Protein–RNA interactions for Protein: P33173

Kif1a, Kinesin-like protein KIF1A, mousemouse

Predictions only

Length 1,695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kif1aP33173 Gm25239-201ENSMUST00000174915 86 ntBASIC54.22■■■■■ 6.27
Kif1aP33173 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC50.48■■■■■ 5.67
Kif1aP33173 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC49.42■■■■■ 5.5
Kif1aP33173 Gm24109-201ENSMUST00000175489 103 ntBASIC47.35■■■■■ 5.17
Kif1aP33173 Gm15042-201ENSMUST00000120212 883 ntBASIC47■■■■■ 5.12
Kif1aP33173 Gm15045-201ENSMUST00000117359 883 ntBASIC46.03■■■■■ 4.96
Kif1aP33173 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC45.85■■■■■ 4.93
Kif1aP33173 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC45.67■■■■■ 4.9
Kif1aP33173 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC45.58■■■■■ 4.89
Kif1aP33173 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC45.28■■■■■ 4.84
Kif1aP33173 Gm23366-201ENSMUST00000175022 89 ntBASIC45.19■■■■■ 4.83
Kif1aP33173 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC44.79■■■■■ 4.76
Kif1aP33173 AC153911.1-202ENSMUST00000218534 1034 ntBASIC44.19■■■■■ 4.66
Kif1aP33173 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC43.84■■■■■ 4.61
Kif1aP33173 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC43.78■■■■■ 4.6
Kif1aP33173 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC43.74■■■■■ 4.59
Kif1aP33173 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC43.69■■■■■ 4.58
Kif1aP33173 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC43.68■■■■■ 4.58
Kif1aP33173 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC43.32■■■■■ 4.53
Kif1aP33173 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC43.21■■■■■ 4.51
Kif1aP33173 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC43.21■■■■■ 4.51
Kif1aP33173 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC43.14■■■■■ 4.5
Kif1aP33173 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC43.05■■■■■ 4.48
Kif1aP33173 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC42.97■■■■■ 4.47
Kif1aP33173 Gm25238-201ENSMUST00000174914 89 ntBASIC42.89■■■■■ 4.46
Kif1aP33173 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC42.55■■■■■ 4.4
Kif1aP33173 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC42.41■■■■■ 4.38
Kif1aP33173 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC42.22■■■■■ 4.35
Kif1aP33173 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC42.2■■■■■ 4.35
Kif1aP33173 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC42.19■■■■■ 4.34
Kif1aP33173 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC42.01■■■■■ 4.32
Kif1aP33173 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC42■■■■■ 4.31
Kif1aP33173 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC41.84■■■■■ 4.29
Kif1aP33173 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC41.72■■■■■ 4.27
Kif1aP33173 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC41.71■■■■■ 4.27
Kif1aP33173 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC41.59■■■■■ 4.25
Kif1aP33173 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC41.58■■■■■ 4.25
Kif1aP33173 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC41.55■■■■■ 4.24
Kif1aP33173 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC41.46■■■■■ 4.23
Kif1aP33173 Gm25262-201ENSMUST00000174934 133 ntBASIC41.24■■■■■ 4.19
Kif1aP33173 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
Kif1aP33173 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC41.18■■■■■ 4.18
Kif1aP33173 Psd-208ENSMUST00000224556 2034 ntBASIC41.14■■■■■ 4.18
Kif1aP33173 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC41.04■■■■■ 4.16
Kif1aP33173 Gm27325-201ENSMUST00000175467 74 ntBASIC41.04■■■■■ 4.16
Kif1aP33173 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC41.04■■■■■ 4.16
Kif1aP33173 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC40.85■■■■■ 4.13
Kif1aP33173 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC40.84■■■■■ 4.13
Kif1aP33173 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC40.72■■■■■ 4.11
Kif1aP33173 Rab21-202ENSMUST00000218831 843 ntBASIC40.62■■■■■ 4.09
Kif1aP33173 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.09
Kif1aP33173 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC40.58■■■■■ 4.09
Kif1aP33173 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC40.55■■■■■ 4.08
Kif1aP33173 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC40.5■■■■■ 4.07
Kif1aP33173 Gm26115-201ENSMUST00000175605 87 ntBASIC40.45■■■■■ 4.07
Kif1aP33173 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC40.29■■■■■ 4.04
Kif1aP33173 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC40.29■■■■■ 4.04
Kif1aP33173 Gm8109-201ENSMUST00000194076 746 ntBASIC40.29■■■■■ 4.04
Kif1aP33173 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC40.29■■■■■ 4.04
Kif1aP33173 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC40.17■■■■■ 4.02
Kif1aP33173 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC40.17■■■■■ 4.02
Kif1aP33173 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC40.15■■■■■ 4.02
Kif1aP33173 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC40.13■■■■■ 4.01
Kif1aP33173 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC40.05■■■■■ 4
Kif1aP33173 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC40.01■■■■■ 4
Kif1aP33173 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
Kif1aP33173 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC39.89■■■■□ 3.98
Kif1aP33173 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC39.84■■■■□ 3.97
Kif1aP33173 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC39.81■■■■□ 3.96
Kif1aP33173 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
Kif1aP33173 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
Kif1aP33173 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC39.72■■■■□ 3.95
Kif1aP33173 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC39.71■■■■□ 3.95
Kif1aP33173 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
Kif1aP33173 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC39.63■■■■□ 3.93
Kif1aP33173 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
Kif1aP33173 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC39.48■■■■□ 3.91
Kif1aP33173 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC39.45■■■■□ 3.91
Kif1aP33173 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC39.4■■■■□ 3.9
Kif1aP33173 Gm17082-201ENSMUST00000166043 1091 ntBASIC39.4■■■■□ 3.9
Kif1aP33173 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC39.38■■■■□ 3.89
Kif1aP33173 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC39.35■■■■□ 3.89
Kif1aP33173 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC39.34■■■■□ 3.89
Kif1aP33173 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC39.3■■■■□ 3.88
Kif1aP33173 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC39.29■■■■□ 3.88
Kif1aP33173 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC39.29■■■■□ 3.88
Kif1aP33173 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
Kif1aP33173 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC39.12■■■■□ 3.85
Kif1aP33173 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC39.05■■■■□ 3.84
Kif1aP33173 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
Kif1aP33173 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC39■■■■□ 3.83
Kif1aP33173 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
Kif1aP33173 Gm24804-201ENSMUST00000174982 85 ntBASIC38.89■■■■□ 3.82
Kif1aP33173 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC38.89■■■■□ 3.82
Kif1aP33173 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC38.84■■■■□ 3.81
Kif1aP33173 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC38.84■■■■□ 3.81
Kif1aP33173 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
Kif1aP33173 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC38.82■■■■□ 3.81
Kif1aP33173 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC38.79■■■■□ 3.8
Kif1aP33173 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms