RNA–Protein interactions for RNA: YKR009C

FOX2, Transcript of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase, yeastyeast

Gene FOX2, Length 2,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOX2YKR009C YOL057WQ08225 711 aa5.5□□□□□ -1.53
FOX2YKR009C COQ4O13525 335 aa5.49□□□□□ -1.53
FOX2YKR009C ICL1P28240 557 aaPredicted RBP5.49□□□□□ -1.53
FOX2YKR009C RTG2P32608 588 aaKnown RBP5.49□□□□□ -1.53
FOX2YKR009C RTR1P40084 226 aaPredicted RBP5.49□□□□□ -1.53
FOX2YKR009C THI22Q06490 572 aa5.49□□□□□ -1.53
FOX2YKR009C APL2P36000 726 aaPredicted RBP5.48□□□□□ -1.53
FOX2YKR009C YDR306CQ06640 478 aa5.48□□□□□ -1.53
FOX2YKR009C BMS1Q08965 1183 aaKnown RBP5.48□□□□□ -1.53
FOX2YKR009C DUR1,2P32528 1835 aaKnown RBP5.48□□□□□ -1.53
FOX2YKR009C SLI15P38283 698 aa5.47□□□□□ -1.53
FOX2YKR009C SET1P38827 1080 aaKnown RBP5.47□□□□□ -1.53
FOX2YKR009C HEF3P53978 1044 aaKnown RBP5.47□□□□□ -1.53
FOX2YKR009C SAC3P46674 1301 aa5.47□□□□□ -1.53
FOX2YKR009C GYP7P48365 746 aa5.47□□□□□ -1.53
FOX2YKR009C DPL1Q05567 589 aa5.47□□□□□ -1.53
FOX2YKR009C SWI1P09547 1314 aa5.47□□□□□ -1.53
FOX2YKR009C GLC3P32775 704 aa5.46□□□□□ -1.53
FOX2YKR009C TYW1Q08960 810 aaKnown RBP5.46□□□□□ -1.53
FOX2YKR009C DNM1P54861 757 aa5.46□□□□□ -1.54
FOX2YKR009C ETP1P38748 585 aaKnown RBP5.46□□□□□ -1.54
FOX2YKR009C RTT109Q07794 436 aa5.46□□□□□ -1.54
FOX2YKR009C TOP1P04786 769 aa5.45□□□□□ -1.54
FOX2YKR009C FRD1P32614 470 aaKnown RBP5.45□□□□□ -1.54
FOX2YKR009C ZDS2P54786 942 aa5.45□□□□□ -1.54
FOX2YKR009C THS1P04801 734 aaKnown RBP5.45□□□□□ -1.54
FOX2YKR009C CAF20P12962 161 aaKnown RBP5.45□□□□□ -1.54
FOX2YKR009C CST6P40535 587 aa5.45□□□□□ -1.54
FOX2YKR009C UBX2Q04228 584 aa5.45□□□□□ -1.54
FOX2YKR009C RPN1P38764 993 aaKnown RBP5.44□□□□□ -1.54
FOX2YKR009C TIM50Q02776 476 aa5.44□□□□□ -1.54
FOX2YKR009C GSC2P40989 1895 aa5.43□□□□□ -1.54
FOX2YKR009C MSM1P22438 575 aa5.43□□□□□ -1.54
FOX2YKR009C SPT21P35209 758 aa5.43□□□□□ -1.54
FOX2YKR009C SAS4Q04003 481 aa5.43□□□□□ -1.54
FOX2YKR009C KRE2P27809 442 aa5.43□□□□□ -1.54
FOX2YKR009C YIL089WP40500 205 aa5.43□□□□□ -1.54
FOX2YKR009C ICP55P40051 511 aa5.42□□□□□ -1.54
FOX2YKR009C MPP10P47083 593 aaKnown RBP5.42□□□□□ -1.54
FOX2YKR009C DUS1P53759 423 aaKnown RBP5.42□□□□□ -1.54
FOX2YKR009C SRT1Q03175 343 aa5.42□□□□□ -1.54
FOX2YKR009C VPS64Q03944 604 aa5.42□□□□□ -1.54
FOX2YKR009C DPH6Q12429 685 aa5.42□□□□□ -1.54
FOX2YKR009C TRP5P00931 707 aaKnown RBP5.42□□□□□ -1.54
FOX2YKR009C NSR1P27476 414 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
FOX2YKR009C FET4P40988 552 aa5.42□□□□□ -1.54
FOX2YKR009C SET4P42948 560 aa5.42□□□□□ -1.54
FOX2YKR009C YGR117CP53270 476 aa5.42□□□□□ -1.54
FOX2YKR009C MTC5Q03897 1148 aa5.42□□□□□ -1.54
FOX2YKR009C RPP0P05317 312 aaKnown RBP5.41□□□□□ -1.54
FOX2YKR009C VHR2P40041 505 aa5.41□□□□□ -1.54
FOX2YKR009C EMP47P43555 445 aa5.41□□□□□ -1.54
FOX2YKR009C TSR3Q12094 313 aaKnown RBP5.41□□□□□ -1.54
FOX2YKR009C PEA2P40091 420 aa5.4□□□□□ -1.54
FOX2YKR009C RPL17AP05740 184 aaKnown RBP5.4□□□□□ -1.55
FOX2YKR009C MRP7P12687 371 aa5.4□□□□□ -1.55
FOX2YKR009C SPL2P38839 148 aa5.4□□□□□ -1.55
FOX2YKR009C RPL17BP46990 184 aaKnown RBP5.4□□□□□ -1.55
FOX2YKR009C ITC1P53125 1264 aa5.4□□□□□ -1.55
FOX2YKR009C CRF1Q04930 467 aa5.4□□□□□ -1.55
FOX2YKR009C FCP1Q03254 732 aa5.39□□□□□ -1.55
FOX2YKR009C YDL144CQ07589 356 aa5.39□□□□□ -1.55
FOX2YKR009C GAP1P19145 602 aaPredicted RBP5.39□□□□□ -1.55
FOX2YKR009C TIF4632P39936 914 aaKnown RBP5.39□□□□□ -1.55
FOX2YKR009C PRY3P47033 881 aa5.39□□□□□ -1.55
FOX2YKR009C GAS5Q08193 484 aa5.39□□□□□ -1.55
FOX2YKR009C RRG1Q12167 365 aaPredicted RBP5.39□□□□□ -1.55
FOX2YKR009C TPD3P31383 635 aa5.39□□□□□ -1.55
FOX2YKR009C SRF1Q12516 437 aa5.38□□□□□ -1.55
FOX2YKR009C FLO11P08640 1367 aa5.38□□□□□ -1.55
FOX2YKR009C YBR287WP38355 427 aa5.38□□□□□ -1.55
FOX2YKR009C ADR1P07248 1323 aa5.38□□□□□ -1.55
FOX2YKR009C HVG1P0CE11 249 aa5.37□□□□□ -1.55
FOX2YKR009C MGM1P32266 881 aa5.37□□□□□ -1.55
FOX2YKR009C UTP7P40055 554 aaKnown RBP5.37□□□□□ -1.55
FOX2YKR009C PKH1Q03407 766 aa5.37□□□□□ -1.55
FOX2YKR009C CWC15Q03772 175 aaKnown RBP5.37□□□□□ -1.55
FOX2YKR009C NUP133P36161 1157 aa5.37□□□□□ -1.55
FOX2YKR009C YJL171CP46992 396 aa5.37□□□□□ -1.55
FOX2YKR009C LCB1P25045 558 aaKnown RBP5.36□□□□□ -1.55
FOX2YKR009C NUG1P40010 520 aaKnown RBP5.36□□□□□ -1.55
FOX2YKR009C YPP1P46951 817 aa5.36□□□□□ -1.55
FOX2YKR009C RPT4P53549 437 aaKnown RBP5.36□□□□□ -1.55
FOX2YKR009C TRM44Q02648 567 aaKnown RBP5.36□□□□□ -1.55
FOX2YKR009C AFG2P32794 780 aa5.36□□□□□ -1.55
FOX2YKR009C STV1P37296 890 aa5.36□□□□□ -1.55
FOX2YKR009C PRP42Q03776 544 aaKnown RBP5.36□□□□□ -1.55
FOX2YKR009C PSF3Q12146 194 aa5.36□□□□□ -1.55
FOX2YKR009C PSH1Q12161 406 aa5.36□□□□□ -1.55
FOX2YKR009C SUI2P20459 304 aaKnown RBP5.35□□□□□ -1.55
FOX2YKR009C UBP12P39538 1254 aa5.35□□□□□ -1.55
FOX2YKR009C THI3Q07471 609 aa5.35□□□□□ -1.55
FOX2YKR009C BSD2P38356 321 aa5.35□□□□□ -1.55
FOX2YKR009C RRT6P53117 311 aaPredicted RBP5.35□□□□□ -1.55
FOX2YKR009C ARG82P07250 355 aa5.34□□□□□ -1.55
FOX2YKR009C VPS4P52917 437 aa5.34□□□□□ -1.55
FOX2YKR009C MTC3P53077 123 aa5.34□□□□□ -1.55
FOX2YKR009C TIF6Q12522 245 aaKnown RBP5.34□□□□□ -1.55
FOX2YKR009C HPR1P17629 752 aaKnown RBP5.34□□□□□ -1.55
FOX2YKR009C BOI2P39969 1040 aa5.34□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 62.7 ms