RNA–Protein interactions for RNA: YOR156C

NFI1, Transcript of SUMO E3 ligase, yeast

Gene NFI1, Length 2,181 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NFI1	YOR156C	DCS1	Q06151	350 aa		4.7	□□□□□ -1.66
NFI1	YOR156C	YAP7	Q08182	245 aa		4.7	□□□□□ -1.66
NFI1	YOR156C	MED2	Q12124	431 aa		4.7	□□□□□ -1.66
NFI1	YOR156C	TY1B-A	O13527	1196 aa	Known RBP	4.7	□□□□□ -1.66
NFI1	YOR156C	LTV1	P34078	463 aa		4.7	□□□□□ -1.66
NFI1	YOR156C	ASC1	P38011	319 aa	Known RBP	4.7	□□□□□ -1.66
NFI1	YOR156C	OCA2	P53949	197 aa		4.7	□□□□□ -1.66
NFI1	YOR156C	ERO1	Q03103	563 aa		4.7	□□□□□ -1.66
NFI1	YOR156C	RPL15A	P05748	204 aa	Known RBP	4.69	□□□□□ -1.66
NFI1	YOR156C	ARO3	P14843	370 aa	Known RBP	4.69	□□□□□ -1.66
NFI1	YOR156C	ECM25	P32525	599 aa		4.69	□□□□□ -1.66
NFI1	YOR156C	MDL1	P33310	695 aa		4.69	□□□□□ -1.66
NFI1	YOR156C	SOR1	P35497	357 aa	Known RBP	4.69	□□□□□ -1.66
NFI1	YOR156C	MTC4	P38335	694 aa	Known RBP	4.69	□□□□□ -1.66
NFI1	YOR156C	SHO1	P40073	367 aa		4.69	□□□□□ -1.66
NFI1	YOR156C	RPR2	P40571	144 aa		4.69	□□□□□ -1.66
NFI1	YOR156C	ELP2	P42935	788 aa		4.69	□□□□□ -1.66
NFI1	YOR156C	YJL132W	P47014	750 aa		4.69	□□□□□ -1.66
NFI1	YOR156C	PCP1	P53259	346 aa		4.69	□□□□□ -1.66
NFI1	YOR156C	YIF1	P53845	314 aa	Known RBP	4.69	□□□□□ -1.66
NFI1	YOR156C	MDG1	P53885	366 aa		4.69	□□□□□ -1.66
NFI1	YOR156C	PNG1	Q02890	363 aa		4.69	□□□□□ -1.66
NFI1	YOR156C	GRS2	Q06817	618 aa		4.69	□□□□□ -1.66
NFI1	YOR156C	SOR2	Q07786	357 aa		4.69	□□□□□ -1.66
NFI1	YOR156C	DCI1	Q08558	271 aa		4.69	□□□□□ -1.66
NFI1	YOR156C	RPN5	Q12250	445 aa	Known RBP	4.69	□□□□□ -1.66
NFI1	YOR156C	COX3	P00420	269 aa		4.68	□□□□□ -1.66
NFI1	YOR156C	LPD1	P09624	499 aa	Known RBP	4.68	□□□□□ -1.66
NFI1	YOR156C	YHR054C	P38780	354 aa		4.68	□□□□□ -1.66
NFI1	YOR156C	VHS2	P40463	436 aa		4.68	□□□□□ -1.66
NFI1	YOR156C	ERP1	Q05359	219 aa	Known RBP	4.68	□□□□□ -1.66
NFI1	YOR156C	MTF1	P14908	341 aa	Known RBP	4.68	□□□□□ -1.66
NFI1	YOR156C	RPI1	P23250	407 aa	Known RBP	4.68	□□□□□ -1.66
NFI1	YOR156C	SPC110	P32380	944 aa		4.68	□□□□□ -1.66
NFI1	YOR156C	EFM4	P40516	257 aa		4.68	□□□□□ -1.66
NFI1	YOR156C	YIP1	P53039	248 aa		4.68	□□□□□ -1.66
NFI1	YOR156C	AEP3	Q12089	606 aa		4.68	□□□□□ -1.66
NFI1	YOR156C	AYT1	Q12226	474 aa		4.68	□□□□□ -1.66
NFI1	YOR156C	MTR10	Q99189	972 aa		4.68	□□□□□ -1.66
NFI1	YOR156C	RRP7	P25368	297 aa	Predicted RBP	4.67	□□□□□ -1.66
NFI1	YOR156C	APE2	P32454	952 aa	Known RBP	4.67	□□□□□ -1.66
NFI1	YOR156C	NIP1	P32497	812 aa	Known RBP	4.67	□□□□□ -1.66
NFI1	YOR156C	GDI1	P39958	451 aa	Known RBP	4.67	□□□□□ -1.66
NFI1	YOR156C	RRT5	P43607	289 aa		4.67	□□□□□ -1.66
NFI1	YOR156C	ODC1	Q03028	310 aa		4.67	□□□□□ -1.66
NFI1	YOR156C	YCR100C	P25606	316 aa		4.67	□□□□□ -1.66
NFI1	YOR156C	SWI3	P32591	825 aa		4.67	□□□□□ -1.66
NFI1	YOR156C	ZTA1	P38230	334 aa	Known RBP	4.67	□□□□□ -1.66
NFI1	YOR156C	DHH1	P39517	506 aa	Known RBP	4.67	□□□□□ -1.66
NFI1	YOR156C	PHO86	P46956	311 aa		4.67	□□□□□ -1.66
NFI1	YOR156C	ADE4	P04046	510 aa	Known RBP	4.66	□□□□□ -1.66
NFI1	YOR156C	RPL1A	P0CX43	217 aa	Known RBP	4.66	□□□□□ -1.66
NFI1	YOR156C	RPL1B	P0CX44	217 aa	Known RBP	4.66	□□□□□ -1.66
NFI1	YOR156C	RSM22	P36056	628 aa		4.66	□□□□□ -1.66
NFI1	YOR156C	RXT2	P38255	430 aa		4.66	□□□□□ -1.66
NFI1	YOR156C	NDD1	Q08887	554 aa		4.66	□□□□□ -1.66
NFI1	YOR156C	CYB2	P00175	591 aa		4.65	□□□□□ -1.66
NFI1	YOR156C	HIS4	P00815	799 aa	Known RBP	4.65	□□□□□ -1.66
NFI1	YOR156C	ATR1	P13090	542 aa		4.65	□□□□□ -1.66
NFI1	YOR156C	CTR86	P25355	563 aa		4.65	□□□□□ -1.66
NFI1	YOR156C	NDI1	P32340	513 aa		4.65	□□□□□ -1.66
NFI1	YOR156C	SWH1	P35845	1188 aa		4.65	□□□□□ -1.66
NFI1	YOR156C	YCR041W	P37265	110 aa		4.65	□□□□□ -1.66
NFI1	YOR156C	APE4	P38821	490 aa		4.65	□□□□□ -1.66
NFI1	YOR156C	YFR016C	P43597	1233 aa	Known RBP	4.65	□□□□□ -1.66
NFI1	YOR156C	YJL055W	P47044	245 aa		4.65	□□□□□ -1.66
NFI1	YOR156C	AVT4	P50944	713 aa		4.65	□□□□□ -1.66
NFI1	YOR156C	COS10	P52924	374 aa		4.65	□□□□□ -1.66
NFI1	YOR156C	SET6	Q12529	373 aa		4.65	□□□□□ -1.66
NFI1	YOR156C	NAT1	P12945	854 aa	Known RBP	4.65	□□□□□ -1.67
NFI1	YOR156C	SMY1	P32364	656 aa	Known RBP	4.65	□□□□□ -1.67
NFI1	YOR156C	GLC7	P32598	312 aa	Known RBP	4.65	□□□□□ -1.67
NFI1	YOR156C	HEL1	P36113	551 aa		4.65	□□□□□ -1.67
NFI1	YOR156C	RRN10	P38204	145 aa		4.65	□□□□□ -1.67
NFI1	YOR156C	PCA1	P38360	1216 aa		4.65	□□□□□ -1.67
NFI1	YOR156C	RRP4	P38792	359 aa	Known RBP	4.65	□□□□□ -1.67
NFI1	YOR156C	RPH1	P39956	796 aa		4.65	□□□□□ -1.67
NFI1	YOR156C	SEC28	P40509	296 aa	Known RBP	4.65	□□□□□ -1.67
NFI1	YOR156C	YLR456W	Q06199	204 aa		4.65	□□□□□ -1.67
NFI1	YOR156C	RPL20A	P0CX23	172 aa	Known RBP	4.64	□□□□□ -1.67
NFI1	YOR156C	RPL20B	P0CX24	172 aa	Predicted RBP	4.64	□□□□□ -1.67
NFI1	YOR156C	RNA14	P25298	677 aa	Known RBP	4.64	□□□□□ -1.67
NFI1	YOR156C	PMU1	P36069	295 aa		4.64	□□□□□ -1.67
NFI1	YOR156C	HEM2	P05373	342 aa		4.64	□□□□□ -1.67
NFI1	YOR156C	ILV5	P06168	395 aa	Known RBP	4.64	□□□□□ -1.67
NFI1	YOR156C	YML002W	P0CF17	737 aa		4.64	□□□□□ -1.67
NFI1	YOR156C	YAR066W	P0CX18	203 aa		4.64	□□□□□ -1.67
NFI1	YOR156C	YHR214W	P0CX19	203 aa		4.64	□□□□□ -1.67
NFI1	YOR156C	FAD1	P38913	306 aa		4.64	□□□□□ -1.67
NFI1	YOR156C	ALG8	P40351	577 aa		4.64	□□□□□ -1.67
NFI1	YOR156C	SNM1	P40993	198 aa		4.64	□□□□□ -1.67
NFI1	YOR156C	FRE4	P53746	719 aa		4.64	□□□□□ -1.67
NFI1	YOR156C	TAF12	Q03761	539 aa		4.64	□□□□□ -1.67
NFI1	YOR156C	RPN9	Q04062	393 aa	Known RBP	4.64	□□□□□ -1.67
NFI1	YOR156C	PUP2	P32379	260 aa		4.63	□□□□□ -1.67
NFI1	YOR156C	GIP3	Q03016	1276 aa		4.63	□□□□□ -1.67
NFI1	YOR156C	YPR022C	Q12139	1133 aa		4.63	□□□□□ -1.67
NFI1	YOR156C	ORT1	Q12375	292 aa		4.63	□□□□□ -1.67
NFI1	YOR156C	RMD5	Q12508	421 aa		4.63	□□□□□ -1.67
NFI1	YOR156C	ITR1	P30605	584 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms