Protein–RNA interactions for Protein: Q08723

RPN8, 26S proteasome regulatory subunit RPN8, yeastyeast

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN8Q08723 YML009W-BYML009W-B 477 nt20.1■□□□□ 0.81
RPN8Q08723 NOP1YDL014W 984 nt19.84■□□□□ 0.77
RPN8Q08723 NSR1YGR159C 1245 nt19.77■□□□□ 0.76
RPN8Q08723 YKL036CYKL036C 393 nt18.55■□□□□ 0.56
RPN8Q08723 Q0297Q0297 156 nt17.4■□□□□ 0.38
RPN8Q08723 YJL027CYJL027C 417 nt17.36■□□□□ 0.37
RPN8Q08723 SRX1YKL086W 384 nt17.26■□□□□ 0.35
RPN8Q08723 MDJ1YFL016C 1536 nt17.04■□□□□ 0.32
RPN8Q08723 SCS3YGL126W 1143 nt16.97■□□□□ 0.31
RPN8Q08723 YCR051WYCR051W 669 nt16.35■□□□□ 0.21
RPN8Q08723 YOL085CYOL085C 342 nt15.99■□□□□ 0.15
RPN8Q08723 SCJ1YMR214W 1134 nt15.66■□□□□ 0.1
RPN8Q08723 RPP1BYDL130W 321 nt15.61■□□□□ 0.09
RPN8Q08723 PKP1YIL042C 1185 nt15.61■□□□□ 0.09
RPN8Q08723 TRN1tP(UGG)A 72 nt15.35■□□□□ 0.05
RPN8Q08723 SUF9tP(UGG)F 72 nt15.35■□□□□ 0.05
RPN8Q08723 SUF8tP(UGG)H 72 nt15.35■□□□□ 0.05
RPN8Q08723 tP(UGG)LtP(UGG)L 72 nt15.35■□□□□ 0.05
RPN8Q08723 SUF7tP(UGG)M 72 nt15.35■□□□□ 0.05
RPN8Q08723 tP(UGG)N1tP(UGG)N1 72 nt15.35■□□□□ 0.05
RPN8Q08723 tP(UGG)N2tP(UGG)N2 72 nt15.35■□□□□ 0.05
RPN8Q08723 tP(UGG)O1tP(UGG)O1 72 nt15.35■□□□□ 0.05
RPN8Q08723 SUF11tP(UGG)O2 72 nt15.35■□□□□ 0.05
RPN8Q08723 ATS1YAL020C 1002 nt15.31■□□□□ 0.04
RPN8Q08723 DBP2YNL112W 1641 nt15.21■□□□□ 0.03
RPN8Q08723 CCC1YLR220W 969 nt15.14■□□□□ 0.01
RPN8Q08723 SSA3YBL075C 1950 nt15.03■□□□□ -0
RPN8Q08723 SCR1SCR1 522 nt14.9□□□□□ -0.02
RPN8Q08723 PET122YER153C 765 nt14.78□□□□□ -0.04
RPN8Q08723 tP(UGG)O3tP(UGG)O3 72 nt14.64□□□□□ -0.07
RPN8Q08723 RVS167YDR388W 1449 nt14.62□□□□□ -0.07
RPN8Q08723 YBR190WYBR190W 312 nt14.58□□□□□ -0.08
RPN8Q08723 RRN5YLR141W 1092 nt14.4□□□□□ -0.1
RPN8Q08723 RSB1YOR049C 1065 nt14.26□□□□□ -0.13
RPN8Q08723 RTC3YHR087W 336 nt14.24□□□□□ -0.13
RPN8Q08723 YDJ1YNL064C 1230 nt14.22□□□□□ -0.13
RPN8Q08723 YER088W-BYER088W-B 147 nt14.13□□□□□ -0.15
RPN8Q08723 SHR5YOL110W 714 nt14.12□□□□□ -0.15
RPN8Q08723 PST2YDR032C 597 nt14.1□□□□□ -0.15
RPN8Q08723 PUT4YOR348C 1884 nt13.89□□□□□ -0.19
RPN8Q08723 YKL097CYKL097C 411 nt13.79□□□□□ -0.2
RPN8Q08723 GAR1YHR089C 618 nt13.76□□□□□ -0.21
RPN8Q08723 RPN10YHR200W 807 nt13.48□□□□□ -0.25
RPN8Q08723 DEP1YAL013W 1218 nt13.45□□□□□ -0.26
RPN8Q08723 URN1YPR152C 1398 nt13.45□□□□□ -0.26
RPN8Q08723 YNL208WYNL208W 600 nt13.44□□□□□ -0.26
RPN8Q08723 SHU1YHL006C 453 nt13.39□□□□□ -0.27
RPN8Q08723 ARE1YCR048W 1833 nt13.39□□□□□ -0.27
RPN8Q08723 SPT5YML010W 3192 nt13.37□□□□□ -0.27
RPN8Q08723 POA1YBR022W 534 nt13.34□□□□□ -0.27
RPN8Q08723 TIR1YER011W 765 nt13.31□□□□□ -0.28
RPN8Q08723 BSC6YOL137W 1494 nt13.22□□□□□ -0.29
RPN8Q08723 SSA4YER103W 1929 nt13.21□□□□□ -0.3
RPN8Q08723 OPI9YLR338W 858 nt13.2□□□□□ -0.3
RPN8Q08723 YHR049C-AYHR049C-A 297 nt13.15□□□□□ -0.3
RPN8Q08723 SAH1YER043C 1350 nt13.08□□□□□ -0.31
RPN8Q08723 YOR139CYOR139C 393 nt13.05□□□□□ -0.32
RPN8Q08723 NPL3YDR432W 1245 nt13.01□□□□□ -0.33
RPN8Q08723 YAL037C-BYAL037C-B 975 nt13.01□□□□□ -0.33
RPN8Q08723 SSA1YAL005C 1929 nt13□□□□□ -0.33
RPN8Q08723 YGR021WYGR021W 873 nt12.94□□□□□ -0.34
RPN8Q08723 PUN1YLR414C 792 nt12.89□□□□□ -0.35
RPN8Q08723 YJR018WYJR018W 363 nt12.87□□□□□ -0.35
RPN8Q08723 BDF1YLR399C 2061 nt12.85□□□□□ -0.35
RPN8Q08723 RPP2BYDR382W 333 nt12.82□□□□□ -0.36
RPN8Q08723 YOL037CYOL037C 354 nt12.81□□□□□ -0.36
RPN8Q08723 HOM6YJR139C 1080 nt12.78□□□□□ -0.36
RPN8Q08723 BUD23YCR047C 828 nt12.74□□□□□ -0.37
RPN8Q08723 WWM1YFL010C 636 nt12.71□□□□□ -0.37
RPN8Q08723 SRB2YHR041C 633 nt12.69□□□□□ -0.38
RPN8Q08723 MNP1YGL068W 585 nt12.68□□□□□ -0.38
RPN8Q08723 TAT1YBR069C 1860 nt12.64□□□□□ -0.39
RPN8Q08723 YFL021C-AYFL021C-A 855 nt12.64□□□□□ -0.39
RPN8Q08723 RKM5YLR137W 1104 nt12.61□□□□□ -0.39
RPN8Q08723 YJR120WYJR120W 351 nt12.58□□□□□ -0.4
RPN8Q08723 PTC2YER089C 1395 nt12.56□□□□□ -0.4
RPN8Q08723 tM(CAU)CtM(CAU)C 72 nt12.55□□□□□ -0.4
RPN8Q08723 IMT4tM(CAU)E 72 nt12.55□□□□□ -0.4
RPN8Q08723 IMT3tM(CAU)J3 72 nt12.55□□□□□ -0.4
RPN8Q08723 IMT1tM(CAU)O1 72 nt12.55□□□□□ -0.4
RPN8Q08723 IMT2tM(CAU)P 72 nt12.55□□□□□ -0.4
RPN8Q08723 BDH2YAL061W 1254 nt12.55□□□□□ -0.4
RPN8Q08723 LSM3YLR438C-A 270 nt12.5□□□□□ -0.41
RPN8Q08723 MEP2YNL142W 1500 nt12.5□□□□□ -0.41
RPN8Q08723 NAB2YGL122C 1578 nt12.47□□□□□ -0.41
RPN8Q08723 PAC11YDR488C 1602 nt12.45□□□□□ -0.42
RPN8Q08723 INM2YDR287W 879 nt12.44□□□□□ -0.42
RPN8Q08723 YLR281CYLR281C 468 nt12.39□□□□□ -0.43
RPN8Q08723 PUS2YGL063W 1113 nt12.36□□□□□ -0.43
RPN8Q08723 DAL1YIR027C 1383 nt12.32□□□□□ -0.44
RPN8Q08723 YBL100CYBL100C 315 nt12.32□□□□□ -0.44
RPN8Q08723 DCW1YKL046C 1350 nt12.31□□□□□ -0.44
RPN8Q08723 FIS1YIL065C 468 nt12.28□□□□□ -0.44
RPN8Q08723 WHI5YOR083W 888 nt12.28□□□□□ -0.44
RPN8Q08723 TRM9YML014W 840 nt12.27□□□□□ -0.45
RPN8Q08723 FPR4YLR449W 1179 nt12.24□□□□□ -0.45
RPN8Q08723 MOT3YMR070W 1473 nt12.22□□□□□ -0.45
RPN8Q08723 IMP2'YIL154C 1041 nt12.2□□□□□ -0.46
RPN8Q08723 YBR220CYBR220C 1683 nt12.19□□□□□ -0.46
RPN8Q08723 NVJ2YPR091C 2313 nt12.19□□□□□ -0.46
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms