RNA–Protein interactions for RNA: YOR156C

NFI1, Transcript of SUMO E3 ligase, yeastyeast

Gene NFI1, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NFI1YOR156C DRS1P32892 752 aaKnown RBP15.34■□□□□ 0.05
NFI1YOR156C MTC1P47018 478 aaKnown RBP15.01□□□□□ -0.01
NFI1YOR156C BFR2Q06631 534 aaKnown RBP13.38□□□□□ -0.27
NFI1YOR156C DIP2Q12220 943 aaPredicted RBP12.98□□□□□ -0.33
NFI1YOR156C AVT3P36062 692 aa12.94□□□□□ -0.34
NFI1YOR156C TFA1P36100 482 aa12.84□□□□□ -0.35
NFI1YOR156C RSE1Q04693 1361 aaKnown RBP12.13□□□□□ -0.47
NFI1YOR156C ISW2Q08773 1120 aa12.11□□□□□ -0.47
NFI1YOR156C RPG1P38249 964 aaKnown RBP11.96□□□□□ -0.5
NFI1YOR156C FAP1P53971 965 aa11.92□□□□□ -0.5
NFI1YOR156C PRI1P10363 409 aa11.91□□□□□ -0.5
NFI1YOR156C RPL17AP05740 184 aaKnown RBP11.66□□□□□ -0.54
NFI1YOR156C RPL17BP46990 184 aaKnown RBP11.66□□□□□ -0.54
NFI1YOR156C AAD16Q02895 342 aa11.61□□□□□ -0.55
NFI1YOR156C REB1P21538 810 aa11.48□□□□□ -0.57
NFI1YOR156C SPT21P35209 758 aa11.33□□□□□ -0.6
NFI1YOR156C TSR3Q12094 313 aaKnown RBP11.29□□□□□ -0.6
NFI1YOR156C RIM101P33400 625 aa11.23□□□□□ -0.61
NFI1YOR156C PRY3P47033 881 aa11.15□□□□□ -0.62
NFI1YOR156C RQC2Q12532 1038 aaKnown RBP11.09□□□□□ -0.63
NFI1YOR156C PTP3P40048 928 aa10.98□□□□□ -0.65
NFI1YOR156C OXP1P28273 1286 aa10.89□□□□□ -0.67
NFI1YOR156C YKR023WP36119 530 aaKnown RBP10.89□□□□□ -0.67
NFI1YOR156C SSP1P38871 571 aa10.83□□□□□ -0.68
NFI1YOR156C MRPL32P25348 183 aa10.82□□□□□ -0.68
NFI1YOR156C YAH1Q12184 172 aaKnown RBP10.7□□□□□ -0.7
NFI1YOR156C DMA1P38823 416 aa10.68□□□□□ -0.7
NFI1YOR156C YCK3P39962 524 aa10.68□□□□□ -0.7
NFI1YOR156C YIL055CP40523 627 aaKnown RBP10.67□□□□□ -0.7
NFI1YOR156C TFC8Q12308 588 aa10.66□□□□□ -0.7
NFI1YOR156C YLR271WQ06152 274 aa10.65□□□□□ -0.71
NFI1YOR156C HOP09932 586 aa10.64□□□□□ -0.71
NFI1YOR156C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.59□□□□□ -0.71not detected
NFI1YOR156C CDC27P38042 758 aa10.58□□□□□ -0.72
NFI1YOR156C DCD1P06773 312 aa10.58□□□□□ -0.72
NFI1YOR156C HAA1Q12753 694 aaKnown RBP10.54□□□□□ -0.72
NFI1YOR156C RSM7P47150 247 aa10.53□□□□□ -0.72
NFI1YOR156C MGA2P40578 1113 aa10.43□□□□□ -0.74
NFI1YOR156C BCH2P36122 765 aa10.38□□□□□ -0.75
NFI1YOR156C CST9Q06032 482 aa10.34□□□□□ -0.75
NFI1YOR156C AI2P03876 854 aa10.33□□□□□ -0.76
NFI1YOR156C PSD2P53037 1138 aaKnown RBP10.33□□□□□ -0.76
NFI1YOR156C BBC1P47068 1157 aa10.22□□□□□ -0.77
NFI1YOR156C EPS1P40557 701 aa10.19□□□□□ -0.78
NFI1YOR156C BDF1P35817 686 aa10.13□□□□□ -0.79
NFI1YOR156C SCY1P53009 804 aa10.1□□□□□ -0.79
NFI1YOR156C MAP2P38174 421 aaKnown RBP10.08□□□□□ -0.8
NFI1YOR156C UBP10P53874 792 aaPredicted RBP10.08□□□□□ -0.8
NFI1YOR156C SAS10Q12136 610 aaPredicted RBP10.07□□□□□ -0.8
NFI1YOR156C MRM1P25270 412 aa10.03□□□□□ -0.8
NFI1YOR156C YGL015CP33199 130 aa10.01□□□□□ -0.81
NFI1YOR156C RAM2P29703 316 aa10□□□□□ -0.81
NFI1YOR156C RCR1P38212 213 aa9.97□□□□□ -0.81
NFI1YOR156C RTG3P38165 486 aa9.92□□□□□ -0.82
NFI1YOR156C SLX5P32828 619 aaKnown RBP9.88□□□□□ -0.83
NFI1YOR156C LEO1P38439 464 aa9.84□□□□□ -0.83
NFI1YOR156C SET1P38827 1080 aaKnown RBP9.84□□□□□ -0.83
NFI1YOR156C VPS29P38759 282 aa9.81□□□□□ -0.84
NFI1YOR156C MAK11P20484 414 aaKnown RBP9.81□□□□□ -0.84
NFI1YOR156C LEU3P08638 886 aa9.8□□□□□ -0.84
NFI1YOR156C YPR148CQ06523 435 aa9.74□□□□□ -0.85
NFI1YOR156C YMR1P47147 688 aaKnown RBP RIP-Chip data9.69□□□□□ -0.86not detected
NFI1YOR156C IFH1P39520 1085 aa9.67□□□□□ -0.86
NFI1YOR156C STS1P38637 319 aa9.67□□□□□ -0.86
NFI1YOR156C COQ8P27697 501 aa9.66□□□□□ -0.86
NFI1YOR156C VPS70P47161 811 aa9.65□□□□□ -0.86
NFI1YOR156C TIF4632P39936 914 aaKnown RBP9.63□□□□□ -0.87
NFI1YOR156C CKB1P43639 278 aa9.63□□□□□ -0.87
NFI1YOR156C DBP1P24784 617 aaKnown RBP9.62□□□□□ -0.87
NFI1YOR156C NSR1P27476 414 aaKnown RBP RIP-Chip data9.6□□□□□ -0.87not detected
NFI1YOR156C TAF7Q05021 590 aa9.6□□□□□ -0.87
NFI1YOR156C TGL3P40308 642 aa9.59□□□□□ -0.87
NFI1YOR156C YFR006WP43590 535 aa9.59□□□□□ -0.87
NFI1YOR156C YOR238WQ08634 303 aa9.59□□□□□ -0.87
NFI1YOR156C NOP53Q12080 455 aaKnown RBP9.58□□□□□ -0.88
NFI1YOR156C EDS1P38073 919 aa9.57□□□□□ -0.88
NFI1YOR156C MIF2P35201 549 aa9.56□□□□□ -0.88
NFI1YOR156C SPB4P25808 606 aaPredicted RBP9.55□□□□□ -0.88
NFI1YOR156C YAP5P40574 245 aa9.52□□□□□ -0.89
NFI1YOR156C RPN1P38764 993 aaKnown RBP9.49□□□□□ -0.89
NFI1YOR156C DSF2P38213 736 aa9.48□□□□□ -0.89
NFI1YOR156C PIB1Q06651 286 aa9.47□□□□□ -0.89
NFI1YOR156C PTC3P34221 468 aaKnown RBP9.47□□□□□ -0.89
NFI1YOR156C PBS2P08018 668 aa9.46□□□□□ -0.89
NFI1YOR156C VMA1P17255 1071 aaKnown RBP9.43□□□□□ -0.9
NFI1YOR156C REF2P42073 533 aaPredicted RBP9.4□□□□□ -0.91
NFI1YOR156C MST1P07236 462 aa9.39□□□□□ -0.91
NFI1YOR156C SAM3Q08986 587 aa9.32□□□□□ -0.92
NFI1YOR156C MAM3Q12296 706 aa9.32□□□□□ -0.92
NFI1YOR156C GRE2Q12068 342 aaKnown RBP9.3□□□□□ -0.92
NFI1YOR156C COX6P00427 148 aa9.29□□□□□ -0.92
NFI1YOR156C GUT1P32190 709 aa9.29□□□□□ -0.92
NFI1YOR156C MAK21Q12176 1025 aaKnown RBP9.29□□□□□ -0.92
NFI1YOR156C ATH1P48016 1211 aa9.29□□□□□ -0.92
NFI1YOR156C NUP42P49686 430 aaKnown RBP9.29□□□□□ -0.92
NFI1YOR156C YNR021WP53723 404 aaKnown RBP9.29□□□□□ -0.92
NFI1YOR156C IES2P40154 320 aa9.27□□□□□ -0.92
NFI1YOR156C UBP14P38237 781 aaKnown RBP9.26□□□□□ -0.93
NFI1YOR156C DIT2P21595 489 aa9.24□□□□□ -0.93
NFI1YOR156C YDR090CQ03193 310 aa9.24□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms