Protein–RNA interactions for Protein: P38307

DER1, Degradation in the endoplasmic reticulum protein 1, yeastyeast

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DER1P38307 NSR1YGR159C 1245 nt16.27■□□□□ 0.2
DER1P38307 YML009W-BYML009W-B 477 nt15.98■□□□□ 0.15
DER1P38307 NOP1YDL014W 984 nt15.4■□□□□ 0.06
DER1P38307 MDJ1YFL016C 1536 nt14.78□□□□□ -0.04
DER1P38307 YKL036CYKL036C 393 nt13.82□□□□□ -0.2
DER1P38307 YJL027CYJL027C 417 nt13.62□□□□□ -0.23
DER1P38307 SRX1YKL086W 384 nt13.45□□□□□ -0.26
DER1P38307 Q0297Q0297 156 nt13.35□□□□□ -0.27
DER1P38307 DBP2YNL112W 1641 nt12.94□□□□□ -0.34
DER1P38307 YBR190WYBR190W 312 nt12.75□□□□□ -0.37
DER1P38307 YCR051WYCR051W 669 nt12.69□□□□□ -0.38
DER1P38307 TRN1tP(UGG)A 72 nt12.41□□□□□ -0.42
DER1P38307 SUF9tP(UGG)F 72 nt12.41□□□□□ -0.42
DER1P38307 SUF8tP(UGG)H 72 nt12.41□□□□□ -0.42
DER1P38307 tP(UGG)LtP(UGG)L 72 nt12.41□□□□□ -0.42
DER1P38307 SUF7tP(UGG)M 72 nt12.41□□□□□ -0.42
DER1P38307 tP(UGG)N1tP(UGG)N1 72 nt12.41□□□□□ -0.42
DER1P38307 tP(UGG)N2tP(UGG)N2 72 nt12.41□□□□□ -0.42
DER1P38307 tP(UGG)O1tP(UGG)O1 72 nt12.41□□□□□ -0.42
DER1P38307 SUF11tP(UGG)O2 72 nt12.41□□□□□ -0.42
DER1P38307 RTC3YHR087W 336 nt12.4□□□□□ -0.42
DER1P38307 SCS3YGL126W 1143 nt12.35□□□□□ -0.43
DER1P38307 CCC1YLR220W 969 nt12.22□□□□□ -0.45
DER1P38307 SSA3YBL075C 1950 nt12.09□□□□□ -0.47
DER1P38307 RVS167YDR388W 1449 nt12.09□□□□□ -0.47
DER1P38307 YOL085CYOL085C 342 nt11.97□□□□□ -0.49
DER1P38307 RPP1BYDL130W 321 nt11.96□□□□□ -0.49
DER1P38307 SCJ1YMR214W 1134 nt11.92□□□□□ -0.5
DER1P38307 PUT4YOR348C 1884 nt11.89□□□□□ -0.51
DER1P38307 PKP1YIL042C 1185 nt11.8□□□□□ -0.52
DER1P38307 tP(UGG)O3tP(UGG)O3 72 nt11.59□□□□□ -0.55
DER1P38307 SHR5YOL110W 714 nt11.58□□□□□ -0.56
DER1P38307 ARE1YCR048W 1833 nt11.55□□□□□ -0.56
DER1P38307 URN1YPR152C 1398 nt11.48□□□□□ -0.57
DER1P38307 PET122YER153C 765 nt11.47□□□□□ -0.57
DER1P38307 POA1YBR022W 534 nt11.45□□□□□ -0.58
DER1P38307 SAH1YER043C 1350 nt11.42□□□□□ -0.58
DER1P38307 OPI9YLR338W 858 nt11.41□□□□□ -0.58
DER1P38307 YHR049C-AYHR049C-A 297 nt11.38□□□□□ -0.59
DER1P38307 DEP1YAL013W 1218 nt11.31□□□□□ -0.6
DER1P38307 BSC6YOL137W 1494 nt11.3□□□□□ -0.6
DER1P38307 SCR1SCR1 522 nt11.25□□□□□ -0.61
DER1P38307 RPN10YHR200W 807 nt11.24□□□□□ -0.61
DER1P38307 YDJ1YNL064C 1230 nt11.24□□□□□ -0.61
DER1P38307 YNL208WYNL208W 600 nt11.16□□□□□ -0.62
DER1P38307 SPT5YML010W 3192 nt11.12□□□□□ -0.63
DER1P38307 PUN1YLR414C 792 nt11.09□□□□□ -0.63
DER1P38307 RRN5YLR141W 1092 nt11.08□□□□□ -0.64
DER1P38307 BUD23YCR047C 828 nt11.06□□□□□ -0.64
DER1P38307 GAR1YHR089C 618 nt11□□□□□ -0.65
DER1P38307 PTC2YER089C 1395 nt10.99□□□□□ -0.65
DER1P38307 ATS1YAL020C 1002 nt10.93□□□□□ -0.66
DER1P38307 YJR018WYJR018W 363 nt10.93□□□□□ -0.66
DER1P38307 NAB2YGL122C 1578 nt10.93□□□□□ -0.66
DER1P38307 SSA4YER103W 1929 nt10.89□□□□□ -0.67
DER1P38307 YER088W-BYER088W-B 147 nt10.87□□□□□ -0.67
DER1P38307 SSA1YAL005C 1929 nt10.84□□□□□ -0.67
DER1P38307 FIS1YIL065C 468 nt10.74□□□□□ -0.69
DER1P38307 RSB1YOR049C 1065 nt10.73□□□□□ -0.69
DER1P38307 DAL1YIR027C 1383 nt10.71□□□□□ -0.69
DER1P38307 TIR1YER011W 765 nt10.68□□□□□ -0.7
DER1P38307 YJR120WYJR120W 351 nt10.68□□□□□ -0.7
DER1P38307 MEP2YNL142W 1500 nt10.66□□□□□ -0.7
DER1P38307 FPS1YLL043W 2010 nt10.65□□□□□ -0.7
DER1P38307 FPR4YLR449W 1179 nt10.62□□□□□ -0.71
DER1P38307 INM2YDR287W 879 nt10.61□□□□□ -0.71
DER1P38307 RPP2BYDR382W 333 nt10.61□□□□□ -0.71
DER1P38307 PHO4YFR034C 939 nt10.6□□□□□ -0.71
DER1P38307 YPS1YLR120C 1710 nt10.55□□□□□ -0.72
DER1P38307 BDF1YLR399C 2061 nt10.53□□□□□ -0.72
DER1P38307 NVJ2YPR091C 2313 nt10.49□□□□□ -0.73
DER1P38307 DCW1YKL046C 1350 nt10.45□□□□□ -0.74
DER1P38307 YHR165W-AYHR165W-A 312 nt10.44□□□□□ -0.74
DER1P38307 YBL100CYBL100C 315 nt10.43□□□□□ -0.74
DER1P38307 YDR095CYDR095C 411 nt10.42□□□□□ -0.74
DER1P38307 TAT1YBR069C 1860 nt10.39□□□□□ -0.75
DER1P38307 PAC11YDR488C 1602 nt10.37□□□□□ -0.75
DER1P38307 SRB2YHR041C 633 nt10.35□□□□□ -0.75
DER1P38307 BDH2YAL061W 1254 nt10.34□□□□□ -0.75
DER1P38307 EMI2YDR516C 1503 nt10.33□□□□□ -0.76
DER1P38307 YMR090WYMR090W 684 nt10.31□□□□□ -0.76
DER1P38307 FUN26YAL022C 1554 nt10.29□□□□□ -0.76
DER1P38307 YBR220CYBR220C 1683 nt10.28□□□□□ -0.76
DER1P38307 YDL221WYDL221W 552 nt10.23□□□□□ -0.77
DER1P38307 ALF1YNL148C 765 nt10.23□□□□□ -0.77
DER1P38307 PTP1YDL230W 1008 nt10.21□□□□□ -0.77
DER1P38307 RPP2AYOL039W 321 nt10.21□□□□□ -0.77
DER1P38307 PST2YDR032C 597 nt10.2□□□□□ -0.78
DER1P38307 TRM9YML014W 840 nt10.19□□□□□ -0.78
DER1P38307 CAC2YML102W 1407 nt10.18□□□□□ -0.78
DER1P38307 SDH1YKL148C 1923 nt10.18□□□□□ -0.78
DER1P38307 LSM3YLR438C-A 270 nt10.14□□□□□ -0.79
DER1P38307 CCT6YDR188W 1641 nt10.14□□□□□ -0.79
DER1P38307 WWM1YFL010C 636 nt10.12□□□□□ -0.79
DER1P38307 Q0182Q0182 405 nt10.11□□□□□ -0.79
DER1P38307 SIS1YNL007C 1059 nt10.1□□□□□ -0.79
DER1P38307 SUF2tP(AGG)C 72 nt10.08□□□□□ -0.8
DER1P38307 SUF10tP(AGG)N 72 nt10.08□□□□□ -0.8
DER1P38307 SCC4YER147C 1875 nt10.06□□□□□ -0.8
DER1P38307 IRC15YPL017C 1500 nt10.05□□□□□ -0.8
Retrieved 100 of 7,029 protein–RNA pairs in 10.2 ms