Protein–RNA interactions for Protein: P53720

SMM1, tRNA-dihydrouridine(20) synthase [NAD(P)+], yeastyeast

Known RBP Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMM1P53720 YML009W-BYML009W-B 477 nt17.15■□□□□ 0.34
SMM1P53720 NSR1YGR159C 1245 nt17.02■□□□□ 0.32
SMM1P53720 NOP1YDL014W 984 nt16.79■□□□□ 0.28
SMM1P53720 YKL036CYKL036C 393 nt15.53■□□□□ 0.08
SMM1P53720 MDJ1YFL016C 1536 nt14.92□□□□□ -0.02
SMM1P53720 Q0297Q0297 156 nt14.68□□□□□ -0.06
SMM1P53720 SRX1YKL086W 384 nt14.63□□□□□ -0.07
SMM1P53720 YJL027CYJL027C 417 nt14.5□□□□□ -0.09
SMM1P53720 SCS3YGL126W 1143 nt14.12□□□□□ -0.15
SMM1P53720 YCR051WYCR051W 669 nt13.87□□□□□ -0.19
SMM1P53720 YOL085CYOL085C 342 nt13.42□□□□□ -0.26
SMM1P53720 DBP2YNL112W 1641 nt13.23□□□□□ -0.29
SMM1P53720 RPP1BYDL130W 321 nt13.17□□□□□ -0.3
SMM1P53720 TRN1tP(UGG)A 72 nt13.15□□□□□ -0.3
SMM1P53720 SUF9tP(UGG)F 72 nt13.15□□□□□ -0.3
SMM1P53720 SUF8tP(UGG)H 72 nt13.15□□□□□ -0.3
SMM1P53720 tP(UGG)LtP(UGG)L 72 nt13.15□□□□□ -0.3
SMM1P53720 SUF7tP(UGG)M 72 nt13.15□□□□□ -0.3
SMM1P53720 tP(UGG)N1tP(UGG)N1 72 nt13.15□□□□□ -0.3
SMM1P53720 tP(UGG)N2tP(UGG)N2 72 nt13.15□□□□□ -0.3
SMM1P53720 tP(UGG)O1tP(UGG)O1 72 nt13.15□□□□□ -0.3
SMM1P53720 SUF11tP(UGG)O2 72 nt13.15□□□□□ -0.3
SMM1P53720 PKP1YIL042C 1185 nt13.15□□□□□ -0.3
SMM1P53720 CCC1YLR220W 969 nt12.99□□□□□ -0.33
SMM1P53720 SSA3YBL075C 1950 nt12.9□□□□□ -0.34
SMM1P53720 YBR190WYBR190W 312 nt12.78□□□□□ -0.36
SMM1P53720 SCJ1YMR214W 1134 nt12.72□□□□□ -0.37
SMM1P53720 ATS1YAL020C 1002 nt12.68□□□□□ -0.38
SMM1P53720 RVS167YDR388W 1449 nt12.59□□□□□ -0.39
SMM1P53720 PET122YER153C 765 nt12.52□□□□□ -0.41
SMM1P53720 SCR1SCR1 522 nt12.51□□□□□ -0.41
SMM1P53720 RTC3YHR087W 336 nt12.5□□□□□ -0.41
SMM1P53720 tP(UGG)O3tP(UGG)O3 72 nt12.47□□□□□ -0.41
SMM1P53720 RRN5YLR141W 1092 nt12.19□□□□□ -0.46
SMM1P53720 SHR5YOL110W 714 nt12.13□□□□□ -0.47
SMM1P53720 YDJ1YNL064C 1230 nt12.1□□□□□ -0.47
SMM1P53720 PUT4YOR348C 1884 nt12.1□□□□□ -0.47
SMM1P53720 RSB1YOR049C 1065 nt11.98□□□□□ -0.49
SMM1P53720 YER088W-BYER088W-B 147 nt11.94□□□□□ -0.5
SMM1P53720 GAR1YHR089C 618 nt11.77□□□□□ -0.53
SMM1P53720 PST2YDR032C 597 nt11.72□□□□□ -0.53
SMM1P53720 URN1YPR152C 1398 nt11.71□□□□□ -0.53
SMM1P53720 DEP1YAL013W 1218 nt11.69□□□□□ -0.54
SMM1P53720 ARE1YCR048W 1833 nt11.69□□□□□ -0.54
SMM1P53720 POA1YBR022W 534 nt11.67□□□□□ -0.54
SMM1P53720 RPN10YHR200W 807 nt11.65□□□□□ -0.54
SMM1P53720 YNL208WYNL208W 600 nt11.59□□□□□ -0.55
SMM1P53720 SPT5YML010W 3192 nt11.55□□□□□ -0.56
SMM1P53720 OPI9YLR338W 858 nt11.54□□□□□ -0.56
SMM1P53720 BSC6YOL137W 1494 nt11.53□□□□□ -0.56
SMM1P53720 YHR049C-AYHR049C-A 297 nt11.52□□□□□ -0.57
SMM1P53720 SAH1YER043C 1350 nt11.48□□□□□ -0.57
SMM1P53720 SSA4YER103W 1929 nt11.41□□□□□ -0.58
SMM1P53720 TIR1YER011W 765 nt11.39□□□□□ -0.59
SMM1P53720 YKL097CYKL097C 411 nt11.33□□□□□ -0.6
SMM1P53720 PUN1YLR414C 792 nt11.25□□□□□ -0.61
SMM1P53720 Q0182Q0182 405 nt11.21□□□□□ -0.61
SMM1P53720 YJR018WYJR018W 363 nt11.2□□□□□ -0.62
SMM1P53720 SHU1YHL006C 453 nt11.19□□□□□ -0.62
SMM1P53720 BUD23YCR047C 828 nt11.18□□□□□ -0.62
SMM1P53720 SSA1YAL005C 1929 nt11.17□□□□□ -0.62
SMM1P53720 BDF1YLR399C 2061 nt11.07□□□□□ -0.64
SMM1P53720 RPP2BYDR382W 333 nt11.05□□□□□ -0.64
SMM1P53720 PTC2YER089C 1395 nt11.03□□□□□ -0.64
SMM1P53720 YAL037C-BYAL037C-B 975 nt10.96□□□□□ -0.65
SMM1P53720 YJR120WYJR120W 351 nt10.95□□□□□ -0.66
SMM1P53720 SRB2YHR041C 633 nt10.93□□□□□ -0.66
SMM1P53720 NAB2YGL122C 1578 nt10.92□□□□□ -0.66
SMM1P53720 YGR021WYGR021W 873 nt10.91□□□□□ -0.66
SMM1P53720 MEP2YNL142W 1500 nt10.89□□□□□ -0.67
SMM1P53720 TAT1YBR069C 1860 nt10.88□□□□□ -0.67
SMM1P53720 WWM1YFL010C 636 nt10.86□□□□□ -0.67
SMM1P53720 INM2YDR287W 879 nt10.83□□□□□ -0.68
SMM1P53720 HOM6YJR139C 1080 nt10.81□□□□□ -0.68
SMM1P53720 BDH2YAL061W 1254 nt10.8□□□□□ -0.68
SMM1P53720 YOR139CYOR139C 393 nt10.79□□□□□ -0.68
SMM1P53720 DAL1YIR027C 1383 nt10.78□□□□□ -0.68
SMM1P53720 NPL3YDR432W 1245 nt10.77□□□□□ -0.69
SMM1P53720 FIS1YIL065C 468 nt10.77□□□□□ -0.69
SMM1P53720 PAC11YDR488C 1602 nt10.76□□□□□ -0.69
SMM1P53720 YFL021C-AYFL021C-A 855 nt10.75□□□□□ -0.69
SMM1P53720 MOT3YMR070W 1473 nt10.74□□□□□ -0.69
SMM1P53720 DCW1YKL046C 1350 nt10.74□□□□□ -0.69
SMM1P53720 FPR4YLR449W 1179 nt10.73□□□□□ -0.69
SMM1P53720 MNP1YGL068W 585 nt10.72□□□□□ -0.69
SMM1P53720 LSM3YLR438C-A 270 nt10.71□□□□□ -0.69
SMM1P53720 YBL100CYBL100C 315 nt10.69□□□□□ -0.7
SMM1P53720 YOL037CYOL037C 354 nt10.69□□□□□ -0.7
SMM1P53720 RKM5YLR137W 1104 nt10.66□□□□□ -0.7
SMM1P53720 PHO4YFR034C 939 nt10.65□□□□□ -0.7
SMM1P53720 YPS1YLR120C 1710 nt10.61□□□□□ -0.71
SMM1P53720 TRM9YML014W 840 nt10.61□□□□□ -0.71
SMM1P53720 YBR220CYBR220C 1683 nt10.6□□□□□ -0.71
SMM1P53720 FUN26YAL022C 1554 nt10.56□□□□□ -0.72
SMM1P53720 EMI2YDR516C 1503 nt10.54□□□□□ -0.72
SMM1P53720 YHR165W-AYHR165W-A 312 nt10.51□□□□□ -0.73
SMM1P53720 CCT6YDR188W 1641 nt10.47□□□□□ -0.73
SMM1P53720 ALF1YNL148C 765 nt10.45□□□□□ -0.74
SMM1P53720 YDR095CYDR095C 411 nt10.44□□□□□ -0.74
SMM1P53720 YMR090WYMR090W 684 nt10.44□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 28.7 ms