Protein–RNA interactions for Protein: P28007

GAR1, H/ACA ribonucleoprotein complex subunit GAR1, yeastyeast

Known RBP Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GAR1P28007 YML009W-BYML009W-B 477 nt16.93■□□□□ 0.3
GAR1P28007 NSR1YGR159C 1245 nt16.91■□□□□ 0.3
GAR1P28007 NOP1YDL014W 984 nt16.4■□□□□ 0.22
GAR1P28007 MDJ1YFL016C 1536 nt15.17■□□□□ 0.02
GAR1P28007 YKL036CYKL036C 393 nt14.95□□□□□ -0.02
GAR1P28007 SRX1YKL086W 384 nt14.27□□□□□ -0.13
GAR1P28007 Q0297Q0297 156 nt14.23□□□□□ -0.13
GAR1P28007 YJL027CYJL027C 417 nt14.03□□□□□ -0.16
GAR1P28007 YCR051WYCR051W 669 nt13.59□□□□□ -0.23
GAR1P28007 SCS3YGL126W 1143 nt13.49□□□□□ -0.25
GAR1P28007 DBP2YNL112W 1641 nt13.28□□□□□ -0.28
GAR1P28007 YGR139WYGR139W 339 nt13.18□□□□□ -0.3
GAR1P28007 TRN1tP(UGG)A 72 nt12.98□□□□□ -0.33
GAR1P28007 SUF9tP(UGG)F 72 nt12.98□□□□□ -0.33
GAR1P28007 SUF8tP(UGG)H 72 nt12.98□□□□□ -0.33
GAR1P28007 tP(UGG)LtP(UGG)L 72 nt12.98□□□□□ -0.33
GAR1P28007 SUF7tP(UGG)M 72 nt12.98□□□□□ -0.33
GAR1P28007 tP(UGG)N1tP(UGG)N1 72 nt12.98□□□□□ -0.33
GAR1P28007 tP(UGG)N2tP(UGG)N2 72 nt12.98□□□□□ -0.33
GAR1P28007 tP(UGG)O1tP(UGG)O1 72 nt12.98□□□□□ -0.33
GAR1P28007 SUF11tP(UGG)O2 72 nt12.98□□□□□ -0.33
GAR1P28007 YBR190WYBR190W 312 nt12.97□□□□□ -0.33
GAR1P28007 CCC1YLR220W 969 nt12.92□□□□□ -0.34
GAR1P28007 YOL085CYOL085C 342 nt12.92□□□□□ -0.34
GAR1P28007 VAR1Q0140 1197 nt12.86□□□□□ -0.35
GAR1P28007 RPP1BYDL130W 321 nt12.79□□□□□ -0.36
GAR1P28007 PKP1YIL042C 1185 nt12.78□□□□□ -0.36
GAR1P28007 RTC3YHR087W 336 nt12.75□□□□□ -0.37
GAR1P28007 RVS167YDR388W 1449 nt12.6□□□□□ -0.39
GAR1P28007 SCJ1YMR214W 1134 nt12.38□□□□□ -0.43
GAR1P28007 tP(UGG)O3tP(UGG)O3 72 nt12.25□□□□□ -0.45
GAR1P28007 PET122YER153C 765 nt12.23□□□□□ -0.45
GAR1P28007 SCR1SCR1 522 nt12.13□□□□□ -0.47
GAR1P28007 SSA3YBL075C 1950 nt12.12□□□□□ -0.47
GAR1P28007 SHR5YOL110W 714 nt12.06□□□□□ -0.48
GAR1P28007 YDR509WYDR509W 348 nt12.02□□□□□ -0.49
GAR1P28007 ATS1YAL020C 1002 nt12.02□□□□□ -0.49
GAR1P28007 RRN5YLR141W 1092 nt11.87□□□□□ -0.51
GAR1P28007 PUT4YOR348C 1884 nt11.85□□□□□ -0.51
GAR1P28007 YDJ1YNL064C 1230 nt11.84□□□□□ -0.51
GAR1P28007 URN1YPR152C 1398 nt11.83□□□□□ -0.52
GAR1P28007 DEP1YAL013W 1218 nt11.79□□□□□ -0.52
GAR1P28007 Q0017Q0017 162 nt11.79□□□□□ -0.52
GAR1P28007 Q0142Q0142 177 nt11.68□□□□□ -0.54
GAR1P28007 NME1NME1 340 nt11.68□□□□□ -0.54
GAR1P28007 RPN10YHR200W 807 nt11.67□□□□□ -0.54
GAR1P28007 OPI9YLR338W 858 nt11.66□□□□□ -0.54
GAR1P28007 CSM2YIL132C 642 nt11.65□□□□□ -0.54
GAR1P28007 GAR1YHR089C 618 nt11.64□□□□□ -0.55
GAR1P28007 SAH1YER043C 1350 nt11.63□□□□□ -0.55
GAR1P28007 YER088W-BYER088W-B 147 nt11.62□□□□□ -0.55
GAR1P28007 Q0182Q0182 405 nt11.62□□□□□ -0.55
GAR1P28007 RSB1YOR049C 1065 nt11.62□□□□□ -0.55
GAR1P28007 PAM17YKR065C 594 nt11.61□□□□□ -0.55
GAR1P28007 ARE1YCR048W 1833 nt11.6□□□□□ -0.55
GAR1P28007 YNL208WYNL208W 600 nt11.59□□□□□ -0.55
GAR1P28007 PAU21YOR394W 495 nt11.58□□□□□ -0.56
GAR1P28007 PAU22YPL282C 495 nt11.58□□□□□ -0.56
GAR1P28007 Q0144Q0144 330 nt11.55□□□□□ -0.56
GAR1P28007 POA1YBR022W 534 nt11.52□□□□□ -0.57
GAR1P28007 YHR049C-AYHR049C-A 297 nt11.5□□□□□ -0.57
GAR1P28007 ARO7YPR060C 771 nt11.46□□□□□ -0.57
GAR1P28007 BMT5YIL096C 1011 nt11.38□□□□□ -0.59
GAR1P28007 PUN1YLR414C 792 nt11.36□□□□□ -0.59
GAR1P28007 REG2YBR050C 1017 nt11.33□□□□□ -0.6
GAR1P28007 SEM1YDR363W-A 270 nt11.3□□□□□ -0.6
GAR1P28007 BUR6YER159C 429 nt11.29□□□□□ -0.6
GAR1P28007 MOT3YMR070W 1473 nt11.29□□□□□ -0.6
GAR1P28007 BSC6YOL137W 1494 nt11.29□□□□□ -0.6
GAR1P28007 YJR018WYJR018W 363 nt11.28□□□□□ -0.6
GAR1P28007 BUD23YCR047C 828 nt11.27□□□□□ -0.61
GAR1P28007 TIR1YER011W 765 nt11.24□□□□□ -0.61
GAR1P28007 PTC2YER089C 1395 nt11.24□□□□□ -0.61
GAR1P28007 PST2YDR032C 597 nt11.13□□□□□ -0.63
GAR1P28007 NAB2YGL122C 1578 nt11.11□□□□□ -0.63
GAR1P28007 AI5_BETAQ0075 1065 nt11.11□□□□□ -0.63
GAR1P28007 Q0255Q0255 1419 nt11.1□□□□□ -0.63
GAR1P28007 SSA1YAL005C 1929 nt11.1□□□□□ -0.63
GAR1P28007 YOR169CYOR169C 465 nt11.08□□□□□ -0.64
GAR1P28007 RPP2BYDR382W 333 nt11.07□□□□□ -0.64
GAR1P28007 YGL188CYGL188C 174 nt11.06□□□□□ -0.64
GAR1P28007 Q0010Q0010 387 nt11.01□□□□□ -0.65
GAR1P28007 YIR018C-AYIR018C-A 138 nt10.98□□□□□ -0.65
GAR1P28007 FPR4YLR449W 1179 nt10.97□□□□□ -0.65
GAR1P28007 YJR120WYJR120W 351 nt10.96□□□□□ -0.65
GAR1P28007 AI3Q0060 1248 nt10.95□□□□□ -0.66
GAR1P28007 DAL1YIR027C 1383 nt10.94□□□□□ -0.66
GAR1P28007 SRN2YLR119W 642 nt10.92□□□□□ -0.66
GAR1P28007 INM2YDR287W 879 nt10.9□□□□□ -0.66
GAR1P28007 FIS1YIL065C 468 nt10.88□□□□□ -0.67
GAR1P28007 PHO4YFR034C 939 nt10.83□□□□□ -0.68
GAR1P28007 YCR099CYCR099C 468 nt10.82□□□□□ -0.68
GAR1P28007 SRB2YHR041C 633 nt10.81□□□□□ -0.68
GAR1P28007 YBL100CYBL100C 315 nt10.78□□□□□ -0.68
GAR1P28007 ATP6Q0085 780 nt10.76□□□□□ -0.69
GAR1P28007 BDH2YAL061W 1254 nt10.75□□□□□ -0.69
GAR1P28007 ARP10YDR106W 855 nt10.74□□□□□ -0.69
GAR1P28007 SHU1YHL006C 453 nt10.73□□□□□ -0.69
GAR1P28007 SPT5YML010W 3192 nt10.71□□□□□ -0.69
GAR1P28007 WWM1YFL010C 636 nt10.71□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 14 ms