Protein–RNA interactions for Protein: P53227

YGR042W, Uncharacterized protein YGR042W, yeastyeast

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YGR042WP53227 NSR1YGR159C 1245 nt17.59■□□□□ 0.41
YGR042WP53227 YML009W-BYML009W-B 477 nt17.29■□□□□ 0.36
YGR042WP53227 NOP1YDL014W 984 nt16.65■□□□□ 0.26
YGR042WP53227 MDJ1YFL016C 1536 nt15.99■□□□□ 0.15
YGR042WP53227 YKL036CYKL036C 393 nt14.99□□□□□ -0.01
YGR042WP53227 YJL027CYJL027C 417 nt14.7□□□□□ -0.06
YGR042WP53227 SRX1YKL086W 384 nt14.58□□□□□ -0.08
YGR042WP53227 Q0297Q0297 156 nt14.5□□□□□ -0.09
YGR042WP53227 DBP2YNL112W 1641 nt14.04□□□□□ -0.16
YGR042WP53227 YBR190WYBR190W 312 nt13.77□□□□□ -0.21
YGR042WP53227 YCR051WYCR051W 669 nt13.74□□□□□ -0.21
YGR042WP53227 SCS3YGL126W 1143 nt13.45□□□□□ -0.26
YGR042WP53227 TRN1tP(UGG)A 72 nt13.45□□□□□ -0.26
YGR042WP53227 SUF9tP(UGG)F 72 nt13.45□□□□□ -0.26
YGR042WP53227 SUF8tP(UGG)H 72 nt13.45□□□□□ -0.26
YGR042WP53227 tP(UGG)LtP(UGG)L 72 nt13.45□□□□□ -0.26
YGR042WP53227 SUF7tP(UGG)M 72 nt13.45□□□□□ -0.26
YGR042WP53227 tP(UGG)N1tP(UGG)N1 72 nt13.45□□□□□ -0.26
YGR042WP53227 tP(UGG)N2tP(UGG)N2 72 nt13.45□□□□□ -0.26
YGR042WP53227 tP(UGG)O1tP(UGG)O1 72 nt13.45□□□□□ -0.26
YGR042WP53227 SUF11tP(UGG)O2 72 nt13.45□□□□□ -0.26
YGR042WP53227 RTC3YHR087W 336 nt13.35□□□□□ -0.27
YGR042WP53227 CCC1YLR220W 969 nt13.22□□□□□ -0.29
YGR042WP53227 YOL085CYOL085C 342 nt13.02□□□□□ -0.33
YGR042WP53227 RVS167YDR388W 1449 nt13.01□□□□□ -0.33
YGR042WP53227 SSA3YBL075C 1950 nt13.01□□□□□ -0.33
YGR042WP53227 RPP1BYDL130W 321 nt12.99□□□□□ -0.33
YGR042WP53227 SCJ1YMR214W 1134 nt12.94□□□□□ -0.34
YGR042WP53227 PUT4YOR348C 1884 nt12.85□□□□□ -0.35
YGR042WP53227 PKP1YIL042C 1185 nt12.83□□□□□ -0.36
YGR042WP53227 tP(UGG)O3tP(UGG)O3 72 nt12.56□□□□□ -0.4
YGR042WP53227 SHR5YOL110W 714 nt12.51□□□□□ -0.41
YGR042WP53227 ARE1YCR048W 1833 nt12.48□□□□□ -0.41
YGR042WP53227 PET122YER153C 765 nt12.46□□□□□ -0.41
YGR042WP53227 URN1YPR152C 1398 nt12.4□□□□□ -0.42
YGR042WP53227 POA1YBR022W 534 nt12.35□□□□□ -0.43
YGR042WP53227 OPI9YLR338W 858 nt12.34□□□□□ -0.43
YGR042WP53227 SAH1YER043C 1350 nt12.33□□□□□ -0.44
YGR042WP53227 YHR049C-AYHR049C-A 297 nt12.28□□□□□ -0.44
YGR042WP53227 DEP1YAL013W 1218 nt12.25□□□□□ -0.45
YGR042WP53227 BSC6YOL137W 1494 nt12.19□□□□□ -0.46
YGR042WP53227 YDJ1YNL064C 1230 nt12.18□□□□□ -0.46
YGR042WP53227 SCR1SCR1 522 nt12.16□□□□□ -0.46
YGR042WP53227 RPN10YHR200W 807 nt12.1□□□□□ -0.47
YGR042WP53227 SPT5YML010W 3192 nt12.04□□□□□ -0.48
YGR042WP53227 RRN5YLR141W 1092 nt12.04□□□□□ -0.48
YGR042WP53227 YNL208WYNL208W 600 nt12.04□□□□□ -0.48
YGR042WP53227 PUN1YLR414C 792 nt11.95□□□□□ -0.5
YGR042WP53227 BUD23YCR047C 828 nt11.92□□□□□ -0.5
YGR042WP53227 GAR1YHR089C 618 nt11.91□□□□□ -0.5
YGR042WP53227 ATS1YAL020C 1002 nt11.91□□□□□ -0.5
YGR042WP53227 PTC2YER089C 1395 nt11.86□□□□□ -0.51
YGR042WP53227 YER088W-BYER088W-B 147 nt11.81□□□□□ -0.52
YGR042WP53227 YJR018WYJR018W 363 nt11.8□□□□□ -0.52
YGR042WP53227 NAB2YGL122C 1578 nt11.78□□□□□ -0.52
YGR042WP53227 SSA4YER103W 1929 nt11.74□□□□□ -0.53
YGR042WP53227 RSB1YOR049C 1065 nt11.63□□□□□ -0.55
YGR042WP53227 FIS1YIL065C 468 nt11.62□□□□□ -0.55
YGR042WP53227 YJR120WYJR120W 351 nt11.62□□□□□ -0.55
YGR042WP53227 TIR1YER011W 765 nt11.56□□□□□ -0.56
YGR042WP53227 DAL1YIR027C 1383 nt11.54□□□□□ -0.56
YGR042WP53227 SSA1YAL005C 1929 nt11.53□□□□□ -0.56
YGR042WP53227 MEP2YNL142W 1500 nt11.5□□□□□ -0.57
YGR042WP53227 PHO4YFR034C 939 nt11.45□□□□□ -0.58
YGR042WP53227 INM2YDR287W 879 nt11.43□□□□□ -0.58
YGR042WP53227 FPR4YLR449W 1179 nt11.43□□□□□ -0.58
YGR042WP53227 RPP2BYDR382W 333 nt11.42□□□□□ -0.58
YGR042WP53227 YPS1YLR120C 1710 nt11.39□□□□□ -0.59
YGR042WP53227 BDF1YLR399C 2061 nt11.36□□□□□ -0.59
YGR042WP53227 DCW1YKL046C 1350 nt11.3□□□□□ -0.6
YGR042WP53227 SRB2YHR041C 633 nt11.3□□□□□ -0.6
YGR042WP53227 FPS1YLL043W 2010 nt11.27□□□□□ -0.61
YGR042WP53227 YDR095CYDR095C 411 nt11.26□□□□□ -0.61
YGR042WP53227 YBL100CYBL100C 315 nt11.25□□□□□ -0.61
YGR042WP53227 YHR165W-AYHR165W-A 312 nt11.23□□□□□ -0.61
YGR042WP53227 TAT1YBR069C 1860 nt11.21□□□□□ -0.62
YGR042WP53227 NVJ2YPR091C 2313 nt11.2□□□□□ -0.62
YGR042WP53227 PAC11YDR488C 1602 nt11.18□□□□□ -0.62
YGR042WP53227 BDH2YAL061W 1254 nt11.17□□□□□ -0.62
YGR042WP53227 EMI2YDR516C 1503 nt11.14□□□□□ -0.63
YGR042WP53227 PST2YDR032C 597 nt11.12□□□□□ -0.63
YGR042WP53227 FUN26YAL022C 1554 nt11.11□□□□□ -0.63
YGR042WP53227 YBR220CYBR220C 1683 nt11.11□□□□□ -0.63
YGR042WP53227 PTP1YDL230W 1008 nt11.08□□□□□ -0.64
YGR042WP53227 YMR090WYMR090W 684 nt11.05□□□□□ -0.64
YGR042WP53227 YDL221WYDL221W 552 nt11.04□□□□□ -0.64
YGR042WP53227 CAC2YML102W 1407 nt11.03□□□□□ -0.64
YGR042WP53227 RPP2AYOL039W 321 nt11.02□□□□□ -0.65
YGR042WP53227 TRM9YML014W 840 nt10.99□□□□□ -0.65
YGR042WP53227 ALF1YNL148C 765 nt10.99□□□□□ -0.65
YGR042WP53227 SDH1YKL148C 1923 nt10.98□□□□□ -0.65
YGR042WP53227 WWM1YFL010C 636 nt10.98□□□□□ -0.65
YGR042WP53227 CCT6YDR188W 1641 nt10.96□□□□□ -0.65
YGR042WP53227 LSM3YLR438C-A 270 nt10.95□□□□□ -0.66
YGR042WP53227 SIS1YNL007C 1059 nt10.92□□□□□ -0.66
YGR042WP53227 IRC15YPL017C 1500 nt10.89□□□□□ -0.67
YGR042WP53227 SUF2tP(AGG)C 72 nt10.85□□□□□ -0.67
YGR042WP53227 SUF10tP(AGG)N 72 nt10.85□□□□□ -0.67
YGR042WP53227 SCC4YER147C 1875 nt10.84□□□□□ -0.67
YGR042WP53227 YJL225CYJL225C 5277 nt10.82□□□□□ -0.68
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms