RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Atf3Q60765 181 aa16.32■□□□□ 0.2
Ccdc28b-201ENSMUST00000030586 Col14a1Q80X19 1797 aa16.32■□□□□ 0.2
Ccdc28b-201ENSMUST00000030586 Pik3c2bE9QAN8 1632 aa16.31■□□□□ 0.2
Ccdc28b-201ENSMUST00000030586 Ppargc1bQ8VHJ7 1014 aa16.29■□□□□ 0.2
Ccdc28b-201ENSMUST00000030586 Stag3O70576 1240 aa16.28■□□□□ 0.2
Ccdc28b-201ENSMUST00000030586 Atp2b2Q9R0K7 1198 aa16.28■□□□□ 0.2
Ccdc28b-201ENSMUST00000030586 Nphp4P59240 1425 aa16.28■□□□□ 0.2
Ccdc28b-201ENSMUST00000030586 Dapk1Q80YE7 1442 aa16.28■□□□□ 0.2
Ccdc28b-201ENSMUST00000030586 Mink1Q9JM52 1308 aa16.27■□□□□ 0.2
Ccdc28b-201ENSMUST00000030586 IqubQ8CDK3 788 aa16.27■□□□□ 0.2
Ccdc28b-201ENSMUST00000030586 Idi1P58044 227 aa16.26■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 Ddx17Q501J6 650 aaKnown RBP16.26■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 Sipa1l1Q8C0T5 1782 aa16.25■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 Sipa1l2Q80TE4 1722 aa16.25■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 KdrP35918 1367 aa16.25■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 Gtf2e1Q9D0D5 440 aa16.24■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 Rreb1Q3UH06 1700 aaKnown RBP16.24■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 Abca14E9Q8F8 1683 aa16.24■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 Rundc1Q0VDN7 615 aa16.23■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 D430041D05RikF6ZGR6 1678 aa16.23■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 Qtrt2B8ZXI1 415 aa16.22■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 GnpatP98192 678 aa16.22■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 Zbtb4Q5F293 982 aa16.22■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 Cypt2Q6P924 180 aa16.22■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 NktrP30415 1453 aa16.22■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 Kif20bQ80WE4 1774 aaKnown RBP16.21■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 Kcna6Q61923 529 aa16.21■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 Zranb1Q7M760 708 aa16.21■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 Znf526Q8BI66 675 aa16.21■□□□□ 0.19
Ccdc28b-201ENSMUST00000030586 C5P06684 1680 aa16.21■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Als2Q920R0 1651 aa16.21■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Nyap1Q6PFX7 833 aa16.2■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Srcin1Q9QWI6 1250 aa16.2■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Tmem2Q5FWI3 1383 aa16.19■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Cdk19Q8BWD8 501 aa16.19■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Farp2Q91VS8 1065 aa16.19■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Kif24Q6NWW5 1356 aa16.18■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Sox12Q04890 314 aa16.18■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Gm16486A0A1D5RMD1 1434 aa16.18■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Pik3c2aQ61194 1686 aa16.18■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Stard8Q8K031 1019 aa16.17■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Bcl2l12Q9D3J3 255 aa16.17■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 DccP70211 1447 aa16.17■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Card11Q8CIS0 1159 aa16.16■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Slc5a4bQ91ZP4 660 aa16.16■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Sirt1Q923E4 737 aa16.16■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 TonslQ6NZL6 1363 aa16.15■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Camta1A2A891 1682 aa16.15■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Ybx3Q9JKB3 361 aaKnown RBP16.15■□□□□ 0.18
Ccdc28b-201ENSMUST00000030586 Znf316Q6PGE4 1016 aa16.14■□□□□ 0.17
Ccdc28b-201ENSMUST00000030586 Sema6bO54951 886 aa16.13■□□□□ 0.17
Ccdc28b-201ENSMUST00000030586 CenpjQ569L8 1344 aa16.13■□□□□ 0.17
Ccdc28b-201ENSMUST00000030586 NgefQ8CHT1 710 aa16.12■□□□□ 0.17
Ccdc28b-201ENSMUST00000030586 Abcc10Q8R4P9 1501 aa16.12■□□□□ 0.17
Ccdc28b-201ENSMUST00000030586 NefmP08553 848 aa16.11■□□□□ 0.17
Ccdc28b-201ENSMUST00000030586 Slc35g1Q8BY79 368 aa16.11■□□□□ 0.17
Ccdc28b-201ENSMUST00000030586 Rock2P70336 1388 aa16.11■□□□□ 0.17
Ccdc28b-201ENSMUST00000030586 Wnk3Q80XP9 1757 aa16.1■□□□□ 0.17
Ccdc28b-201ENSMUST00000030586 Pola1P33609 1465 aa16.1■□□□□ 0.17
Ccdc28b-201ENSMUST00000030586 Smim5Q8BT42 78 aa16.1■□□□□ 0.17
Ccdc28b-201ENSMUST00000030586 Cntnap1O54991 1385 aa16.1■□□□□ 0.17
Ccdc28b-201ENSMUST00000030586 PtpruB1AUH1 1446 aa16.1■□□□□ 0.17
Ccdc28b-201ENSMUST00000030586 Gsto1O09131 240 aa16.08■□□□□ 0.16
Ccdc28b-201ENSMUST00000030586 Wdr17E9Q271 1322 aa16.08■□□□□ 0.16
Ccdc28b-201ENSMUST00000030586 Ap3b2Q9JME5 1082 aa16.07■□□□□ 0.16
Ccdc28b-201ENSMUST00000030586 Acin1Q9JIX8 1338 aaKnown RBP16.07■□□□□ 0.16
Ccdc28b-201ENSMUST00000030586 Rpgrip1Q9EPQ2 1331 aa16.06■□□□□ 0.16
Ccdc28b-201ENSMUST00000030586 Fnbp4Q6ZQ03 1031 aa16.06■□□□□ 0.16
Ccdc28b-201ENSMUST00000030586 Map3k19E9Q3S4 1311 aa16.05■□□□□ 0.16
Ccdc28b-201ENSMUST00000030586 MypopQ8R4U1 393 aa16.05■□□□□ 0.16
Ccdc28b-201ENSMUST00000030586 Nhsl1Q8CAF4 1587 aa16.04■□□□□ 0.16
Ccdc28b-201ENSMUST00000030586 Idi2Q8BFZ6 227 aa16.04■□□□□ 0.16
Ccdc28b-201ENSMUST00000030586 InsrP15208 1372 aa16.03■□□□□ 0.16
Ccdc28b-201ENSMUST00000030586 Lrp6O88572 1613 aa16.03■□□□□ 0.16
Ccdc28b-201ENSMUST00000030586 Kif1aP33173 1695 aa16.02■□□□□ 0.16
Ccdc28b-201ENSMUST00000030586 Zfp142G5E869 1843 aa16.02■□□□□ 0.16
Ccdc28b-201ENSMUST00000030586 Slit2Q9R1B9 1521 aa16.02■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 N4bp2F8VQG7 1678 aaKnown RBP16.02■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Mon2Q80TL7 1715 aa16■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Cnga1P29974 684 aa16■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Sin3aQ60520 1274 aaKnown RBP16■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Acsbg1Q99PU5 721 aa16■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Exosc9Q9JHI7 438 aaKnown RBP16■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Atp7bQ64446 1462 aa15.99■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 CatipB9EKE5 520 aa15.99■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 FanciQ8K368 1330 aa15.98■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Atp10bB1AWN4 1474 aa15.98■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Adgrl1Q80TR1 1466 aa15.98■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Siglec1Q62230 1695 aa15.98■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Nrxn1Q9CS84 1514 aa15.98■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Fam135bQ9DAI6 1403 aa15.97■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Fyb1O35601 819 aa15.97■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Fbln2P37889 1221 aa15.97■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Ggt6Q6PDE7 497 aa15.97■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Dixdc1Q80Y83 711 aa15.97■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Cadps2Q8BYR5 1297 aa15.96■□□□□ 0.15
Ccdc28b-201ENSMUST00000030586 Col16a1Q8BLX7 1580 aa15.96■□□□□ 0.14
Ccdc28b-201ENSMUST00000030586 Arhgef1Q61210 920 aaKnown RBP15.95■□□□□ 0.14
Ccdc28b-201ENSMUST00000030586 Sbno1Q689Z5 1390 aa15.95■□□□□ 0.14
Ccdc28b-201ENSMUST00000030586 Tnrc6bQ8BKI2 1810 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms