RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C YJR056CP47115 236 aa2.41□□□□□ -2.02
SSN2YDR443C ADO1P47143 340 aaKnown RBP2.41□□□□□ -2.02
SSN2YDR443C YPT32P51996 222 aaKnown RBP2.41□□□□□ -2.02
SSN2YDR443C SCW11P53189 542 aa2.41□□□□□ -2.02
SSN2YDR443C BIO4P53630 237 aa2.41□□□□□ -2.02
SSN2YDR443C IBD2P53892 351 aa2.41□□□□□ -2.02
SSN2YDR443C SED5Q01590 340 aa2.41□□□□□ -2.02
SSN2YDR443C WTM1Q12363 437 aaKnown RBP2.41□□□□□ -2.02
SSN2YDR443C Q0010Q9ZZX9 128 aa2.41□□□□□ -2.02
SSN2YDR443C AUS1Q08409 1394 aa2.41□□□□□ -2.02
SSN2YDR443C YER145C-AA0A023PYF4 145 aa2.41□□□□□ -2.02
SSN2YDR443C CHO1P08456 276 aa2.41□□□□□ -2.02
SSN2YDR443C CUP2P15315 225 aa2.41□□□□□ -2.02
SSN2YDR443C FUN19P28003 413 aaPredicted RBP2.41□□□□□ -2.02
SSN2YDR443C IDP2P41939 412 aa2.41□□□□□ -2.02
SSN2YDR443C YGR042WP53227 271 aa2.41□□□□□ -2.02
SSN2YDR443C YTP1P53584 459 aa2.41□□□□□ -2.02
SSN2YDR443C SLD5Q03406 294 aa2.41□□□□□ -2.02
SSN2YDR443C CAC2Q04199 468 aa2.41□□□□□ -2.02
SSN2YDR443C YDL086WQ07505 273 aa2.41□□□□□ -2.02
SSN2YDR443C YOR338WQ99326 363 aa2.41□□□□□ -2.02
SSN2YDR443C SKN1P33336 771 aa2.4□□□□□ -2.02
SSN2YDR443C SHP1P34223 423 aa2.4□□□□□ -2.02
SSN2YDR443C FZO1P38297 855 aa2.4□□□□□ -2.02
SSN2YDR443C TDA11P38854 504 aa2.4□□□□□ -2.02
SSN2YDR443C ATG7P38862 630 aa2.4□□□□□ -2.02
SSN2YDR443C PEX7P39108 375 aa2.4□□□□□ -2.02
SSN2YDR443C YJR154WP47181 346 aa2.4□□□□□ -2.02
SSN2YDR443C ALG13P53178 202 aa2.4□□□□□ -2.02
SSN2YDR443C RIM8P53179 542 aa2.4□□□□□ -2.02
SSN2YDR443C YPR003CP53394 754 aa2.4□□□□□ -2.02
SSN2YDR443C SNO1Q03144 224 aa2.4□□□□□ -2.02
SSN2YDR443C GCN5Q03330 439 aa2.4□□□□□ -2.02
SSN2YDR443C SPC24Q04477 213 aa2.4□□□□□ -2.02
SSN2YDR443C BER1Q06688 274 aaKnown RBP2.4□□□□□ -2.02
SSN2YDR443C LDS2Q08218 356 aa2.4□□□□□ -2.02
SSN2YDR443C SWI1P09547 1314 aa2.4□□□□□ -2.02
SSN2YDR443C SAT4P25333 603 aaKnown RBP2.4□□□□□ -2.03
SSN2YDR443C CTR86P25355 563 aa2.4□□□□□ -2.03
SSN2YDR443C ITR2P30606 609 aa2.4□□□□□ -2.03
SSN2YDR443C MSN2P33748 704 aa2.4□□□□□ -2.03
SSN2YDR443C AIM3P38266 947 aaKnown RBP2.4□□□□□ -2.03
SSN2YDR443C ARP1P38696 384 aa2.4□□□□□ -2.03
SSN2YDR443C ALG8P40351 577 aa2.4□□□□□ -2.03
SSN2YDR443C RSM25P40496 264 aa2.4□□□□□ -2.03
SSN2YDR443C GND2P53319 492 aa2.4□□□□□ -2.03
SSN2YDR443C SEC13Q04491 297 aaKnown RBP2.4□□□□□ -2.03
SSN2YDR443C MLH3Q12083 715 aa2.4□□□□□ -2.03
SSN2YDR443C USV1Q12132 391 aa2.4□□□□□ -2.03
SSN2YDR443C NPC2Q12408 173 aa2.4□□□□□ -2.03
SSN2YDR443C TRA1P38811 3744 aa2.4□□□□□ -2.03
SSN2YDR443C PAB1P04147 577 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
SSN2YDR443C CPT1P17898 393 aa2.4□□□□□ -2.03
SSN2YDR443C APE2P32454 952 aaKnown RBP2.4□□□□□ -2.03
SSN2YDR443C ATO2P32907 282 aa2.4□□□□□ -2.03
SSN2YDR443C THI80P35202 319 aa2.4□□□□□ -2.03
SSN2YDR443C VPS21P36017 210 aaKnown RBP2.4□□□□□ -2.03
SSN2YDR443C ROT2P38138 954 aa2.4□□□□□ -2.03
SSN2YDR443C MMF1P40185 145 aaKnown RBP2.4□□□□□ -2.03
SSN2YDR443C TOS2P50078 622 aa2.4□□□□□ -2.03
SSN2YDR443C RVB1Q03940 463 aaKnown RBP2.4□□□□□ -2.03
SSN2YDR443C PLM2Q04383 521 aa2.4□□□□□ -2.03
SSN2YDR443C YLR346CQ06139 101 aa2.4□□□□□ -2.03
SSN2YDR443C DXO1Q06349 442 aa2.4□□□□□ -2.03
SSN2YDR443C TY1A-BLQ12266 440 aa2.4□□□□□ -2.03
SSN2YDR443C CTP1P38152 299 aa2.39□□□□□ -2.03
SSN2YDR443C DER1P38307 211 aa2.39□□□□□ -2.03
SSN2YDR443C CYC2P38909 366 aa2.39□□□□□ -2.03
SSN2YDR443C UBP8P50102 471 aa2.39□□□□□ -2.03
SSN2YDR443C NBP35P52920 328 aa2.39□□□□□ -2.03
SSN2YDR443C SHY1P53266 389 aa2.39□□□□□ -2.03
SSN2YDR443C VPS62P53285 467 aa2.39□□□□□ -2.03
SSN2YDR443C KIN4Q01919 800 aa2.39□□□□□ -2.03
SSN2YDR443C RNT1Q02555 471 aa2.39□□□□□ -2.03
SSN2YDR443C UBX2Q04228 584 aa2.39□□□□□ -2.03
SSN2YDR443C ASR1Q06834 288 aa2.39□□□□□ -2.03
SSN2YDR443C YOL019WQ08157 551 aa2.39□□□□□ -2.03
SSN2YDR443C RPN8Q08723 338 aaKnown RBP2.39□□□□□ -2.03
SSN2YDR443C YPL150WQ12152 901 aa2.39□□□□□ -2.03
SSN2YDR443C YLL056CQ12177 298 aa2.39□□□□□ -2.03
SSN2YDR443C TPT1Q12272 230 aaKnown RBP2.39□□□□□ -2.03
SSN2YDR443C AI3P03877 415 aa2.39□□□□□ -2.03
SSN2YDR443C RAD52P06778 471 aaKnown RBP2.39□□□□□ -2.03
SSN2YDR443C EHD3P28817 500 aa2.39□□□□□ -2.03
SSN2YDR443C MRPS5P33759 307 aa2.39□□□□□ -2.03
SSN2YDR443C MTR2P34232 184 aaKnown RBP2.39□□□□□ -2.03
SSN2YDR443C LAS21P40367 830 aa2.39□□□□□ -2.03
SSN2YDR443C URM1P40554 99 aaPredicted RBP2.39□□□□□ -2.03
SSN2YDR443C TRS85P46944 698 aa2.39□□□□□ -2.03
SSN2YDR443C MUP1P50276 574 aa2.39□□□□□ -2.03
SSN2YDR443C SMM1P53720 384 aaKnown RBP2.39□□□□□ -2.03
SSN2YDR443C RFU1Q08003 200 aa2.39□□□□□ -2.03
SSN2YDR443C IRC13Q08630 104 aa2.39□□□□□ -2.03
SSN2YDR443C NOT5Q12514 560 aaPredicted RBP2.39□□□□□ -2.03
SSN2YDR443C RPL20AP0CX23 172 aaKnown RBP2.39□□□□□ -2.03
SSN2YDR443C RPL20BP0CX24 172 aaPredicted RBP2.39□□□□□ -2.03
SSN2YDR443C CDC13P32797 924 aaKnown RBP2.39□□□□□ -2.03
SSN2YDR443C COX15P40086 486 aa2.39□□□□□ -2.03
SSN2YDR443C COX16P47081 118 aa2.39□□□□□ -2.03
SSN2YDR443C PCP1P53259 346 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms