Protein–RNA interactions for Protein: P50944

AVT4, Vacuolar amino acid transporter 4, yeastyeast

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AVT4P50944 NSR1YGR159C 1245 nt17.62■□□□□ 0.41
AVT4P50944 YML009W-BYML009W-B 477 nt17.5■□□□□ 0.39
AVT4P50944 NOP1YDL014W 984 nt16.99■□□□□ 0.31
AVT4P50944 MDJ1YFL016C 1536 nt15.76■□□□□ 0.11
AVT4P50944 YKL036CYKL036C 393 nt15.47■□□□□ 0.07
AVT4P50944 SRX1YKL086W 384 nt14.83□□□□□ -0.04
AVT4P50944 Q0297Q0297 156 nt14.8□□□□□ -0.04
AVT4P50944 YJL027CYJL027C 417 nt14.58□□□□□ -0.08
AVT4P50944 YCR051WYCR051W 669 nt14.02□□□□□ -0.17
AVT4P50944 SCS3YGL126W 1143 nt13.94□□□□□ -0.18
AVT4P50944 DBP2YNL112W 1641 nt13.88□□□□□ -0.19
AVT4P50944 YBR190WYBR190W 312 nt13.55□□□□□ -0.24
AVT4P50944 TRN1tP(UGG)A 72 nt13.52□□□□□ -0.25
AVT4P50944 SUF9tP(UGG)F 72 nt13.52□□□□□ -0.25
AVT4P50944 SUF8tP(UGG)H 72 nt13.52□□□□□ -0.25
AVT4P50944 tP(UGG)LtP(UGG)L 72 nt13.52□□□□□ -0.25
AVT4P50944 SUF7tP(UGG)M 72 nt13.52□□□□□ -0.25
AVT4P50944 tP(UGG)N1tP(UGG)N1 72 nt13.52□□□□□ -0.25
AVT4P50944 tP(UGG)N2tP(UGG)N2 72 nt13.52□□□□□ -0.25
AVT4P50944 tP(UGG)O1tP(UGG)O1 72 nt13.52□□□□□ -0.25
AVT4P50944 SUF11tP(UGG)O2 72 nt13.52□□□□□ -0.25
AVT4P50944 YOL085CYOL085C 342 nt13.38□□□□□ -0.27
AVT4P50944 CCC1YLR220W 969 nt13.34□□□□□ -0.27
AVT4P50944 RPP1BYDL130W 321 nt13.27□□□□□ -0.29
AVT4P50944 SSA3YBL075C 1950 nt13.22□□□□□ -0.29
AVT4P50944 RTC3YHR087W 336 nt13.21□□□□□ -0.29
AVT4P50944 PKP1YIL042C 1185 nt13.16□□□□□ -0.3
AVT4P50944 RVS167YDR388W 1449 nt13.05□□□□□ -0.32
AVT4P50944 SCJ1YMR214W 1134 nt12.87□□□□□ -0.35
AVT4P50944 tP(UGG)O3tP(UGG)O3 72 nt12.71□□□□□ -0.37
AVT4P50944 PET122YER153C 765 nt12.67□□□□□ -0.38
AVT4P50944 SHR5YOL110W 714 nt12.54□□□□□ -0.4
AVT4P50944 SCR1SCR1 522 nt12.52□□□□□ -0.41
AVT4P50944 PUT4YOR348C 1884 nt12.42□□□□□ -0.42
AVT4P50944 ATS1YAL020C 1002 nt12.42□□□□□ -0.42
AVT4P50944 YDJ1YNL064C 1230 nt12.33□□□□□ -0.44
AVT4P50944 URN1YPR152C 1398 nt12.3□□□□□ -0.44
AVT4P50944 RRN5YLR141W 1092 nt12.29□□□□□ -0.44
AVT4P50944 DEP1YAL013W 1218 nt12.19□□□□□ -0.46
AVT4P50944 OPI9YLR338W 858 nt12.18□□□□□ -0.46
AVT4P50944 ARE1YCR048W 1833 nt12.14□□□□□ -0.47
AVT4P50944 SAH1YER043C 1350 nt12.11□□□□□ -0.47
AVT4P50944 RPN10YHR200W 807 nt12.11□□□□□ -0.47
AVT4P50944 YER088W-BYER088W-B 147 nt12.04□□□□□ -0.48
AVT4P50944 GAR1YHR089C 618 nt12.04□□□□□ -0.48
AVT4P50944 YNL208WYNL208W 600 nt12.04□□□□□ -0.48
AVT4P50944 POA1YBR022W 534 nt12.01□□□□□ -0.49
AVT4P50944 YHR049C-AYHR049C-A 297 nt11.98□□□□□ -0.49
AVT4P50944 RSB1YOR049C 1065 nt11.98□□□□□ -0.49
AVT4P50944 PUN1YLR414C 792 nt11.84□□□□□ -0.51
AVT4P50944 BSC6YOL137W 1494 nt11.79□□□□□ -0.52
AVT4P50944 YJR018WYJR018W 363 nt11.73□□□□□ -0.53
AVT4P50944 SPT5YML010W 3192 nt11.7□□□□□ -0.54
AVT4P50944 PTC2YER089C 1395 nt11.68□□□□□ -0.54
AVT4P50944 BUD23YCR047C 828 nt11.68□□□□□ -0.54
AVT4P50944 TIR1YER011W 765 nt11.67□□□□□ -0.54
AVT4P50944 SSA4YER103W 1929 nt11.6□□□□□ -0.55
AVT4P50944 NAB2YGL122C 1578 nt11.59□□□□□ -0.55
AVT4P50944 PST2YDR032C 597 nt11.54□□□□□ -0.56
AVT4P50944 SSA1YAL005C 1929 nt11.54□□□□□ -0.56
AVT4P50944 YJR120WYJR120W 351 nt11.47□□□□□ -0.57
AVT4P50944 RPP2BYDR382W 333 nt11.46□□□□□ -0.57
AVT4P50944 DAL1YIR027C 1383 nt11.4□□□□□ -0.59
AVT4P50944 INM2YDR287W 879 nt11.37□□□□□ -0.59
AVT4P50944 FIS1YIL065C 468 nt11.37□□□□□ -0.59
AVT4P50944 FPR4YLR449W 1179 nt11.33□□□□□ -0.6
AVT4P50944 PHO4YFR034C 939 nt11.27□□□□□ -0.61
AVT4P50944 BDF1YLR399C 2061 nt11.27□□□□□ -0.61
AVT4P50944 SRB2YHR041C 633 nt11.26□□□□□ -0.61
AVT4P50944 BDH2YAL061W 1254 nt11.19□□□□□ -0.62
AVT4P50944 YBL100CYBL100C 315 nt11.19□□□□□ -0.62
AVT4P50944 YPS1YLR120C 1710 nt11.13□□□□□ -0.63
AVT4P50944 MEP2YNL142W 1500 nt11.1□□□□□ -0.63
AVT4P50944 SHU1YHL006C 453 nt11.1□□□□□ -0.63
AVT4P50944 TAT1YBR069C 1860 nt11.1□□□□□ -0.63
AVT4P50944 WWM1YFL010C 636 nt11.09□□□□□ -0.63
AVT4P50944 FUN26YAL022C 1554 nt11.05□□□□□ -0.64
AVT4P50944 YDR095CYDR095C 411 nt11.03□□□□□ -0.64
AVT4P50944 YGR021WYGR021W 873 nt11.02□□□□□ -0.65
AVT4P50944 LSM3YLR438C-A 270 nt11.02□□□□□ -0.65
AVT4P50944 YHR165W-AYHR165W-A 312 nt11.01□□□□□ -0.65
AVT4P50944 TRM9YML014W 840 nt11.01□□□□□ -0.65
AVT4P50944 YKL097CYKL097C 411 nt10.98□□□□□ -0.65
AVT4P50944 PAC11YDR488C 1602 nt10.98□□□□□ -0.65
AVT4P50944 YFL021C-AYFL021C-A 855 nt10.96□□□□□ -0.65
AVT4P50944 YAL037C-BYAL037C-B 975 nt10.96□□□□□ -0.65
AVT4P50944 ALF1YNL148C 765 nt10.95□□□□□ -0.66
AVT4P50944 HOM6YJR139C 1080 nt10.94□□□□□ -0.66
AVT4P50944 CCT6YDR188W 1641 nt10.91□□□□□ -0.66
AVT4P50944 DCW1YKL046C 1350 nt10.89□□□□□ -0.67
AVT4P50944 SUF2tP(AGG)C 72 nt10.86□□□□□ -0.67
AVT4P50944 SUF10tP(AGG)N 72 nt10.86□□□□□ -0.67
AVT4P50944 RPP2AYOL039W 321 nt10.84□□□□□ -0.67
AVT4P50944 MNP1YGL068W 585 nt10.82□□□□□ -0.68
AVT4P50944 SIS1YNL007C 1059 nt10.79□□□□□ -0.68
AVT4P50944 PTP1YDL230W 1008 nt10.78□□□□□ -0.68
AVT4P50944 RKM5YLR137W 1104 nt10.78□□□□□ -0.68
AVT4P50944 EMI2YDR516C 1503 nt10.78□□□□□ -0.68
AVT4P50944 YMR090WYMR090W 684 nt10.77□□□□□ -0.69
AVT4P50944 NVJ2YPR091C 2313 nt10.75□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms