RNA–Protein interactions for RNA: YOR127W

RGA1, Transcript of GTPase-activating protein for polarity-establishment protein Cdc42p, yeastyeast

Gene RGA1, Length 3,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGA1YOR127W YRR1Q12172 810 aa2.67□□□□□ -1.98
RGA1YOR127W RIX1P38883 763 aaPredicted RBP2.67□□□□□ -1.98
RGA1YOR127W NAB3P38996 802 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
RGA1YOR127W YLR326WQ06170 240 aaKnown RBP2.67□□□□□ -1.98
RGA1YOR127W DRS2P39524 1355 aa2.67□□□□□ -1.98
RGA1YOR127W ERG12P07277 443 aa2.66□□□□□ -1.98
RGA1YOR127W TOA1P32773 286 aa2.66□□□□□ -1.98
RGA1YOR127W HGH1P48362 394 aaKnown RBP2.66□□□□□ -1.98
RGA1YOR127W SAS4Q04003 481 aa2.66□□□□□ -1.98
RGA1YOR127W DNF3Q12674 1656 aa2.66□□□□□ -1.98
RGA1YOR127W PET111P08468 800 aa2.66□□□□□ -1.98
RGA1YOR127W PAT1P25644 796 aaKnown RBP2.66□□□□□ -1.98
RGA1YOR127W GCR2Q01722 534 aa2.66□□□□□ -1.98
RGA1YOR127W GCD11P32481 527 aaKnown RBP2.66□□□□□ -1.98
RGA1YOR127W SCC2Q04002 1493 aa2.65□□□□□ -1.98
RGA1YOR127W RPT2P40327 437 aaKnown RBP2.65□□□□□ -1.99
RGA1YOR127W CSC1Q06538 782 aa2.65□□□□□ -1.99
RGA1YOR127W TY1B-NL2Q99337 1749 aaKnown RBP2.65□□□□□ -1.99
RGA1YOR127W TRK1P12685 1235 aa2.65□□□□□ -1.99
RGA1YOR127W UBP14P38237 781 aaKnown RBP2.65□□□□□ -1.99
RGA1YOR127W VPS4P52917 437 aa2.65□□□□□ -1.99
RGA1YOR127W TFB4Q12004 338 aa2.65□□□□□ -1.99
RGA1YOR127W PDR1P12383 1068 aa2.64□□□□□ -1.99
RGA1YOR127W CDC11P32458 415 aa2.64□□□□□ -1.99
RGA1YOR127W TY4A-JP47023 414 aa2.64□□□□□ -1.99
RGA1YOR127W PIL1P53252 339 aaKnown RBP2.64□□□□□ -1.99
RGA1YOR127W TUM1Q08686 304 aaKnown RBP2.64□□□□□ -1.99
RGA1YOR127W SNT2P53127 1403 aa2.64□□□□□ -1.99
RGA1YOR127W GEF1P37020 779 aa2.64□□□□□ -1.99
RGA1YOR127W PCS60P38137 543 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99 RIP-Chip
RGA1YOR127W MAK21Q12176 1025 aaKnown RBP2.64□□□□□ -1.99
RGA1YOR127W TY1B-DR3Q99231 1755 aa2.64□□□□□ -1.99
RGA1YOR127W NUP170P38181 1502 aa2.64□□□□□ -1.99
RGA1YOR127W AMS1P22855 1083 aa2.63□□□□□ -1.99
RGA1YOR127W TY1B-JR2P47100 1755 aaKnown RBP2.63□□□□□ -1.99
RGA1YOR127W TY1B-ER2Q03619 1755 aa2.63□□□□□ -1.99
RGA1YOR127W TY1B-MR1Q04214 1755 aa2.63□□□□□ -1.99
RGA1YOR127W TY1B-MR2Q04670 1755 aaKnown RBP2.63□□□□□ -1.99
RGA1YOR127W TY1B-LR1Q12088 1755 aaKnown RBP2.63□□□□□ -1.99
RGA1YOR127W TY1B-NL1Q12112 1755 aa2.63□□□□□ -1.99
RGA1YOR127W TY1B-GR1Q12141 1755 aa2.63□□□□□ -1.99
RGA1YOR127W TY1B-BLQ12490 1755 aa2.63□□□□□ -1.99
RGA1YOR127W QCR6P00127 147 aa2.63□□□□□ -1.99
RGA1YOR127W OSW7P43611 510 aa2.63□□□□□ -1.99
RGA1YOR127W PRT1P06103 763 aaKnown RBP2.63□□□□□ -1.99
RGA1YOR127W GAR1P28007 205 aaKnown RBP2.63□□□□□ -1.99
RGA1YOR127W SLX8P40072 274 aa2.63□□□□□ -1.99
RGA1YOR127W PEA2P40091 420 aa2.63□□□□□ -1.99
RGA1YOR127W PUS1Q12211 544 aaKnown RBP2.63□□□□□ -1.99
RGA1YOR127W BUD3P25558 1636 aa2.62□□□□□ -1.99
RGA1YOR127W BLI1P35727 113 aa2.62□□□□□ -1.99
RGA1YOR127W YGL081WP53156 320 aa2.62□□□□□ -1.99
RGA1YOR127W RAS1P01119 309 aa2.62□□□□□ -1.99
RGA1YOR127W HSC82P15108 705 aaKnown RBP2.62□□□□□ -1.99
RGA1YOR127W NUD1P32336 851 aa2.62□□□□□ -1.99
RGA1YOR127W MEH1Q02205 184 aa2.62□□□□□ -1.99
RGA1YOR127W LAM6Q08001 693 aa2.62□□□□□ -1.99
RGA1YOR127W CHC1P22137 1653 aaKnown RBP2.61□□□□□ -1.99
RGA1YOR127W GDB1Q06625 1536 aa2.61□□□□□ -1.99
RGA1YOR127W MSM1P22438 575 aa2.61□□□□□ -1.99
RGA1YOR127W SPB4P25808 606 aaPredicted RBP2.61□□□□□ -1.99
RGA1YOR127W SLD2P34252 453 aa2.61□□□□□ -1.99
RGA1YOR127W SSF1P38789 453 aaPredicted RBP2.61□□□□□ -1.99
RGA1YOR127W SEC27P41811 889 aaKnown RBP2.61□□□□□ -1.99
RGA1YOR127W ZDS1P50111 915 aaKnown RBP2.61□□□□□ -1.99
RGA1YOR127W TCB1Q12466 1186 aa2.61□□□□□ -1.99
RGA1YOR127W KIN1P13185 1064 aa2.61□□□□□ -1.99
RGA1YOR127W UFD4P33202 1483 aa2.61□□□□□ -1.99
RGA1YOR127W HOS4P40480 1083 aa2.6□□□□□ -1.99
RGA1YOR127W CKB1P43639 278 aa2.6□□□□□ -1.99
RGA1YOR127W PRP43P53131 767 aaKnown RBP2.6□□□□□ -1.99
RGA1YOR127W YPR109WQ06104 294 aa2.6□□□□□ -1.99
RGA1YOR127W XRN1P22147 1528 aaKnown RBP2.6□□□□□ -1.99
RGA1YOR127W PDR12Q02785 1511 aa2.6□□□□□ -1.99
RGA1YOR127W GAL11P19659 1081 aa2.6□□□□□ -1.99
RGA1YOR127W ERP2P39704 215 aa2.6□□□□□ -1.99
RGA1YOR127W ENV11P53246 860 aa2.6□□□□□ -1.99
RGA1YOR127W TPO2P53283 614 aa2.6□□□□□ -1.99
RGA1YOR127W YPR015CQ12531 247 aa2.6□□□□□ -1.99
RGA1YOR127W SAC3P46674 1301 aa2.6□□□□□ -1.99
RGA1YOR127W FRK1Q03002 865 aaPredicted RBP2.6□□□□□ -1.99
RGA1YOR127W YPR148CQ06523 435 aa2.6□□□□□ -1.99
RGA1YOR127W PPH3P32345 308 aa2.59□□□□□ -1.99
RGA1YOR127W MTR4P47047 1073 aaKnown RBP2.59□□□□□ -1.99
RGA1YOR127W RLP24Q07915 199 aaKnown RBP2.59□□□□□ -1.99
RGA1YOR127W YRM1Q12340 786 aa2.59□□□□□ -1.99
RGA1YOR127W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.59□□□□□ -2not detected
RGA1YOR127W ISM1P48526 1002 aa2.59□□□□□ -2
RGA1YOR127W CFT2Q12102 859 aaPredicted RBP2.59□□□□□ -2
RGA1YOR127W TY3B-GQ99315 1547 aa2.59□□□□□ -2
RGA1YOR127W SSA1P10591 642 aaKnown RBP2.58□□□□□ -2
RGA1YOR127W SSA2P10592 639 aaKnown RBP2.58□□□□□ -2
RGA1YOR127W RPA135P22138 1203 aaKnown RBP2.58□□□□□ -2
RGA1YOR127W SEC20P28791 383 aa2.58□□□□□ -2
RGA1YOR127W TFC3P34111 1160 aa2.58□□□□□ -2
RGA1YOR127W MPE1P35728 441 aaKnown RBP2.58□□□□□ -2
RGA1YOR127W IES1P43579 692 aa2.58□□□□□ -2
RGA1YOR127W YNL011CP53980 444 aa2.58□□□□□ -2
RGA1YOR127W ECM16Q04217 1267 aaKnown RBP2.58□□□□□ -2
RGA1YOR127W ITT1Q04638 464 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms