Protein–RNA interactions for Protein: Q06688

BER1, SRR1-like protein BER1, yeastyeast

Known RBP Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BER1Q06688 NSR1YGR159C 1245 nt16.75■□□□□ 0.27
BER1Q06688 YML009W-BYML009W-B 477 nt16.31■□□□□ 0.2
BER1Q06688 NOP1YDL014W 984 nt15.77■□□□□ 0.12
BER1Q06688 MDJ1YFL016C 1536 nt15.4■□□□□ 0.06
BER1Q06688 YJL027CYJL027C 417 nt14.17□□□□□ -0.14
BER1Q06688 YKL036CYKL036C 393 nt14.01□□□□□ -0.17
BER1Q06688 SRX1YKL086W 384 nt13.7□□□□□ -0.22
BER1Q06688 Q0297Q0297 156 nt13.57□□□□□ -0.24
BER1Q06688 DBP2YNL112W 1641 nt13.4□□□□□ -0.26
BER1Q06688 YBR190WYBR190W 312 nt13.31□□□□□ -0.28
BER1Q06688 SSA3YBL075C 1950 nt13.16□□□□□ -0.3
BER1Q06688 RTC3YHR087W 336 nt12.96□□□□□ -0.33
BER1Q06688 YCR051WYCR051W 669 nt12.92□□□□□ -0.34
BER1Q06688 TRN1tP(UGG)A 72 nt12.7□□□□□ -0.38
BER1Q06688 SUF9tP(UGG)F 72 nt12.7□□□□□ -0.38
BER1Q06688 SUF8tP(UGG)H 72 nt12.7□□□□□ -0.38
BER1Q06688 tP(UGG)LtP(UGG)L 72 nt12.7□□□□□ -0.38
BER1Q06688 SUF7tP(UGG)M 72 nt12.7□□□□□ -0.38
BER1Q06688 tP(UGG)N1tP(UGG)N1 72 nt12.7□□□□□ -0.38
BER1Q06688 tP(UGG)N2tP(UGG)N2 72 nt12.7□□□□□ -0.38
BER1Q06688 tP(UGG)O1tP(UGG)O1 72 nt12.7□□□□□ -0.38
BER1Q06688 SUF11tP(UGG)O2 72 nt12.7□□□□□ -0.38
BER1Q06688 CCC1YLR220W 969 nt12.54□□□□□ -0.4
BER1Q06688 PUT4YOR348C 1884 nt12.53□□□□□ -0.4
BER1Q06688 RVS167YDR388W 1449 nt12.48□□□□□ -0.41
BER1Q06688 SCS3YGL126W 1143 nt12.41□□□□□ -0.42
BER1Q06688 SCJ1YMR214W 1134 nt12.28□□□□□ -0.44
BER1Q06688 RPP1BYDL130W 321 nt12.17□□□□□ -0.46
BER1Q06688 ARE1YCR048W 1833 nt12.12□□□□□ -0.47
BER1Q06688 YOL085CYOL085C 342 nt12.1□□□□□ -0.47
BER1Q06688 POA1YBR022W 534 nt12.08□□□□□ -0.48
BER1Q06688 YHR049C-AYHR049C-A 297 nt11.96□□□□□ -0.49
BER1Q06688 SAH1YER043C 1350 nt11.95□□□□□ -0.5
BER1Q06688 BSC6YOL137W 1494 nt11.95□□□□□ -0.5
BER1Q06688 URN1YPR152C 1398 nt11.92□□□□□ -0.5
BER1Q06688 PKP1YIL042C 1185 nt11.91□□□□□ -0.5
BER1Q06688 OPI9YLR338W 858 nt11.89□□□□□ -0.51
BER1Q06688 SHR5YOL110W 714 nt11.89□□□□□ -0.51
BER1Q06688 SPT5YML010W 3192 nt11.84□□□□□ -0.51
BER1Q06688 tP(UGG)O3tP(UGG)O3 72 nt11.82□□□□□ -0.52
BER1Q06688 DEP1YAL013W 1218 nt11.74□□□□□ -0.53
BER1Q06688 SSA4YER103W 1929 nt11.7□□□□□ -0.54
BER1Q06688 RPN10YHR200W 807 nt11.65□□□□□ -0.54
BER1Q06688 BUD23YCR047C 828 nt11.63□□□□□ -0.55
BER1Q06688 PET122YER153C 765 nt11.63□□□□□ -0.55
BER1Q06688 PUN1YLR414C 792 nt11.53□□□□□ -0.56
BER1Q06688 YNL208WYNL208W 600 nt11.5□□□□□ -0.57
BER1Q06688 YDJ1YNL064C 1230 nt11.49□□□□□ -0.57
BER1Q06688 SCR1SCR1 522 nt11.49□□□□□ -0.57
BER1Q06688 PTC2YER089C 1395 nt11.48□□□□□ -0.57
BER1Q06688 NAB2YGL122C 1578 nt11.41□□□□□ -0.58
BER1Q06688 YJR018WYJR018W 363 nt11.35□□□□□ -0.59
BER1Q06688 BDF1YLR399C 2061 nt11.32□□□□□ -0.6
BER1Q06688 MEP2YNL142W 1500 nt11.28□□□□□ -0.6
BER1Q06688 GAR1YHR089C 618 nt11.26□□□□□ -0.61
BER1Q06688 RRN5YLR141W 1092 nt11.24□□□□□ -0.61
BER1Q06688 FIS1YIL065C 468 nt11.2□□□□□ -0.62
BER1Q06688 YJL225CYJL225C 5277 nt11.2□□□□□ -0.62
BER1Q06688 DAL1YIR027C 1383 nt11.16□□□□□ -0.62
BER1Q06688 TAT1YBR069C 1860 nt11.15□□□□□ -0.62
BER1Q06688 FPR4YLR449W 1179 nt11.09□□□□□ -0.63
BER1Q06688 DCW1YKL046C 1350 nt11.08□□□□□ -0.64
BER1Q06688 YJR120WYJR120W 351 nt11.06□□□□□ -0.64
BER1Q06688 PHO4YFR034C 939 nt11.05□□□□□ -0.64
BER1Q06688 YPS1YLR120C 1710 nt11.05□□□□□ -0.64
BER1Q06688 INM2YDR287W 879 nt11.02□□□□□ -0.65
BER1Q06688 YER088W-BYER088W-B 147 nt11.02□□□□□ -0.65
BER1Q06688 Q0182Q0182 405 nt11.02□□□□□ -0.65
BER1Q06688 RDN37-1RDN37-1 5354 nt11.01□□□□□ -0.65
BER1Q06688 RDN37-2RDN37-2 5354 nt11.01□□□□□ -0.65
BER1Q06688 RPP2BYDR382W 333 nt10.98□□□□□ -0.65
BER1Q06688 ATS1YAL020C 1002 nt10.98□□□□□ -0.65
BER1Q06688 YHR165W-AYHR165W-A 312 nt10.95□□□□□ -0.66
BER1Q06688 YBR220CYBR220C 1683 nt10.93□□□□□ -0.66
BER1Q06688 TIR1YER011W 765 nt10.92□□□□□ -0.66
BER1Q06688 EMI2YDR516C 1503 nt10.92□□□□□ -0.66
BER1Q06688 SSA1YAL005C 1929 nt10.92□□□□□ -0.66
BER1Q06688 YMR090WYMR090W 684 nt10.9□□□□□ -0.66
BER1Q06688 NVJ2YPR091C 2313 nt10.89□□□□□ -0.67
BER1Q06688 YDR095CYDR095C 411 nt10.89□□□□□ -0.67
BER1Q06688 RSB1YOR049C 1065 nt10.89□□□□□ -0.67
BER1Q06688 PAC11YDR488C 1602 nt10.88□□□□□ -0.67
BER1Q06688 YBL100CYBL100C 315 nt10.81□□□□□ -0.68
BER1Q06688 YDL221WYDL221W 552 nt10.8□□□□□ -0.68
BER1Q06688 SDH1YKL148C 1923 nt10.78□□□□□ -0.68
BER1Q06688 FPS1YLL043W 2010 nt10.74□□□□□ -0.69
BER1Q06688 CAC2YML102W 1407 nt10.73□□□□□ -0.69
BER1Q06688 PTP1YDL230W 1008 nt10.72□□□□□ -0.69
BER1Q06688 RPP2AYOL039W 321 nt10.68□□□□□ -0.7
BER1Q06688 FUN26YAL022C 1554 nt10.67□□□□□ -0.7
BER1Q06688 PCH2YBR186W 1695 nt10.66□□□□□ -0.7
BER1Q06688 SEC11YIR022W 504 nt10.63□□□□□ -0.71
BER1Q06688 BDH2YAL061W 1254 nt10.63□□□□□ -0.71
BER1Q06688 ALF1YNL148C 765 nt10.63□□□□□ -0.71
BER1Q06688 GUT2YIL155C 1950 nt10.63□□□□□ -0.71
BER1Q06688 SRB2YHR041C 633 nt10.62□□□□□ -0.71
BER1Q06688 SCC4YER147C 1875 nt10.61□□□□□ -0.71
BER1Q06688 IRC15YPL017C 1500 nt10.58□□□□□ -0.72
BER1Q06688 TRM9YML014W 840 nt10.53□□□□□ -0.72
BER1Q06688 GIS3YLR094C 1509 nt10.51□□□□□ -0.73
Retrieved 100 of 7,029 protein–RNA pairs in 196.8 ms