Protein–RNA interactions for Protein: P33173

Kif1a, Kinesin-like protein KIF1A, mousemouse

Predictions only

Length 1,695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kif1aP33173 Gm25239-201ENSMUST00000174915 86 ntBASIC54,22■■■■■ 6,27
Kif1aP33173 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC50,48■■■■■ 5,67
Kif1aP33173 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC49,42■■■■■ 5,5
Kif1aP33173 Gm24109-201ENSMUST00000175489 103 ntBASIC47,35■■■■■ 5,17
Kif1aP33173 Gm15042-201ENSMUST00000120212 883 ntBASIC47■■■■■ 5,12
Kif1aP33173 Gm15045-201ENSMUST00000117359 883 ntBASIC46,03■■■■■ 4,96
Kif1aP33173 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC45,85■■■■■ 4,93
Kif1aP33173 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC45,67■■■■■ 4,9
Kif1aP33173 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC45,58■■■■■ 4,89
Kif1aP33173 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC45,28■■■■■ 4,84
Kif1aP33173 Gm23366-201ENSMUST00000175022 89 ntBASIC45,19■■■■■ 4,83
Kif1aP33173 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC44,79■■■■■ 4,76
Kif1aP33173 AC153911.1-202ENSMUST00000218534 1034 ntBASIC44,19■■■■■ 4,66
Kif1aP33173 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC43,84■■■■■ 4,61
Kif1aP33173 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC43,78■■■■■ 4,6
Kif1aP33173 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC43,74■■■■■ 4,59
Kif1aP33173 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC43,69■■■■■ 4,58
Kif1aP33173 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC43,68■■■■■ 4,58
Kif1aP33173 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC43,32■■■■■ 4,53
Kif1aP33173 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC43,21■■■■■ 4,51
Kif1aP33173 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC43,21■■■■■ 4,51
Kif1aP33173 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC43,14■■■■■ 4,5
Kif1aP33173 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC43,05■■■■■ 4,48
Kif1aP33173 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC42,97■■■■■ 4,47
Kif1aP33173 Gm25238-201ENSMUST00000174914 89 ntBASIC42,89■■■■■ 4,46
Kif1aP33173 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC42,55■■■■■ 4,4
Kif1aP33173 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC42,41■■■■■ 4,38
Kif1aP33173 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC42,22■■■■■ 4,35
Kif1aP33173 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC42,2■■■■■ 4,35
Kif1aP33173 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC42,19■■■■■ 4,34
Kif1aP33173 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC42,01■■■■■ 4,32
Kif1aP33173 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC42■■■■■ 4,31
Kif1aP33173 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC41,84■■■■■ 4,29
Kif1aP33173 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC41,72■■■■■ 4,27
Kif1aP33173 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC41,71■■■■■ 4,27
Kif1aP33173 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC41,59■■■■■ 4,25
Kif1aP33173 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC41,58■■■■■ 4,25
Kif1aP33173 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC41,55■■■■■ 4,24
Kif1aP33173 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC41,46■■■■■ 4,23
Kif1aP33173 Gm25262-201ENSMUST00000174934 133 ntBASIC41,24■■■■■ 4,19
Kif1aP33173 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC41,2■■■■■ 4,19
Kif1aP33173 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC41,18■■■■■ 4,18
Kif1aP33173 Psd-208ENSMUST00000224556 2034 ntBASIC41,14■■■■■ 4,18
Kif1aP33173 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC41,04■■■■■ 4,16
Kif1aP33173 Gm27325-201ENSMUST00000175467 74 ntBASIC41,04■■■■■ 4,16
Kif1aP33173 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC41,04■■■■■ 4,16
Kif1aP33173 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC40,85■■■■■ 4,13
Kif1aP33173 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC40,84■■■■■ 4,13
Kif1aP33173 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC40,72■■■■■ 4,11
Kif1aP33173 Rab21-202ENSMUST00000218831 843 ntBASIC40,62■■■■■ 4,09
Kif1aP33173 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC40,59■■■■■ 4,09
Kif1aP33173 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC40,58■■■■■ 4,09
Kif1aP33173 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC40,55■■■■■ 4,08
Kif1aP33173 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC40,5■■■■■ 4,07
Kif1aP33173 Gm26115-201ENSMUST00000175605 87 ntBASIC40,45■■■■■ 4,07
Kif1aP33173 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC40,29■■■■■ 4,04
Kif1aP33173 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC40,29■■■■■ 4,04
Kif1aP33173 Gm8109-201ENSMUST00000194076 746 ntBASIC40,29■■■■■ 4,04
Kif1aP33173 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC40,29■■■■■ 4,04
Kif1aP33173 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC40,17■■■■■ 4,02
Kif1aP33173 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC40,17■■■■■ 4,02
Kif1aP33173 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC40,15■■■■■ 4,02
Kif1aP33173 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC40,13■■■■■ 4,01
Kif1aP33173 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC40,05■■■■■ 4
Kif1aP33173 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC40,01■■■■■ 4
Kif1aP33173 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC39,99■■■■□ 3,99
Kif1aP33173 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC39,89■■■■□ 3,98
Kif1aP33173 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC39,84■■■■□ 3,97
Kif1aP33173 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC39,81■■■■□ 3,96
Kif1aP33173 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC39,8■■■■□ 3,96
Kif1aP33173 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC39,78■■■■□ 3,96
Kif1aP33173 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC39,72■■■■□ 3,95
Kif1aP33173 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC39,71■■■■□ 3,95
Kif1aP33173 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC39,64■■■■□ 3,94
Kif1aP33173 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC39,63■■■■□ 3,93
Kif1aP33173 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC39,62■■■■□ 3,93
Kif1aP33173 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC39,48■■■■□ 3,91
Kif1aP33173 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC39,45■■■■□ 3,91
Kif1aP33173 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC39,4■■■■□ 3,9
Kif1aP33173 Gm17082-201ENSMUST00000166043 1091 ntBASIC39,4■■■■□ 3,9
Kif1aP33173 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC39,38■■■■□ 3,89
Kif1aP33173 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC39,35■■■■□ 3,89
Kif1aP33173 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC39,34■■■■□ 3,89
Kif1aP33173 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC39,3■■■■□ 3,88
Kif1aP33173 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC39,29■■■■□ 3,88
Kif1aP33173 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC39,29■■■■□ 3,88
Kif1aP33173 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC39,25■■■■□ 3,87
Kif1aP33173 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC39,12■■■■□ 3,85
Kif1aP33173 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC39,05■■■■□ 3,84
Kif1aP33173 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC39,05■■■■□ 3,84
Kif1aP33173 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC39■■■■□ 3,83
Kif1aP33173 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC38,99■■■■□ 3,83
Kif1aP33173 Gm24804-201ENSMUST00000174982 85 ntBASIC38,89■■■■□ 3,82
Kif1aP33173 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC38,89■■■■□ 3,82
Kif1aP33173 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC38,84■■■■□ 3,81
Kif1aP33173 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC38,84■■■■□ 3,81
Kif1aP33173 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC38,84■■■■□ 3,81
Kif1aP33173 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC38,82■■■■□ 3,81
Kif1aP33173 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC38,79■■■■□ 3,8
Kif1aP33173 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC38,78■■■■□ 3,8
Retrieved 100 of 76,532 protein–RNA pairs in 12,3 ms