Protein–RNA interactions for Protein: Q8BT42

Smim5, Small integral membrane protein 5, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim5Q8BT42 Gm25239-201ENSMUST00000174915 86 ntBASIC54.3■■■■■ 6.28
Smim5Q8BT42 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC50.64■■■■■ 5.7
Smim5Q8BT42 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC49.7■■■■■ 5.55
Smim5Q8BT42 Gm24109-201ENSMUST00000175489 103 ntBASIC47.51■■■■■ 5.2
Smim5Q8BT42 Gm15042-201ENSMUST00000120212 883 ntBASIC46.54■■■■■ 5.04
Smim5Q8BT42 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC45.87■■■■■ 4.93
Smim5Q8BT42 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC45.68■■■■■ 4.9
Smim5Q8BT42 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC45.63■■■■■ 4.9
Smim5Q8BT42 Gm15045-201ENSMUST00000117359 883 ntBASIC45.45■■■■■ 4.87
Smim5Q8BT42 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC45.45■■■■■ 4.87
Smim5Q8BT42 Gm23366-201ENSMUST00000175022 89 ntBASIC45.12■■■■■ 4.81
Smim5Q8BT42 AC153911.1-202ENSMUST00000218534 1034 ntBASIC44.66■■■■■ 4.74
Smim5Q8BT42 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC44.18■■■■■ 4.66
Smim5Q8BT42 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC44.17■■■■■ 4.66
Smim5Q8BT42 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC44.15■■■■■ 4.66
Smim5Q8BT42 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC44.01■■■■■ 4.64
Smim5Q8BT42 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC43.55■■■■■ 4.56
Smim5Q8BT42 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC43.36■■■■■ 4.53
Smim5Q8BT42 Gm25238-201ENSMUST00000174914 89 ntBASIC43.2■■■■■ 4.51
Smim5Q8BT42 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC43.14■■■■■ 4.5
Smim5Q8BT42 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC43.07■■■■■ 4.49
Smim5Q8BT42 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC43.05■■■■■ 4.48
Smim5Q8BT42 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC42.23■■■■■ 4.35
Smim5Q8BT42 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC42.09■■■■■ 4.33
Smim5Q8BT42 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC42.08■■■■■ 4.33
Smim5Q8BT42 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC41.97■■■■■ 4.31
Smim5Q8BT42 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC41.96■■■■■ 4.31
Smim5Q8BT42 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC41.83■■■■■ 4.29
Smim5Q8BT42 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC41.67■■■■■ 4.26
Smim5Q8BT42 Gm25262-201ENSMUST00000174934 133 ntBASIC41.65■■■■■ 4.26
Smim5Q8BT42 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC41.46■■■■■ 4.23
Smim5Q8BT42 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC41.43■■■■■ 4.22
Smim5Q8BT42 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC41.4■■■■■ 4.22
Smim5Q8BT42 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC41.24■■■■■ 4.19
Smim5Q8BT42 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC41.13■■■■■ 4.18
Smim5Q8BT42 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC41.09■■■■■ 4.17
Smim5Q8BT42 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC41.08■■■■■ 4.17
Smim5Q8BT42 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC41.03■■■■■ 4.16
Smim5Q8BT42 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC41.02■■■■■ 4.16
Smim5Q8BT42 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC41.02■■■■■ 4.16
Smim5Q8BT42 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC41■■■■■ 4.15
Smim5Q8BT42 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC41■■■■■ 4.15
Smim5Q8BT42 Gm26115-201ENSMUST00000175605 87 ntBASIC40.97■■■■■ 4.15
Smim5Q8BT42 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC40.87■■■■■ 4.13
Smim5Q8BT42 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC40.78■■■■■ 4.12
Smim5Q8BT42 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC40.77■■■■■ 4.12
Smim5Q8BT42 Gm8109-201ENSMUST00000194076 746 ntBASIC40.75■■■■■ 4.11
Smim5Q8BT42 Gm27325-201ENSMUST00000175467 74 ntBASIC40.65■■■■■ 4.1
Smim5Q8BT42 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC40.63■■■■■ 4.09
Smim5Q8BT42 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC40.6■■■■■ 4.09
Smim5Q8BT42 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC40.48■■■■■ 4.07
Smim5Q8BT42 Rab21-202ENSMUST00000218831 843 ntBASIC40.42■■■■■ 4.06
Smim5Q8BT42 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC40.42■■■■■ 4.06
Smim5Q8BT42 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC40.25■■■■■ 4.03
Smim5Q8BT42 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC40.2■■■■■ 4.03
Smim5Q8BT42 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC40.13■■■■■ 4.02
Smim5Q8BT42 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC40.12■■■■■ 4.01
Smim5Q8BT42 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC40■■■■□ 3.99
Smim5Q8BT42 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
Smim5Q8BT42 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC39.83■■■■□ 3.97
Smim5Q8BT42 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC39.81■■■■□ 3.96
Smim5Q8BT42 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC39.77■■■■□ 3.96
Smim5Q8BT42 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
Smim5Q8BT42 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC39.61■■■■□ 3.93
Smim5Q8BT42 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC39.57■■■■□ 3.92
Smim5Q8BT42 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC39.51■■■■□ 3.91
Smim5Q8BT42 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC39.46■■■■□ 3.91
Smim5Q8BT42 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC39.46■■■■□ 3.91
Smim5Q8BT42 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
Smim5Q8BT42 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC39.36■■■■□ 3.89
Smim5Q8BT42 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC39.35■■■■□ 3.89
Smim5Q8BT42 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC39.35■■■■□ 3.89
Smim5Q8BT42 Gm24804-201ENSMUST00000174982 85 ntBASIC39.31■■■■□ 3.88
Smim5Q8BT42 Gm17082-201ENSMUST00000166043 1091 ntBASIC39.26■■■■□ 3.88
Smim5Q8BT42 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC39.18■■■■□ 3.86
Smim5Q8BT42 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC39.15■■■■□ 3.86
Smim5Q8BT42 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
Smim5Q8BT42 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC38.96■■■■□ 3.83
Smim5Q8BT42 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
Smim5Q8BT42 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC38.85■■■■□ 3.81
Smim5Q8BT42 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC38.83■■■■□ 3.81
Smim5Q8BT42 Gm27322-201ENSMUST00000184007 104 ntBASIC38.76■■■■□ 3.8
Smim5Q8BT42 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC38.75■■■■□ 3.79
Smim5Q8BT42 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC38.73■■■■□ 3.79
Smim5Q8BT42 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC38.66■■■■□ 3.78
Smim5Q8BT42 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
Smim5Q8BT42 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC38.63■■■■□ 3.78
Smim5Q8BT42 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
Smim5Q8BT42 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC38.61■■■■□ 3.77
Smim5Q8BT42 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC38.61■■■■□ 3.77
Smim5Q8BT42 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC38.6■■■■□ 3.77
Smim5Q8BT42 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC38.6■■■■□ 3.77
Smim5Q8BT42 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.76
Smim5Q8BT42 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC38.57■■■■□ 3.76
Smim5Q8BT42 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC38.57■■■■□ 3.76
Smim5Q8BT42 Psd-208ENSMUST00000224556 2034 ntBASIC38.56■■■■□ 3.76
Smim5Q8BT42 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC38.53■■■■□ 3.76
Smim5Q8BT42 Zfp131-205ENSMUST00000223812 663 ntBASIC38.52■■■■□ 3.76
Smim5Q8BT42 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
Smim5Q8BT42 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC38.41■■■■□ 3.74
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms