Protein–RNA interactions for Protein: P25558

BUD3, Bud site selection protein 3, yeastyeast

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BUD3P25558 YML009W-BYML009W-B 477 nt30.98■■■□□ 2.55
BUD3P25558 NOP1YDL014W 984 nt30.07■■■□□ 2.4
BUD3P25558 NSR1YGR159C 1245 nt29.68■■■□□ 2.34
BUD3P25558 YKL036CYKL036C 393 nt28.61■■■□□ 2.17
BUD3P25558 YJL027CYJL027C 417 nt26.87■■□□□ 1.89
BUD3P25558 Q0297Q0297 156 nt26.58■■□□□ 1.85
BUD3P25558 SCS3YGL126W 1143 nt26.52■■□□□ 1.84
BUD3P25558 SRX1YKL086W 384 nt26.4■■□□□ 1.82
BUD3P25558 MDJ1YFL016C 1536 nt26.11■■□□□ 1.77
BUD3P25558 YCR051WYCR051W 669 nt25.23■■□□□ 1.63
BUD3P25558 YOL085CYOL085C 342 nt24.61■■□□□ 1.53
BUD3P25558 PKP1YIL042C 1185 nt24.42■■□□□ 1.5
BUD3P25558 SCJ1YMR214W 1134 nt24.17■■□□□ 1.46
BUD3P25558 RPP1BYDL130W 321 nt23.88■■□□□ 1.41
BUD3P25558 ATS1YAL020C 1002 nt23.74■■□□□ 1.39
BUD3P25558 TRN1tP(UGG)A 72 nt23.47■■□□□ 1.35
BUD3P25558 SUF9tP(UGG)F 72 nt23.47■■□□□ 1.35
BUD3P25558 SUF8tP(UGG)H 72 nt23.47■■□□□ 1.35
BUD3P25558 tP(UGG)LtP(UGG)L 72 nt23.47■■□□□ 1.35
BUD3P25558 SUF7tP(UGG)M 72 nt23.47■■□□□ 1.35
BUD3P25558 tP(UGG)N1tP(UGG)N1 72 nt23.47■■□□□ 1.35
BUD3P25558 tP(UGG)N2tP(UGG)N2 72 nt23.47■■□□□ 1.35
BUD3P25558 tP(UGG)O1tP(UGG)O1 72 nt23.47■■□□□ 1.35
BUD3P25558 SUF11tP(UGG)O2 72 nt23.47■■□□□ 1.35
BUD3P25558 DBP2YNL112W 1641 nt23.34■■□□□ 1.33
BUD3P25558 CCC1YLR220W 969 nt23.3■■□□□ 1.32
BUD3P25558 PET122YER153C 765 nt22.89■■□□□ 1.25
BUD3P25558 SCR1SCR1 522 nt22.79■■□□□ 1.24
BUD3P25558 tP(UGG)O3tP(UGG)O3 72 nt22.4■■□□□ 1.18
BUD3P25558 RTC3YHR087W 336 nt22.24■■□□□ 1.15
BUD3P25558 RRN5YLR141W 1092 nt22.16■■□□□ 1.14
BUD3P25558 RSB1YOR049C 1065 nt22.13■■□□□ 1.13
BUD3P25558 RVS167YDR388W 1449 nt22.01■■□□□ 1.11
BUD3P25558 PST2YDR032C 597 nt21.77■■□□□ 1.08
BUD3P25558 YBR190WYBR190W 312 nt21.74■■□□□ 1.07
BUD3P25558 YER088W-BYER088W-B 147 nt21.73■■□□□ 1.07
BUD3P25558 YKL097CYKL097C 411 nt21.56■■□□□ 1.04
BUD3P25558 YDJ1YNL064C 1230 nt21.53■■□□□ 1.04
BUD3P25558 SHR5YOL110W 714 nt21.38■■□□□ 1.01
BUD3P25558 GAR1YHR089C 618 nt21.11■□□□□ 0.97
BUD3P25558 SHU1YHL006C 453 nt20.9■□□□□ 0.94
BUD3P25558 DEP1YAL013W 1218 nt20.71■□□□□ 0.91
BUD3P25558 YOR139CYOR139C 393 nt20.51■□□□□ 0.87
BUD3P25558 YAL037C-BYAL037C-B 975 nt20.46■□□□□ 0.87
BUD3P25558 URN1YPR152C 1398 nt20.41■□□□□ 0.86
BUD3P25558 TIR1YER011W 765 nt20.32■□□□□ 0.84
BUD3P25558 NPL3YDR432W 1245 nt20.26■□□□□ 0.83
BUD3P25558 YNL208WYNL208W 600 nt20.24■□□□□ 0.83
BUD3P25558 RPN10YHR200W 807 nt20.2■□□□□ 0.82
BUD3P25558 SRB2YHR041C 633 nt20.02■□□□□ 0.79
BUD3P25558 MNP1YGL068W 585 nt19.93■□□□□ 0.78
BUD3P25558 SSA1YAL005C 1929 nt19.91■□□□□ 0.78
BUD3P25558 OPI9YLR338W 858 nt19.83■□□□□ 0.76
BUD3P25558 YOL037CYOL037C 354 nt19.73■□□□□ 0.75
BUD3P25558 SAH1YER043C 1350 nt19.7■□□□□ 0.74
BUD3P25558 YGR021WYGR021W 873 nt19.7■□□□□ 0.74
BUD3P25558 HOM6YJR139C 1080 nt19.66■□□□□ 0.74
BUD3P25558 WWM1YFL010C 636 nt19.65■□□□□ 0.74
BUD3P25558 YJR120WYJR120W 351 nt19.6■□□□□ 0.73
BUD3P25558 tM(CAU)CtM(CAU)C 72 nt19.47■□□□□ 0.71
BUD3P25558 IMT4tM(CAU)E 72 nt19.47■□□□□ 0.71
BUD3P25558 IMT3tM(CAU)J3 72 nt19.47■□□□□ 0.71
BUD3P25558 IMT1tM(CAU)O1 72 nt19.47■□□□□ 0.71
BUD3P25558 IMT2tM(CAU)P 72 nt19.47■□□□□ 0.71
BUD3P25558 PUT4YOR348C 1884 nt19.45■□□□□ 0.7
BUD3P25558 YJR018WYJR018W 363 nt19.43■□□□□ 0.7
BUD3P25558 ARE1YCR048W 1833 nt19.38■□□□□ 0.69
BUD3P25558 RKM5YLR137W 1104 nt19.37■□□□□ 0.69
BUD3P25558 RPP2BYDR382W 333 nt19.28■□□□□ 0.68
BUD3P25558 PUN1YLR414C 792 nt19.25■□□□□ 0.67
BUD3P25558 SSA3YBL075C 1950 nt19.24■□□□□ 0.67
BUD3P25558 PUS2YGL063W 1113 nt19.24■□□□□ 0.67
BUD3P25558 YFL021C-AYFL021C-A 855 nt19.23■□□□□ 0.67
BUD3P25558 MOT3YMR070W 1473 nt19.21■□□□□ 0.67
BUD3P25558 YHR049C-AYHR049C-A 297 nt19.21■□□□□ 0.67
BUD3P25558 BSC6YOL137W 1494 nt19.12■□□□□ 0.65
BUD3P25558 YLR281CYLR281C 468 nt19.06■□□□□ 0.64
BUD3P25558 BDH2YAL061W 1254 nt19■□□□□ 0.63
BUD3P25558 WHI5YOR083W 888 nt18.96■□□□□ 0.63
BUD3P25558 PTC2YER089C 1395 nt18.89■□□□□ 0.61
BUD3P25558 POA1YBR022W 534 nt18.88■□□□□ 0.61
BUD3P25558 FMP45YDL222C 930 nt18.86■□□□□ 0.61
BUD3P25558 YLR236CYLR236C 324 nt18.72■□□□□ 0.59
BUD3P25558 BUD23YCR047C 828 nt18.69■□□□□ 0.58
BUD3P25558 DSK2YMR276W 1122 nt18.69■□□□□ 0.58
BUD3P25558 LSM3YLR438C-A 270 nt18.68■□□□□ 0.58
BUD3P25558 YBL100CYBL100C 315 nt18.68■□□□□ 0.58
BUD3P25558 FIS1YIL065C 468 nt18.67■□□□□ 0.58
BUD3P25558 YPR011CYPR011C 981 nt18.63■□□□□ 0.57
BUD3P25558 FPR4YLR449W 1179 nt18.57■□□□□ 0.56
BUD3P25558 YCH1YGR203W 447 nt18.56■□□□□ 0.56
BUD3P25558 MRPL8YJL063C 717 nt18.56■□□□□ 0.56
BUD3P25558 NAB2YGL122C 1578 nt18.52■□□□□ 0.56
BUD3P25558 IMP2'YIL154C 1041 nt18.5■□□□□ 0.55
BUD3P25558 YLR154C-GYLR154C-G 150 nt18.48■□□□□ 0.55
BUD3P25558 INM2YDR287W 879 nt18.46■□□□□ 0.55
BUD3P25558 PHO4YFR034C 939 nt18.45■□□□□ 0.54
BUD3P25558 TRM9YML014W 840 nt18.43■□□□□ 0.54
BUD3P25558 DAL1YIR027C 1383 nt18.42■□□□□ 0.54
BUD3P25558 ADO1YJR105W 1023 nt18.35■□□□□ 0.53
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms