Protein–RNA interactions for Protein: Q99326

YOR338W, SWIRM domain-containing protein YOR338W, yeastyeast

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YOR338WQ99326 YML009W-BYML009W-B 477 nt20.57■□□□□ 0.88
YOR338WQ99326 NSR1YGR159C 1245 nt20.32■□□□□ 0.84
YOR338WQ99326 NOP1YDL014W 984 nt20.06■□□□□ 0.8
YOR338WQ99326 YKL036CYKL036C 393 nt18.57■□□□□ 0.56
YOR338WQ99326 MDJ1YFL016C 1536 nt17.94■□□□□ 0.46
YOR338WQ99326 Q0297Q0297 156 nt17.52■□□□□ 0.4
YOR338WQ99326 SRX1YKL086W 384 nt17.48■□□□□ 0.39
YOR338WQ99326 YJL027CYJL027C 417 nt17.39■□□□□ 0.37
YOR338WQ99326 SCS3YGL126W 1143 nt16.93■□□□□ 0.3
YOR338WQ99326 YCR051WYCR051W 669 nt16.66■□□□□ 0.26
YOR338WQ99326 YOL085CYOL085C 342 nt16.07■□□□□ 0.16
YOR338WQ99326 DBP2YNL112W 1641 nt15.86■□□□□ 0.13
YOR338WQ99326 PKP1YIL042C 1185 nt15.85■□□□□ 0.13
YOR338WQ99326 RPP1BYDL130W 321 nt15.75■□□□□ 0.11
YOR338WQ99326 TRN1tP(UGG)A 72 nt15.71■□□□□ 0.11
YOR338WQ99326 SUF9tP(UGG)F 72 nt15.71■□□□□ 0.11
YOR338WQ99326 SUF8tP(UGG)H 72 nt15.71■□□□□ 0.11
YOR338WQ99326 tP(UGG)LtP(UGG)L 72 nt15.71■□□□□ 0.11
YOR338WQ99326 SUF7tP(UGG)M 72 nt15.71■□□□□ 0.11
YOR338WQ99326 tP(UGG)N1tP(UGG)N1 72 nt15.71■□□□□ 0.11
YOR338WQ99326 tP(UGG)N2tP(UGG)N2 72 nt15.71■□□□□ 0.11
YOR338WQ99326 tP(UGG)O1tP(UGG)O1 72 nt15.71■□□□□ 0.11
YOR338WQ99326 SUF11tP(UGG)O2 72 nt15.71■□□□□ 0.11
YOR338WQ99326 CCC1YLR220W 969 nt15.66■□□□□ 0.1
YOR338WQ99326 YBR190WYBR190W 312 nt15.27■□□□□ 0.04
YOR338WQ99326 ATS1YAL020C 1002 nt15.18■□□□□ 0.02
YOR338WQ99326 SCJ1YMR214W 1134 nt15.11■□□□□ 0.01
YOR338WQ99326 RVS167YDR388W 1449 nt15.04■□□□□ -0
YOR338WQ99326 PET122YER153C 765 nt15.03■□□□□ -0
YOR338WQ99326 RTC3YHR087W 336 nt15.02■□□□□ -0
YOR338WQ99326 SCR1SCR1 522 nt14.95□□□□□ -0.02
YOR338WQ99326 tP(UGG)O3tP(UGG)O3 72 nt14.93□□□□□ -0.02
YOR338WQ99326 RRN5YLR141W 1092 nt14.62□□□□□ -0.07
YOR338WQ99326 SHR5YOL110W 714 nt14.5□□□□□ -0.09
YOR338WQ99326 YDJ1YNL064C 1230 nt14.43□□□□□ -0.1
YOR338WQ99326 RSB1YOR049C 1065 nt14.39□□□□□ -0.11
YOR338WQ99326 YER088W-BYER088W-B 147 nt14.33□□□□□ -0.12
YOR338WQ99326 GAR1YHR089C 618 nt14.14□□□□□ -0.15
YOR338WQ99326 DEP1YAL013W 1218 nt14.1□□□□□ -0.15
YOR338WQ99326 URN1YPR152C 1398 nt14.05□□□□□ -0.16
YOR338WQ99326 PST2YDR032C 597 nt14.02□□□□□ -0.17
YOR338WQ99326 RPN10YHR200W 807 nt13.89□□□□□ -0.19
YOR338WQ99326 YNL208WYNL208W 600 nt13.87□□□□□ -0.19
YOR338WQ99326 OPI9YLR338W 858 nt13.79□□□□□ -0.2
YOR338WQ99326 PUT4YOR348C 1884 nt13.74□□□□□ -0.21
YOR338WQ99326 SAH1YER043C 1350 nt13.7□□□□□ -0.22
YOR338WQ99326 TIR1YER011W 765 nt13.64□□□□□ -0.23
YOR338WQ99326 YKL097CYKL097C 411 nt13.57□□□□□ -0.24
YOR338WQ99326 ARE1YCR048W 1833 nt13.53□□□□□ -0.24
YOR338WQ99326 SHU1YHL006C 453 nt13.43□□□□□ -0.26
YOR338WQ99326 SSA1YAL005C 1929 nt13.43□□□□□ -0.26
YOR338WQ99326 YJR018WYJR018W 363 nt13.41□□□□□ -0.26
YOR338WQ99326 PUN1YLR414C 792 nt13.41□□□□□ -0.26
YOR338WQ99326 YHR049C-AYHR049C-A 297 nt13.4□□□□□ -0.26
YOR338WQ99326 POA1YBR022W 534 nt13.38□□□□□ -0.27
YOR338WQ99326 PTC2YER089C 1395 nt13.24□□□□□ -0.29
YOR338WQ99326 YAL037C-BYAL037C-B 975 nt13.24□□□□□ -0.29
YOR338WQ99326 RPP2BYDR382W 333 nt13.2□□□□□ -0.3
YOR338WQ99326 SRB2YHR041C 633 nt13.18□□□□□ -0.3
YOR338WQ99326 BUD23YCR047C 828 nt13.15□□□□□ -0.3
YOR338WQ99326 YJR120WYJR120W 351 nt13.13□□□□□ -0.31
YOR338WQ99326 WWM1YFL010C 636 nt13.05□□□□□ -0.32
YOR338WQ99326 NAB2YGL122C 1578 nt13.04□□□□□ -0.32
YOR338WQ99326 BSC6YOL137W 1494 nt13.04□□□□□ -0.32
YOR338WQ99326 YGR021WYGR021W 873 nt13.02□□□□□ -0.33
YOR338WQ99326 YOR139CYOR139C 393 nt12.95□□□□□ -0.34
YOR338WQ99326 HOM6YJR139C 1080 nt12.94□□□□□ -0.34
YOR338WQ99326 FPR4YLR449W 1179 nt12.94□□□□□ -0.34
YOR338WQ99326 SSA3YBL075C 1950 nt12.94□□□□□ -0.34
YOR338WQ99326 INM2YDR287W 879 nt12.92□□□□□ -0.34
YOR338WQ99326 MNP1YGL068W 585 nt12.91□□□□□ -0.34
YOR338WQ99326 BDH2YAL061W 1254 nt12.91□□□□□ -0.34
YOR338WQ99326 NPL3YDR432W 1245 nt12.9□□□□□ -0.34
YOR338WQ99326 DAL1YIR027C 1383 nt12.89□□□□□ -0.35
YOR338WQ99326 YFL021C-AYFL021C-A 855 nt12.84□□□□□ -0.35
YOR338WQ99326 FIS1YIL065C 468 nt12.81□□□□□ -0.36
YOR338WQ99326 YBL100CYBL100C 315 nt12.81□□□□□ -0.36
YOR338WQ99326 RKM5YLR137W 1104 nt12.77□□□□□ -0.37
YOR338WQ99326 LSM3YLR438C-A 270 nt12.76□□□□□ -0.37
YOR338WQ99326 PHO4YFR034C 939 nt12.75□□□□□ -0.37
YOR338WQ99326 YOL037CYOL037C 354 nt12.74□□□□□ -0.37
YOR338WQ99326 TRM9YML014W 840 nt12.69□□□□□ -0.38
YOR338WQ99326 FUN26YAL022C 1554 nt12.66□□□□□ -0.38
YOR338WQ99326 ALF1YNL148C 765 nt12.51□□□□□ -0.41
YOR338WQ99326 CCT6YDR188W 1641 nt12.49□□□□□ -0.41
YOR338WQ99326 tM(CAU)CtM(CAU)C 72 nt12.46□□□□□ -0.41
YOR338WQ99326 IMT4tM(CAU)E 72 nt12.46□□□□□ -0.41
YOR338WQ99326 IMT3tM(CAU)J3 72 nt12.46□□□□□ -0.41
YOR338WQ99326 IMT1tM(CAU)O1 72 nt12.46□□□□□ -0.41
YOR338WQ99326 IMT2tM(CAU)P 72 nt12.46□□□□□ -0.41
YOR338WQ99326 YPS1YLR120C 1710 nt12.45□□□□□ -0.42
YOR338WQ99326 SUF2tP(AGG)C 72 nt12.43□□□□□ -0.42
YOR338WQ99326 SUF10tP(AGG)N 72 nt12.43□□□□□ -0.42
YOR338WQ99326 YLR281CYLR281C 468 nt12.43□□□□□ -0.42
YOR338WQ99326 PUS2YGL063W 1113 nt12.4□□□□□ -0.42
YOR338WQ99326 WHI5YOR083W 888 nt12.4□□□□□ -0.42
YOR338WQ99326 YDR095CYDR095C 411 nt12.38□□□□□ -0.43
YOR338WQ99326 YHR165W-AYHR165W-A 312 nt12.37□□□□□ -0.43
YOR338WQ99326 YLR154C-GYLR154C-G 150 nt12.3□□□□□ -0.44
YOR338WQ99326 SIS1YNL007C 1059 nt12.24□□□□□ -0.45
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms