Protein–RNA interactions for Protein: Q99337

TY1B-NL2, Transposon Ty1-NL2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-NL2Q99337 YML009W-BYML009W-B 477 nt29.01■■■□□ 2.23
TY1B-NL2Q99337 NOP1YDL014W 984 nt28.09■■■□□ 2.09
TY1B-NL2Q99337 NSR1YGR159C 1245 nt27.6■■■□□ 2.01
TY1B-NL2Q99337 YKL036CYKL036C 393 nt26.94■■□□□ 1.9
TY1B-NL2Q99337 YJL027CYJL027C 417 nt25.3■■□□□ 1.64
TY1B-NL2Q99337 SCS3YGL126W 1143 nt25.07■■□□□ 1.6
TY1B-NL2Q99337 Q0297Q0297 156 nt24.95■■□□□ 1.59
TY1B-NL2Q99337 SRX1YKL086W 384 nt24.79■■□□□ 1.56
TY1B-NL2Q99337 MDJ1YFL016C 1536 nt24.14■■□□□ 1.46
TY1B-NL2Q99337 YCR051WYCR051W 669 nt23.67■■□□□ 1.38
TY1B-NL2Q99337 YOL085CYOL085C 342 nt23.13■■□□□ 1.29
TY1B-NL2Q99337 PKP1YIL042C 1185 nt22.97■■□□□ 1.27
TY1B-NL2Q99337 SCJ1YMR214W 1134 nt22.96■■□□□ 1.27
TY1B-NL2Q99337 ATS1YAL020C 1002 nt22.43■■□□□ 1.18
TY1B-NL2Q99337 RPP1BYDL130W 321 nt22.39■■□□□ 1.17
TY1B-NL2Q99337 TRN1tP(UGG)A 72 nt21.96■■□□□ 1.11
TY1B-NL2Q99337 SUF9tP(UGG)F 72 nt21.96■■□□□ 1.11
TY1B-NL2Q99337 SUF8tP(UGG)H 72 nt21.96■■□□□ 1.11
TY1B-NL2Q99337 tP(UGG)LtP(UGG)L 72 nt21.96■■□□□ 1.11
TY1B-NL2Q99337 SUF7tP(UGG)M 72 nt21.96■■□□□ 1.11
TY1B-NL2Q99337 tP(UGG)N1tP(UGG)N1 72 nt21.96■■□□□ 1.11
TY1B-NL2Q99337 tP(UGG)N2tP(UGG)N2 72 nt21.96■■□□□ 1.11
TY1B-NL2Q99337 tP(UGG)O1tP(UGG)O1 72 nt21.96■■□□□ 1.11
TY1B-NL2Q99337 SUF11tP(UGG)O2 72 nt21.96■■□□□ 1.11
TY1B-NL2Q99337 CCC1YLR220W 969 nt21.74■■□□□ 1.07
TY1B-NL2Q99337 DBP2YNL112W 1641 nt21.52■■□□□ 1.03
TY1B-NL2Q99337 PET122YER153C 765 nt21.49■■□□□ 1.03
TY1B-NL2Q99337 SCR1SCR1 522 nt21.41■■□□□ 1.02
TY1B-NL2Q99337 RTC3YHR087W 336 nt21.12■□□□□ 0.97
TY1B-NL2Q99337 tP(UGG)O3tP(UGG)O3 72 nt20.96■□□□□ 0.95
TY1B-NL2Q99337 RSB1YOR049C 1065 nt20.83■□□□□ 0.92
TY1B-NL2Q99337 RRN5YLR141W 1092 nt20.78■□□□□ 0.92
TY1B-NL2Q99337 PST2YDR032C 597 nt20.56■□□□□ 0.88
TY1B-NL2Q99337 RVS167YDR388W 1449 nt20.46■□□□□ 0.87
TY1B-NL2Q99337 YKL097CYKL097C 411 nt20.44■□□□□ 0.86
TY1B-NL2Q99337 YER088W-BYER088W-B 147 nt20.39■□□□□ 0.85
TY1B-NL2Q99337 YDJ1YNL064C 1230 nt20.13■□□□□ 0.81
TY1B-NL2Q99337 YBR190WYBR190W 312 nt20.05■□□□□ 0.8
TY1B-NL2Q99337 SHR5YOL110W 714 nt19.93■□□□□ 0.78
TY1B-NL2Q99337 SHU1YHL006C 453 nt19.73■□□□□ 0.75
TY1B-NL2Q99337 GAR1YHR089C 618 nt19.72■□□□□ 0.75
TY1B-NL2Q99337 YOR139CYOR139C 393 nt19.45■□□□□ 0.7
TY1B-NL2Q99337 YAL037C-BYAL037C-B 975 nt19.3■□□□□ 0.68
TY1B-NL2Q99337 DEP1YAL013W 1218 nt19.28■□□□□ 0.68
TY1B-NL2Q99337 NPL3YDR432W 1245 nt19.15■□□□□ 0.66
TY1B-NL2Q99337 TIR1YER011W 765 nt18.97■□□□□ 0.63
TY1B-NL2Q99337 URN1YPR152C 1398 nt18.96■□□□□ 0.63
TY1B-NL2Q99337 YNL208WYNL208W 600 nt18.79■□□□□ 0.6
TY1B-NL2Q99337 MNP1YGL068W 585 nt18.77■□□□□ 0.59
TY1B-NL2Q99337 RPN10YHR200W 807 nt18.75■□□□□ 0.59
TY1B-NL2Q99337 YOL037CYOL037C 354 nt18.6■□□□□ 0.57
TY1B-NL2Q99337 SSA1YAL005C 1929 nt18.57■□□□□ 0.56
TY1B-NL2Q99337 SRB2YHR041C 633 nt18.56■□□□□ 0.56
TY1B-NL2Q99337 YGR021WYGR021W 873 nt18.46■□□□□ 0.55
TY1B-NL2Q99337 HOM6YJR139C 1080 nt18.46■□□□□ 0.55
TY1B-NL2Q99337 WWM1YFL010C 636 nt18.42■□□□□ 0.54
TY1B-NL2Q99337 tM(CAU)CtM(CAU)C 72 nt18.4■□□□□ 0.54
TY1B-NL2Q99337 IMT4tM(CAU)E 72 nt18.4■□□□□ 0.54
TY1B-NL2Q99337 IMT3tM(CAU)J3 72 nt18.4■□□□□ 0.54
TY1B-NL2Q99337 IMT1tM(CAU)O1 72 nt18.4■□□□□ 0.54
TY1B-NL2Q99337 IMT2tM(CAU)P 72 nt18.4■□□□□ 0.54
TY1B-NL2Q99337 OPI9YLR338W 858 nt18.33■□□□□ 0.52
TY1B-NL2Q99337 BSC6YOL137W 1494 nt18.25■□□□□ 0.51
TY1B-NL2Q99337 MOT3YMR070W 1473 nt18.22■□□□□ 0.51
TY1B-NL2Q99337 RKM5YLR137W 1104 nt18.16■□□□□ 0.5
TY1B-NL2Q99337 PUS2YGL063W 1113 nt18.14■□□□□ 0.49
TY1B-NL2Q99337 SAH1YER043C 1350 nt18.14■□□□□ 0.49
TY1B-NL2Q99337 YJR120WYJR120W 351 nt18.06■□□□□ 0.48
TY1B-NL2Q99337 YJR018WYJR018W 363 nt18.05■□□□□ 0.48
TY1B-NL2Q99337 YFL021C-AYFL021C-A 855 nt17.99■□□□□ 0.47
TY1B-NL2Q99337 YLR281CYLR281C 468 nt17.93■□□□□ 0.46
TY1B-NL2Q99337 RPP2BYDR382W 333 nt17.9■□□□□ 0.46
TY1B-NL2Q99337 WHI5YOR083W 888 nt17.83■□□□□ 0.44
TY1B-NL2Q99337 PUN1YLR414C 792 nt17.82■□□□□ 0.44
TY1B-NL2Q99337 FMP45YDL222C 930 nt17.8■□□□□ 0.44
TY1B-NL2Q99337 BDH2YAL061W 1254 nt17.71■□□□□ 0.43
TY1B-NL2Q99337 SSA3YBL075C 1950 nt17.65■□□□□ 0.42
TY1B-NL2Q99337 YLR236CYLR236C 324 nt17.64■□□□□ 0.41
TY1B-NL2Q99337 MRPL8YJL063C 717 nt17.64■□□□□ 0.41
TY1B-NL2Q99337 YHR049C-AYHR049C-A 297 nt17.63■□□□□ 0.41
TY1B-NL2Q99337 PUT4YOR348C 1884 nt17.63■□□□□ 0.41
TY1B-NL2Q99337 ARE1YCR048W 1833 nt17.61■□□□□ 0.41
TY1B-NL2Q99337 DSK2YMR276W 1122 nt17.58■□□□□ 0.41
TY1B-NL2Q99337 YPR011CYPR011C 981 nt17.52■□□□□ 0.4
TY1B-NL2Q99337 YCH1YGR203W 447 nt17.49■□□□□ 0.39
TY1B-NL2Q99337 UBX6YJL048C 1191 nt17.47■□□□□ 0.39
TY1B-NL2Q99337 ADO1YJR105W 1023 nt17.44■□□□□ 0.38
TY1B-NL2Q99337 PTC2YER089C 1395 nt17.44■□□□□ 0.38
TY1B-NL2Q99337 IMP2'YIL154C 1041 nt17.42■□□□□ 0.38
TY1B-NL2Q99337 LSM3YLR438C-A 270 nt17.38■□□□□ 0.37
TY1B-NL2Q99337 YBL100CYBL100C 315 nt17.35■□□□□ 0.37
TY1B-NL2Q99337 YEL076C-AYEL076C-A 651 nt17.34■□□□□ 0.37
TY1B-NL2Q99337 YEL076CYEL076C 651 nt17.34■□□□□ 0.37
TY1B-NL2Q99337 YLR464WYLR464W 651 nt17.34■□□□□ 0.37
TY1B-NL2Q99337 YLR154C-GYLR154C-G 150 nt17.3■□□□□ 0.36
TY1B-NL2Q99337 LPX1YOR084W 1164 nt17.3■□□□□ 0.36
TY1B-NL2Q99337 BUD23YCR047C 828 nt17.26■□□□□ 0.35
TY1B-NL2Q99337 RTG1YOL067C 534 nt17.26■□□□□ 0.35
TY1B-NL2Q99337 SPP1YPL138C 1062 nt17.21■□□□□ 0.35
TY1B-NL2Q99337 POA1YBR022W 534 nt17.18■□□□□ 0.34
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms