Protein–RNA interactions for Protein: O88572

Lrp6, Low-density lipoprotein receptor-related protein 6, mousemouse

Predictions only

Length 1,613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrp6O88572 Gm25239-201ENSMUST00000174915 86 ntBASIC54.56■■■■■ 6.33
Lrp6O88572 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC51.03■■■■■ 5.76
Lrp6O88572 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC49.93■■■■■ 5.58
Lrp6O88572 Gm24109-201ENSMUST00000175489 103 ntBASIC47.89■■■■■ 5.26
Lrp6O88572 Gm15042-201ENSMUST00000120212 883 ntBASIC46.65■■■■■ 5.06
Lrp6O88572 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC46.14■■■■■ 4.98
Lrp6O88572 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC46.06■■■■■ 4.96
Lrp6O88572 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC45.94■■■■■ 4.94
Lrp6O88572 Gm15045-201ENSMUST00000117359 883 ntBASIC45.58■■■■■ 4.89
Lrp6O88572 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC45.53■■■■■ 4.88
Lrp6O88572 Gm23366-201ENSMUST00000175022 89 ntBASIC45.34■■■■■ 4.85
Lrp6O88572 AC153911.1-202ENSMUST00000218534 1034 ntBASIC45■■■■■ 4.79
Lrp6O88572 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC44.64■■■■■ 4.74
Lrp6O88572 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC44.57■■■■■ 4.72
Lrp6O88572 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC44.5■■■■■ 4.71
Lrp6O88572 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC44.47■■■■■ 4.71
Lrp6O88572 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC43.62■■■■■ 4.57
Lrp6O88572 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC43.53■■■■■ 4.56
Lrp6O88572 Gm25238-201ENSMUST00000174914 89 ntBASIC43.42■■■■■ 4.54
Lrp6O88572 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC43.4■■■■■ 4.54
Lrp6O88572 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC43.33■■■■■ 4.53
Lrp6O88572 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC43.11■■■■■ 4.49
Lrp6O88572 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC42.49■■■■■ 4.39
Lrp6O88572 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC42.46■■■■■ 4.39
Lrp6O88572 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC42.24■■■■■ 4.35
Lrp6O88572 Gm25262-201ENSMUST00000174934 133 ntBASIC41.97■■■■■ 4.31
Lrp6O88572 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC41.77■■■■■ 4.28
Lrp6O88572 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41.73■■■■■ 4.27
Lrp6O88572 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC41.62■■■■■ 4.25
Lrp6O88572 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC41.62■■■■■ 4.25
Lrp6O88572 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC41.58■■■■■ 4.25
Lrp6O88572 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC41.52■■■■■ 4.24
Lrp6O88572 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC41.47■■■■■ 4.23
Lrp6O88572 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC41.37■■■■■ 4.21
Lrp6O88572 Gm26115-201ENSMUST00000175605 87 ntBASIC41.37■■■■■ 4.21
Lrp6O88572 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
Lrp6O88572 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
Lrp6O88572 Gm8109-201ENSMUST00000194076 746 ntBASIC41.15■■■■■ 4.18
Lrp6O88572 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC41.1■■■■■ 4.17
Lrp6O88572 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC41.07■■■■■ 4.16
Lrp6O88572 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC41.02■■■■■ 4.16
Lrp6O88572 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC40.99■■■■■ 4.15
Lrp6O88572 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC40.94■■■■■ 4.14
Lrp6O88572 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC40.82■■■■■ 4.12
Lrp6O88572 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC40.68■■■■■ 4.1
Lrp6O88572 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC40.65■■■■■ 4.1
Lrp6O88572 Gm27325-201ENSMUST00000175467 74 ntBASIC40.65■■■■■ 4.1
Lrp6O88572 Rab21-202ENSMUST00000218831 843 ntBASIC40.6■■■■■ 4.09
Lrp6O88572 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC40.59■■■■■ 4.09
Lrp6O88572 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC40.58■■■■■ 4.09
Lrp6O88572 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC40.43■■■■■ 4.06
Lrp6O88572 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC40.4■■■■■ 4.06
Lrp6O88572 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC40.39■■■■■ 4.06
Lrp6O88572 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC40.36■■■■■ 4.05
Lrp6O88572 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC40.28■■■■■ 4.04
Lrp6O88572 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC40.22■■■■■ 4.03
Lrp6O88572 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC40.03■■■■■ 4
Lrp6O88572 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC39.95■■■■□ 3.99
Lrp6O88572 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
Lrp6O88572 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
Lrp6O88572 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
Lrp6O88572 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
Lrp6O88572 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
Lrp6O88572 Gm24804-201ENSMUST00000174982 85 ntBASIC39.69■■■■□ 3.94
Lrp6O88572 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
Lrp6O88572 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC39.6■■■■□ 3.93
Lrp6O88572 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC39.6■■■■□ 3.93
Lrp6O88572 Gm17082-201ENSMUST00000166043 1091 ntBASIC39.57■■■■□ 3.92
Lrp6O88572 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC39.35■■■■□ 3.89
Lrp6O88572 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC39.29■■■■□ 3.88
Lrp6O88572 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC39.28■■■■□ 3.88
Lrp6O88572 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC39.21■■■■□ 3.87
Lrp6O88572 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC39.18■■■■□ 3.86
Lrp6O88572 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC39.14■■■■□ 3.86
Lrp6O88572 Zfp131-205ENSMUST00000223812 663 ntBASIC39.08■■■■□ 3.85
Lrp6O88572 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC39.06■■■■□ 3.84
Lrp6O88572 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC39.03■■■■□ 3.84
Lrp6O88572 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC39.03■■■■□ 3.84
Lrp6O88572 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC38.97■■■■□ 3.83
Lrp6O88572 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC38.93■■■■□ 3.82
Lrp6O88572 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC38.92■■■■□ 3.82
Lrp6O88572 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
Lrp6O88572 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC38.91■■■■□ 3.82
Lrp6O88572 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Lrp6O88572 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Lrp6O88572 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
Lrp6O88572 Gm27322-201ENSMUST00000184007 104 ntBASIC38.79■■■■□ 3.8
Lrp6O88572 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
Lrp6O88572 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
Lrp6O88572 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
Lrp6O88572 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
Lrp6O88572 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC38.72■■■■□ 3.79
Lrp6O88572 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC38.71■■■■□ 3.79
Lrp6O88572 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
Lrp6O88572 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC38.67■■■■□ 3.78
Lrp6O88572 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC38.62■■■■□ 3.77
Lrp6O88572 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC38.61■■■■□ 3.77
Lrp6O88572 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC38.56■■■■□ 3.76
Lrp6O88572 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC38.55■■■■□ 3.76
Lrp6O88572 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC38.53■■■■□ 3.76
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms