Protein–RNA interactions for Protein: P53125

ITC1, Imitation switch two complex protein 1, yeastyeast

Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ITC1P53125 YML009W-BYML009W-B 477 nt25.16■■□□□ 1.62
ITC1P53125 NSR1YGR159C 1245 nt24.76■■□□□ 1.55
ITC1P53125 NOP1YDL014W 984 nt24.51■■□□□ 1.51
ITC1P53125 YKL036CYKL036C 393 nt22.87■■□□□ 1.25
ITC1P53125 MDJ1YFL016C 1536 nt21.81■■□□□ 1.08
ITC1P53125 Q0297Q0297 156 nt21.56■■□□□ 1.04
ITC1P53125 SRX1YKL086W 384 nt21.44■■□□□ 1.02
ITC1P53125 YJL027CYJL027C 417 nt21.41■■□□□ 1.02
ITC1P53125 SCS3YGL126W 1143 nt20.96■□□□□ 0.95
ITC1P53125 YCR051WYCR051W 669 nt20.4■□□□□ 0.86
ITC1P53125 YOL085CYOL085C 342 nt19.83■□□□□ 0.77
ITC1P53125 PKP1YIL042C 1185 nt19.55■□□□□ 0.72
ITC1P53125 DBP2YNL112W 1641 nt19.4■□□□□ 0.7
ITC1P53125 RPP1BYDL130W 321 nt19.36■□□□□ 0.69
ITC1P53125 TRN1tP(UGG)A 72 nt19.24■□□□□ 0.67
ITC1P53125 SUF9tP(UGG)F 72 nt19.24■□□□□ 0.67
ITC1P53125 SUF8tP(UGG)H 72 nt19.24■□□□□ 0.67
ITC1P53125 tP(UGG)LtP(UGG)L 72 nt19.24■□□□□ 0.67
ITC1P53125 SUF7tP(UGG)M 72 nt19.24■□□□□ 0.67
ITC1P53125 tP(UGG)N1tP(UGG)N1 72 nt19.24■□□□□ 0.67
ITC1P53125 tP(UGG)N2tP(UGG)N2 72 nt19.24■□□□□ 0.67
ITC1P53125 tP(UGG)O1tP(UGG)O1 72 nt19.24■□□□□ 0.67
ITC1P53125 SUF11tP(UGG)O2 72 nt19.24■□□□□ 0.67
ITC1P53125 CCC1YLR220W 969 nt19.12■□□□□ 0.65
ITC1P53125 ATS1YAL020C 1002 nt18.82■□□□□ 0.6
ITC1P53125 SCJ1YMR214W 1134 nt18.8■□□□□ 0.6
ITC1P53125 PET122YER153C 765 nt18.49■□□□□ 0.55
ITC1P53125 YBR190WYBR190W 312 nt18.48■□□□□ 0.55
ITC1P53125 SCR1SCR1 522 nt18.31■□□□□ 0.52
ITC1P53125 tP(UGG)O3tP(UGG)O3 72 nt18.3■□□□□ 0.52
ITC1P53125 RVS167YDR388W 1449 nt18.22■□□□□ 0.51
ITC1P53125 RTC3YHR087W 336 nt18.13■□□□□ 0.49
ITC1P53125 RRN5YLR141W 1092 nt17.99■□□□□ 0.47
ITC1P53125 RSB1YOR049C 1065 nt17.68■□□□□ 0.42
ITC1P53125 YDJ1YNL064C 1230 nt17.67■□□□□ 0.42
ITC1P53125 SHR5YOL110W 714 nt17.67■□□□□ 0.42
ITC1P53125 YER088W-BYER088W-B 147 nt17.64■□□□□ 0.41
ITC1P53125 PST2YDR032C 597 nt17.4■□□□□ 0.38
ITC1P53125 GAR1YHR089C 618 nt17.29■□□□□ 0.36
ITC1P53125 DEP1YAL013W 1218 nt17.16■□□□□ 0.34
ITC1P53125 URN1YPR152C 1398 nt17.05■□□□□ 0.32
ITC1P53125 PUT4YOR348C 1884 nt17.02■□□□□ 0.32
ITC1P53125 SSA3YBL075C 1950 nt16.97■□□□□ 0.31
ITC1P53125 YNL208WYNL208W 600 nt16.85■□□□□ 0.29
ITC1P53125 YKL097CYKL097C 411 nt16.81■□□□□ 0.28
ITC1P53125 RPN10YHR200W 807 nt16.79■□□□□ 0.28
ITC1P53125 OPI9YLR338W 858 nt16.73■□□□□ 0.27
ITC1P53125 TIR1YER011W 765 nt16.69■□□□□ 0.26
ITC1P53125 SHU1YHL006C 453 nt16.65■□□□□ 0.26
ITC1P53125 SAH1YER043C 1350 nt16.62■□□□□ 0.25
ITC1P53125 ARE1YCR048W 1833 nt16.58■□□□□ 0.24
ITC1P53125 SSA1YAL005C 1929 nt16.46■□□□□ 0.23
ITC1P53125 POA1YBR022W 534 nt16.44■□□□□ 0.22
ITC1P53125 YAL037C-BYAL037C-B 975 nt16.38■□□□□ 0.21
ITC1P53125 YHR049C-AYHR049C-A 297 nt16.35■□□□□ 0.21
ITC1P53125 SRB2YHR041C 633 nt16.28■□□□□ 0.2
ITC1P53125 YJR018WYJR018W 363 nt16.28■□□□□ 0.2
ITC1P53125 PUN1YLR414C 792 nt16.22■□□□□ 0.19
ITC1P53125 BSC6YOL137W 1494 nt16.17■□□□□ 0.18
ITC1P53125 YOR139CYOR139C 393 nt16.14■□□□□ 0.17
ITC1P53125 YJR120WYJR120W 351 nt16.11■□□□□ 0.17
ITC1P53125 PTC2YER089C 1395 nt16.04■□□□□ 0.16
ITC1P53125 WWM1YFL010C 636 nt16.03■□□□□ 0.16
ITC1P53125 RPP2BYDR382W 333 nt15.98■□□□□ 0.15
ITC1P53125 BUD23YCR047C 828 nt15.93■□□□□ 0.14
ITC1P53125 MNP1YGL068W 585 nt15.92■□□□□ 0.14
ITC1P53125 YGR021WYGR021W 873 nt15.92■□□□□ 0.14
ITC1P53125 HOM6YJR139C 1080 nt15.92■□□□□ 0.14
ITC1P53125 NPL3YDR432W 1245 nt15.9■□□□□ 0.14
ITC1P53125 SPT5YML010W 3192 nt15.78■□□□□ 0.12
ITC1P53125 NAB2YGL122C 1578 nt15.76■□□□□ 0.11
ITC1P53125 BDH2YAL061W 1254 nt15.72■□□□□ 0.11
ITC1P53125 YFL021C-AYFL021C-A 855 nt15.7■□□□□ 0.1
ITC1P53125 RKM5YLR137W 1104 nt15.69■□□□□ 0.1
ITC1P53125 YOL037CYOL037C 354 nt15.67■□□□□ 0.1
ITC1P53125 INM2YDR287W 879 nt15.64■□□□□ 0.09
ITC1P53125 FPR4YLR449W 1179 nt15.62■□□□□ 0.09
ITC1P53125 DAL1YIR027C 1383 nt15.6■□□□□ 0.09
ITC1P53125 FIS1YIL065C 468 nt15.57■□□□□ 0.08
ITC1P53125 LSM3YLR438C-A 270 nt15.55■□□□□ 0.08
ITC1P53125 YBL100CYBL100C 315 nt15.55■□□□□ 0.08
ITC1P53125 tM(CAU)CtM(CAU)C 72 nt15.49■□□□□ 0.07
ITC1P53125 IMT4tM(CAU)E 72 nt15.49■□□□□ 0.07
ITC1P53125 IMT3tM(CAU)J3 72 nt15.49■□□□□ 0.07
ITC1P53125 IMT1tM(CAU)O1 72 nt15.49■□□□□ 0.07
ITC1P53125 IMT2tM(CAU)P 72 nt15.49■□□□□ 0.07
ITC1P53125 PHO4YFR034C 939 nt15.47■□□□□ 0.07
ITC1P53125 SSA4YER103W 1929 nt15.41■□□□□ 0.06
ITC1P53125 TRM9YML014W 840 nt15.4■□□□□ 0.06
ITC1P53125 FUN26YAL022C 1554 nt15.39■□□□□ 0.05
ITC1P53125 YLR281CYLR281C 468 nt15.35■□□□□ 0.05
ITC1P53125 PUS2YGL063W 1113 nt15.3■□□□□ 0.04
ITC1P53125 WHI5YOR083W 888 nt15.27■□□□□ 0.04
ITC1P53125 MEP2YNL142W 1500 nt15.23■□□□□ 0.03
ITC1P53125 CCT6YDR188W 1641 nt15.21■□□□□ 0.03
ITC1P53125 YPS1YLR120C 1710 nt15.14■□□□□ 0.01
ITC1P53125 ALF1YNL148C 765 nt15.09■□□□□ 0.01
ITC1P53125 YLR154C-GYLR154C-G 150 nt15.06■□□□□ 0
ITC1P53125 SUF2tP(AGG)C 72 nt15.03■□□□□ -0
ITC1P53125 SUF10tP(AGG)N 72 nt15.03■□□□□ -0
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms