Protein–RNA interactions for Protein: P53259

PCP1, Rhomboid protein 1, mitochondrial, yeastyeast

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PCP1P53259 YML009W-BYML009W-B 477 nt18.03■□□□□ 0.48
PCP1P53259 NSR1YGR159C 1245 nt17.86■□□□□ 0.45
PCP1P53259 NOP1YDL014W 984 nt17.49■□□□□ 0.39
PCP1P53259 YKL036CYKL036C 393 nt16.21■□□□□ 0.19
PCP1P53259 MDJ1YFL016C 1536 nt15.96■□□□□ 0.15
PCP1P53259 Q0297Q0297 156 nt15.32■□□□□ 0.04
PCP1P53259 SRX1YKL086W 384 nt15.27■□□□□ 0.04
PCP1P53259 YJL027CYJL027C 417 nt15.14■□□□□ 0.01
PCP1P53259 SCS3YGL126W 1143 nt14.78□□□□□ -0.04
PCP1P53259 YCR051WYCR051W 669 nt14.52□□□□□ -0.09
PCP1P53259 DBP2YNL112W 1641 nt14.04□□□□□ -0.16
PCP1P53259 YOL085CYOL085C 342 nt14.04□□□□□ -0.16
PCP1P53259 TRN1tP(UGG)A 72 nt13.81□□□□□ -0.2
PCP1P53259 SUF9tP(UGG)F 72 nt13.81□□□□□ -0.2
PCP1P53259 SUF8tP(UGG)H 72 nt13.81□□□□□ -0.2
PCP1P53259 tP(UGG)LtP(UGG)L 72 nt13.81□□□□□ -0.2
PCP1P53259 SUF7tP(UGG)M 72 nt13.81□□□□□ -0.2
PCP1P53259 tP(UGG)N1tP(UGG)N1 72 nt13.81□□□□□ -0.2
PCP1P53259 tP(UGG)N2tP(UGG)N2 72 nt13.81□□□□□ -0.2
PCP1P53259 tP(UGG)O1tP(UGG)O1 72 nt13.81□□□□□ -0.2
PCP1P53259 SUF11tP(UGG)O2 72 nt13.81□□□□□ -0.2
PCP1P53259 PKP1YIL042C 1185 nt13.81□□□□□ -0.2
PCP1P53259 RPP1BYDL130W 321 nt13.75□□□□□ -0.21
PCP1P53259 CCC1YLR220W 969 nt13.73□□□□□ -0.21
PCP1P53259 YBR190WYBR190W 312 nt13.56□□□□□ -0.24
PCP1P53259 RTC3YHR087W 336 nt13.33□□□□□ -0.28
PCP1P53259 ATS1YAL020C 1002 nt13.25□□□□□ -0.29
PCP1P53259 RVS167YDR388W 1449 nt13.23□□□□□ -0.29
PCP1P53259 SCJ1YMR214W 1134 nt13.21□□□□□ -0.29
PCP1P53259 PET122YER153C 765 nt13.12□□□□□ -0.31
PCP1P53259 tP(UGG)O3tP(UGG)O3 72 nt13.07□□□□□ -0.32
PCP1P53259 SCR1SCR1 522 nt13.02□□□□□ -0.33
PCP1P53259 RRN5YLR141W 1092 nt12.76□□□□□ -0.37
PCP1P53259 SHR5YOL110W 714 nt12.75□□□□□ -0.37
PCP1P53259 YDJ1YNL064C 1230 nt12.62□□□□□ -0.39
PCP1P53259 RSB1YOR049C 1065 nt12.52□□□□□ -0.41
PCP1P53259 YER088W-BYER088W-B 147 nt12.51□□□□□ -0.41
PCP1P53259 DEP1YAL013W 1218 nt12.47□□□□□ -0.41
PCP1P53259 URN1YPR152C 1398 nt12.44□□□□□ -0.42
PCP1P53259 GAR1YHR089C 618 nt12.4□□□□□ -0.42
PCP1P53259 PUT4YOR348C 1884 nt12.31□□□□□ -0.44
PCP1P53259 PST2YDR032C 597 nt12.26□□□□□ -0.45
PCP1P53259 RPN10YHR200W 807 nt12.24□□□□□ -0.45
PCP1P53259 OPI9YLR338W 858 nt12.24□□□□□ -0.45
PCP1P53259 YNL208WYNL208W 600 nt12.21□□□□□ -0.45
PCP1P53259 SAH1YER043C 1350 nt12.19□□□□□ -0.46
PCP1P53259 ARE1YCR048W 1833 nt12.1□□□□□ -0.47
PCP1P53259 YHR049C-AYHR049C-A 297 nt12□□□□□ -0.49
PCP1P53259 POA1YBR022W 534 nt11.99□□□□□ -0.49
PCP1P53259 TIR1YER011W 765 nt11.96□□□□□ -0.49
PCP1P53259 PUN1YLR414C 792 nt11.89□□□□□ -0.51
PCP1P53259 YJR018WYJR018W 363 nt11.86□□□□□ -0.51
PCP1P53259 YKL097CYKL097C 411 nt11.82□□□□□ -0.52
PCP1P53259 SSA1YAL005C 1929 nt11.8□□□□□ -0.52
PCP1P53259 PTC2YER089C 1395 nt11.77□□□□□ -0.53
PCP1P53259 BUD23YCR047C 828 nt11.75□□□□□ -0.53
PCP1P53259 SHU1YHL006C 453 nt11.74□□□□□ -0.53
PCP1P53259 BSC6YOL137W 1494 nt11.72□□□□□ -0.53
PCP1P53259 YJR120WYJR120W 351 nt11.65□□□□□ -0.54
PCP1P53259 RPP2BYDR382W 333 nt11.62□□□□□ -0.55
PCP1P53259 SRB2YHR041C 633 nt11.62□□□□□ -0.55
PCP1P53259 NAB2YGL122C 1578 nt11.58□□□□□ -0.55
PCP1P53259 YAL037C-BYAL037C-B 975 nt11.52□□□□□ -0.57
PCP1P53259 FPR4YLR449W 1179 nt11.48□□□□□ -0.57
PCP1P53259 SSA3YBL075C 1950 nt11.48□□□□□ -0.57
PCP1P53259 DAL1YIR027C 1383 nt11.44□□□□□ -0.58
PCP1P53259 WWM1YFL010C 636 nt11.44□□□□□ -0.58
PCP1P53259 FIS1YIL065C 468 nt11.43□□□□□ -0.58
PCP1P53259 INM2YDR287W 879 nt11.41□□□□□ -0.58
PCP1P53259 YGR021WYGR021W 873 nt11.36□□□□□ -0.59
PCP1P53259 BDH2YAL061W 1254 nt11.36□□□□□ -0.59
PCP1P53259 PHO4YFR034C 939 nt11.35□□□□□ -0.59
PCP1P53259 YBL100CYBL100C 315 nt11.34□□□□□ -0.59
PCP1P53259 YOR139CYOR139C 393 nt11.33□□□□□ -0.6
PCP1P53259 HOM6YJR139C 1080 nt11.32□□□□□ -0.6
PCP1P53259 MNP1YGL068W 585 nt11.29□□□□□ -0.6
PCP1P53259 YFL021C-AYFL021C-A 855 nt11.23□□□□□ -0.61
PCP1P53259 NPL3YDR432W 1245 nt11.21□□□□□ -0.61
PCP1P53259 FUN26YAL022C 1554 nt11.19□□□□□ -0.62
PCP1P53259 LSM3YLR438C-A 270 nt11.18□□□□□ -0.62
PCP1P53259 RKM5YLR137W 1104 nt11.16□□□□□ -0.62
PCP1P53259 TRM9YML014W 840 nt11.16□□□□□ -0.62
PCP1P53259 YOL037CYOL037C 354 nt11.14□□□□□ -0.63
PCP1P53259 YPS1YLR120C 1710 nt11.1□□□□□ -0.63
PCP1P53259 ALF1YNL148C 765 nt11.06□□□□□ -0.64
PCP1P53259 YDR095CYDR095C 411 nt11.04□□□□□ -0.64
PCP1P53259 YHR165W-AYHR165W-A 312 nt11.04□□□□□ -0.64
PCP1P53259 SPT5YML010W 3192 nt11.03□□□□□ -0.64
PCP1P53259 CCT6YDR188W 1641 nt11.02□□□□□ -0.65
PCP1P53259 Q0182Q0182 405 nt11.01□□□□□ -0.65
PCP1P53259 MEP2YNL142W 1500 nt10.98□□□□□ -0.65
PCP1P53259 SUF2tP(AGG)C 72 nt10.95□□□□□ -0.66
PCP1P53259 SUF10tP(AGG)N 72 nt10.95□□□□□ -0.66
PCP1P53259 tM(CAU)CtM(CAU)C 72 nt10.89□□□□□ -0.67
PCP1P53259 IMT4tM(CAU)E 72 nt10.89□□□□□ -0.67
PCP1P53259 IMT3tM(CAU)J3 72 nt10.89□□□□□ -0.67
PCP1P53259 IMT1tM(CAU)O1 72 nt10.89□□□□□ -0.67
PCP1P53259 IMT2tM(CAU)P 72 nt10.89□□□□□ -0.67
PCP1P53259 YLR281CYLR281C 468 nt10.87□□□□□ -0.67
PCP1P53259 RPP2AYOL039W 321 nt10.85□□□□□ -0.67
Retrieved 100 of 7,029 protein–RNA pairs in 53.3 ms