -1.63	not detected
MSK1	YNL073W	TFC8	Q12308	588 aa		4.86	□□□□□ -1.63
MSK1	YNL073W	DUR1,2	P32528	1835 aa	Known RBP	4.85	□□□□□ -1.63
MSK1	YNL073W	SLN1	P39928	1220 aa	Predicted RBP	4.85	□□□□□ -1.63
MSK1	YNL073W	RPS15	Q01855	142 aa	Known RBP	4.85	□□□□□ -1.63
MSK1	YNL073W	SKG3	Q06315	1026 aa		4.85	□□□□□ -1.63
MSK1	YNL073W	SPN1	Q06505	410 aa	Predicted RBP	4.85	□□□□□ -1.63
MSK1	YNL073W	RAD61	Q99359	647 aa		4.85	□□□□□ -1.63
MSK1	YNL073W	FLO1	P32768	1537 aa		4.84	□□□□□ -1.63
MSK1	YNL073W	TOM1	Q03280	3268 aa		4.84	□□□□□ -1.63
MSK1	YNL073W	SRM1	P21827	482 aa		4.84	□□□□□ -1.63
MSK1	YNL073W	YBL028C	P38202	106 aa		4.84	□□□□□ -1.63
MSK1	YNL073W	CST26	P38226	397 aa		4.84	□□□□□ -1.63
MSK1	YNL073W	SPO22	P40511	975 aa		4.84	□□□□□ -1.63
MSK1	YNL073W	CST9	Q06032	482 aa		4.84	□□□□□ -1.63
MSK1	YNL073W	SUB2	Q07478	446 aa	Known RBP	4.84	□□□□□ -1.63
MSK1	YNL073W	DLD1	P32891	587 aa		4.83	□□□□□ -1.64
MSK1	YNL073W	MYO3	P36006	1272 aa		4.83	□□□□□ -1.64
MSK1	YNL073W	RRP8	P38961	392 aa	Known RBP	4.83	□□□□□ -1.64
MSK1	YNL073W	PNT1	P38969	423 aa		4.83	□□□□□ -1.64
MSK1	YNL073W	MRD1	Q06106	887 aa	Known RBP	4.83	□□□□□ -1.64
MSK1	YNL073W	YDL124W	Q07551	312 aa	Known RBP	4.83	□□□□□ -1.64
MSK1	YNL073W	GIN4	Q12263	1142 aa		4.83	□□□□□ -1.64
MSK1	YNL073W	TUS1	Q06412	1307 aa		4.83	□□□□□ -1.64
MSK1	YNL073W	CHO2	P05374	869 aa	Known RBP	4.83	□□□□□ -1.64
MSK1	YNL073W	ERG12	P07277	443 aa		4.83	□□□□□ -1.64
MSK1	YNL073W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
MSK1	YNL073W	RPC31	P17890	251 aa		4.83	□□□□□ -1.64
MSK1	YNL073W	YHL050C	P38721	697 aa		4.83	□□□□□ -1.64
MSK1	YNL073W	RSC30	P38781	883 aa		4.83	□□□□□ -1.64
MSK1	YNL073W	DMA1	P38823	416 aa		4.83	□□□□□ -1.64
MSK1	YNL073W	VID27	P40157	782 aa		4.83	□□□□□ -1.64
MSK1	YNL073W	NET1	P47035	1189 aa		4.83	□□□□□ -1.64
MSK1	YNL073W	CLF1	Q12309	687 aa	Predicted RBP	4.83	□□□□□ -1.64
MSK1	YNL073W	SRF1	Q12516	437 aa		4.83	□□□□□ -1.64
MSK1	YNL073W	TIF6	Q12522	245 aa	Known RBP	4.83	□□□□□ -1.64
MSK1	YNL073W	PER1	P25625	357 aa		4.82	□□□□□ -1.64
MSK1	YNL073W	SPB4	P25808	606 aa	Predicted RBP	4.82	□□□□□ -1.64
MSK1	YNL073W	ANP1	P32629	500 aa		4.82	□□□□□ -1.64
MSK1	YNL073W	MOT2	P34909	587 aa	Known RBP	4.82	□□□□□ -1.64
MSK1	YNL073W	RER2	P35196	286 aa		4.82	□□□□□ -1.64
MSK1	YNL073W	OCT1	P35999	772 aa		4.82	□□□□□ -1.64
MSK1	YNL073W	HXT13	P39924	564 aa		4.82	□□□□□ -1.64
MSK1	YNL073W	TIF4631	P39935	952 aa	Known RBP	4.82	□□□□□ -1.64
MSK1	YNL073W	YIR014W	P40570	242 aa		4.82	□□□□□ -1.64
MSK1	YNL073W	HXT17	P53631	564 aa		4.82	□□□□□ -1.64
MSK1	YNL073W	UFD2	P54860	961 aa		4.82	□□□□□ -1.64
MSK1	YNL073W	RBA50	Q04418	439 aa		4.82	□□□□□ -1.64
MSK1	YNL073W	TUB2	P02557	457 aa	Known RBP	4.81	□□□□□ -1.64
MSK1	YNL073W	PEP3	P27801	918 aa		4.81	□□□□□ -1.64
MSK1	YNL073W	APE3	P37302	537 aa	Known RBP	4.81	□□□□□ -1.64
MSK1	YNL073W	ACA1	P39970	489 aa		4.81	□□□□□ -1.64
MSK1	YNL073W	ALG2	P43636	503 aa		4.81	□□□□□ -1.64
MSK1	YNL073W	SOL4	P53315	255 aa		4.81	□□□□□ -1.64
MSK1	YNL073W	DUS1	P53759	423 aa	Known RBP	4.81	□□□□□ -1.64
MSK1	YNL073W	ECM23	Q02710	187 aa		4.81	□□□□□ -1.64
MSK1	YNL073W	TRL1	P09880	827 aa	Known RBP	4.8	□□□□□ -1.64
MSK1	YNL073W	DIT2	P21595	489 aa		4.8	□□□□□ -1.64
MSK1	YNL073W	VPS8	P39702	1274 aa		4.8	□□□□□ -1.64
MSK1	YNL073W	VAB2	P40003	282 aa		4.8	□□□□□ -1.64
MSK1	YNL073W	AIM9	P40053	627 aa	Known RBP	4.8	□□□□□ -1.64
MSK1	YNL073W	LYS14	P40971	790 aa		4.8	□□□□□ -1.64
MSK1	YNL073W	MYO5	Q04439	1219 aa	Known RBP	4.8	□□□□□ -1.64
MSK1	YNL073W	MAK31	P23059	88 aa		4.8	□□□□□ -1.64
MSK1	YNL073W	CHS3	P29465	1165 aa		4.8	□□□□□ -1.64
MSK1	YNL073W	OPY1	P38271	328 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 70.7 ms