RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C DRS1P32892 752 aaKnown RBP5.54□□□□□ -1.52
SSN2YDR443C TFA1P36100 482 aa5.14□□□□□ -1.59
SSN2YDR443C BFR2Q06631 534 aaKnown RBP5.09□□□□□ -1.59
SSN2YDR443C RQC2Q12532 1038 aaKnown RBP5.03□□□□□ -1.6
SSN2YDR443C TAF7Q05021 590 aa4.92□□□□□ -1.62
SSN2YDR443C MTC1P47018 478 aaKnown RBP4.75□□□□□ -1.65
SSN2YDR443C DMA1P38823 416 aa4.62□□□□□ -1.67
SSN2YDR443C AVT3P36062 692 aa4.52□□□□□ -1.69
SSN2YDR443C DIP2Q12220 943 aaPredicted RBP4.46□□□□□ -1.7
SSN2YDR443C LEO1P38439 464 aa4.41□□□□□ -1.7
SSN2YDR443C FAP1P53971 965 aa4.28□□□□□ -1.72
SSN2YDR443C PTP3P40048 928 aa4.24□□□□□ -1.73
SSN2YDR443C DMA2P53924 522 aa4.19□□□□□ -1.74
SSN2YDR443C MON2P48563 1636 aaPredicted RBP4.13□□□□□ -1.75
SSN2YDR443C LEU3P08638 886 aa4.09□□□□□ -1.75
SSN2YDR443C IOC4Q04213 475 aa4.09□□□□□ -1.76
SSN2YDR443C ABP1P15891 592 aaKnown RBP4.08□□□□□ -1.76
SSN2YDR443C URN1Q06525 465 aaKnown RBP4.04□□□□□ -1.76
SSN2YDR443C AIM44Q99299 758 aa4.03□□□□□ -1.76
SSN2YDR443C IFH1P39520 1085 aa4.03□□□□□ -1.76
SSN2YDR443C NAP1P25293 417 aaKnown RBP4.02□□□□□ -1.77
SSN2YDR443C RLF2Q12495 606 aa4.01□□□□□ -1.77
SSN2YDR443C PRY3P47033 881 aa3.99□□□□□ -1.77
SSN2YDR443C RSE1Q04693 1361 aaKnown RBP3.99□□□□□ -1.77
SSN2YDR443C SAS10Q12136 610 aaPredicted RBP3.97□□□□□ -1.77
SSN2YDR443C RPN1P38764 993 aaKnown RBP3.96□□□□□ -1.78
SSN2YDR443C SSP1P38871 571 aa3.94□□□□□ -1.78
SSN2YDR443C INO80P53115 1489 aa3.93□□□□□ -1.78
SSN2YDR443C ORC1P54784 914 aaPredicted RBP3.9□□□□□ -1.79
SSN2YDR443C TY1B-DR4Q07793 1604 aa3.89□□□□□ -1.79
SSN2YDR443C YML020WQ03722 664 aa3.88□□□□□ -1.79
SSN2YDR443C YAH1Q12184 172 aaKnown RBP3.88□□□□□ -1.79
SSN2YDR443C TCB3Q03640 1545 aaKnown RBP3.88□□□□□ -1.79
SSN2YDR443C SPB4P25808 606 aaPredicted RBP3.87□□□□□ -1.79
SSN2YDR443C RPL17AP05740 184 aaKnown RBP3.87□□□□□ -1.79
SSN2YDR443C RPL17BP46990 184 aaKnown RBP3.87□□□□□ -1.79
SSN2YDR443C SWR1Q05471 1514 aa3.86□□□□□ -1.79
SSN2YDR443C CKB1P43639 278 aa3.84□□□□□ -1.8
SSN2YDR443C KOG1P38873 1557 aa3.83□□□□□ -1.8
SSN2YDR443C DNA2P38859 1522 aa3.79□□□□□ -1.8
SSN2YDR443C SLX8P40072 274 aa3.79□□□□□ -1.8
SSN2YDR443C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SSN2YDR443C BRL1P38770 471 aa3.77□□□□□ -1.81
SSN2YDR443C NOP7P53261 605 aaKnown RBP3.76□□□□□ -1.81
SSN2YDR443C VPS70P47161 811 aa3.76□□□□□ -1.81
SSN2YDR443C KIN1P13185 1064 aa3.76□□□□□ -1.81
SSN2YDR443C RIM101P33400 625 aa3.76□□□□□ -1.81
SSN2YDR443C SNU71P53207 620 aaKnown RBP3.75□□□□□ -1.81
SSN2YDR443C YLR271WQ06152 274 aa3.75□□□□□ -1.81
SSN2YDR443C NOP8Q08287 484 aaPredicted RBP3.75□□□□□ -1.81
SSN2YDR443C REB1P21538 810 aa3.74□□□□□ -1.81
SSN2YDR443C YRB30P53107 440 aaPredicted RBP3.74□□□□□ -1.81
SSN2YDR443C OXP1P28273 1286 aa3.73□□□□□ -1.81
SSN2YDR443C TOP1P04786 769 aa3.71□□□□□ -1.82
SSN2YDR443C RPG1P38249 964 aaKnown RBP3.71□□□□□ -1.82
SSN2YDR443C MET10P39692 1035 aa3.71□□□□□ -1.82
SSN2YDR443C GLC3P32775 704 aa3.71□□□□□ -1.82
SSN2YDR443C GEF1P37020 779 aa3.71□□□□□ -1.82
SSN2YDR443C SSA1P10591 642 aaKnown RBP3.7□□□□□ -1.82
SSN2YDR443C HGH1P48362 394 aaKnown RBP3.7□□□□□ -1.82
SSN2YDR443C CST9Q06032 482 aa3.7□□□□□ -1.82
SSN2YDR443C ISW2Q08773 1120 aa3.7□□□□□ -1.82
SSN2YDR443C YIL055CP40523 627 aaKnown RBP3.7□□□□□ -1.82
SSN2YDR443C MGA2P40578 1113 aa3.7□□□□□ -1.82
SSN2YDR443C GUA1P38625 525 aaKnown RBP3.69□□□□□ -1.82
SSN2YDR443C SUB2Q07478 446 aaKnown RBP3.68□□□□□ -1.82
SSN2YDR443C MAM3Q12296 706 aa3.68□□□□□ -1.82
SSN2YDR443C SPT21P35209 758 aa3.67□□□□□ -1.82
SSN2YDR443C BRN1P38170 754 aa3.67□□□□□ -1.82
SSN2YDR443C SET1P38827 1080 aaKnown RBP3.67□□□□□ -1.82
SSN2YDR443C THO2P53552 1597 aaKnown RBP3.67□□□□□ -1.82
SSN2YDR443C MRX12P47084 519 aa3.66□□□□□ -1.82
SSN2YDR443C YJR008WP47085 338 aa3.66□□□□□ -1.82
SSN2YDR443C HSL1P34244 1518 aa3.66□□□□□ -1.82
SSN2YDR443C LAM6Q08001 693 aa3.66□□□□□ -1.82
SSN2YDR443C SGS1P35187 1447 aa3.65□□□□□ -1.82
SSN2YDR443C NUG1P40010 520 aaKnown RBP3.65□□□□□ -1.83
SSN2YDR443C RTS3P53289 263 aa3.64□□□□□ -1.83
SSN2YDR443C RRN6P32786 894 aa3.63□□□□□ -1.83
SSN2YDR443C YNR021WP53723 404 aaKnown RBP3.63□□□□□ -1.83
SSN2YDR443C PBS2P08018 668 aa3.63□□□□□ -1.83
SSN2YDR443C TFB3Q03290 321 aa3.63□□□□□ -1.83
SSN2YDR443C ATG36P46983 293 aa3.63□□□□□ -1.83
SSN2YDR443C SPT6P23615 1451 aaKnown RBP3.62□□□□□ -1.83
SSN2YDR443C SLD2P34252 453 aa3.62□□□□□ -1.83
SSN2YDR443C PKC1P24583 1151 aa3.61□□□□□ -1.83
SSN2YDR443C SPC42P36094 363 aa3.61□□□□□ -1.83
SSN2YDR443C PAM1P37304 830 aaKnown RBP3.61□□□□□ -1.83
SSN2YDR443C DSF2P38213 736 aa3.61□□□□□ -1.83
SSN2YDR443C RAM2P29703 316 aa3.61□□□□□ -1.83
SSN2YDR443C DIT2P21595 489 aa3.61□□□□□ -1.83
SSN2YDR443C SWE1P32944 819 aa3.61□□□□□ -1.83
SSN2YDR443C YJL007CP47080 104 aa3.6□□□□□ -1.83
SSN2YDR443C IES2P40154 320 aa3.6□□□□□ -1.83
SSN2YDR443C YTA7P40340 1379 aa3.6□□□□□ -1.83
SSN2YDR443C MDG1P53885 366 aa3.59□□□□□ -1.83
SSN2YDR443C RSM7P47150 247 aa3.59□□□□□ -1.83
SSN2YDR443C ALD4P46367 519 aaKnown RBP3.59□□□□□ -1.84
SSN2YDR443C SUB1P54000 292 aaKnown RBP3.59□□□□□ -1.84
SSN2YDR443C YPR148CQ06523 435 aa3.59□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms