Protein–RNA interactions for Protein: P0CX43

RPL1A, 60S ribosomal protein L1-A, yeastyeast

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL1AP0CX43 YML009W-BYML009W-B 477 nt19.82■□□□□ 0.76
RPL1AP0CX43 NOP1YDL014W 984 nt19.44■□□□□ 0.7
RPL1AP0CX43 NSR1YGR159C 1245 nt19.36■□□□□ 0.69
RPL1AP0CX43 YKL036CYKL036C 393 nt18.32■□□□□ 0.52
RPL1AP0CX43 Q0297Q0297 156 nt17.18■□□□□ 0.34
RPL1AP0CX43 YJL027CYJL027C 417 nt17.17■□□□□ 0.34
RPL1AP0CX43 SRX1YKL086W 384 nt17■□□□□ 0.31
RPL1AP0CX43 SCS3YGL126W 1143 nt16.88■□□□□ 0.29
RPL1AP0CX43 MDJ1YFL016C 1536 nt16.8■□□□□ 0.28
RPL1AP0CX43 YCR051WYCR051W 669 nt16.14■□□□□ 0.17
RPL1AP0CX43 YOL085CYOL085C 342 nt15.87■□□□□ 0.13
RPL1AP0CX43 PKP1YIL042C 1185 nt15.56■□□□□ 0.08
RPL1AP0CX43 SCJ1YMR214W 1134 nt15.48■□□□□ 0.07
RPL1AP0CX43 RPP1BYDL130W 321 nt15.4■□□□□ 0.06
RPL1AP0CX43 ATS1YAL020C 1002 nt15.22■□□□□ 0.03
RPL1AP0CX43 TRN1tP(UGG)A 72 nt15.13■□□□□ 0.01
RPL1AP0CX43 SUF9tP(UGG)F 72 nt15.13■□□□□ 0.01
RPL1AP0CX43 SUF8tP(UGG)H 72 nt15.13■□□□□ 0.01
RPL1AP0CX43 tP(UGG)LtP(UGG)L 72 nt15.13■□□□□ 0.01
RPL1AP0CX43 SUF7tP(UGG)M 72 nt15.13■□□□□ 0.01
RPL1AP0CX43 tP(UGG)N1tP(UGG)N1 72 nt15.13■□□□□ 0.01
RPL1AP0CX43 tP(UGG)N2tP(UGG)N2 72 nt15.13■□□□□ 0.01
RPL1AP0CX43 tP(UGG)O1tP(UGG)O1 72 nt15.13■□□□□ 0.01
RPL1AP0CX43 SUF11tP(UGG)O2 72 nt15.13■□□□□ 0.01
RPL1AP0CX43 DBP2YNL112W 1641 nt15.05■□□□□ -0
RPL1AP0CX43 CCC1YLR220W 969 nt14.96□□□□□ -0.01
RPL1AP0CX43 PET122YER153C 765 nt14.66□□□□□ -0.06
RPL1AP0CX43 SCR1SCR1 522 nt14.61□□□□□ -0.07
RPL1AP0CX43 tP(UGG)O3tP(UGG)O3 72 nt14.44□□□□□ -0.1
RPL1AP0CX43 RRN5YLR141W 1092 nt14.29□□□□□ -0.12
RPL1AP0CX43 YBR190WYBR190W 312 nt14.23□□□□□ -0.13
RPL1AP0CX43 RVS167YDR388W 1449 nt14.22□□□□□ -0.13
RPL1AP0CX43 RSB1YOR049C 1065 nt14.09□□□□□ -0.15
RPL1AP0CX43 RTC3YHR087W 336 nt14.07□□□□□ -0.16
RPL1AP0CX43 PST2YDR032C 597 nt14.05□□□□□ -0.16
RPL1AP0CX43 YER088W-BYER088W-B 147 nt14.01□□□□□ -0.17
RPL1AP0CX43 YDJ1YNL064C 1230 nt13.99□□□□□ -0.17
RPL1AP0CX43 SHR5YOL110W 714 nt13.83□□□□□ -0.2
RPL1AP0CX43 YKL097CYKL097C 411 nt13.68□□□□□ -0.22
RPL1AP0CX43 GAR1YHR089C 618 nt13.58□□□□□ -0.24
RPL1AP0CX43 SHU1YHL006C 453 nt13.36□□□□□ -0.27
RPL1AP0CX43 DEP1YAL013W 1218 nt13.29□□□□□ -0.28
RPL1AP0CX43 URN1YPR152C 1398 nt13.19□□□□□ -0.3
RPL1AP0CX43 YNL208WYNL208W 600 nt13.13□□□□□ -0.31
RPL1AP0CX43 TIR1YER011W 765 nt13.12□□□□□ -0.31
RPL1AP0CX43 YOR139CYOR139C 393 nt13.08□□□□□ -0.32
RPL1AP0CX43 RPN10YHR200W 807 nt13.07□□□□□ -0.32
RPL1AP0CX43 YAL037C-BYAL037C-B 975 nt13.03□□□□□ -0.32
RPL1AP0CX43 OPI9YLR338W 858 nt12.92□□□□□ -0.34
RPL1AP0CX43 SSA1YAL005C 1929 nt12.88□□□□□ -0.35
RPL1AP0CX43 NPL3YDR432W 1245 nt12.85□□□□□ -0.35
RPL1AP0CX43 SRB2YHR041C 633 nt12.75□□□□□ -0.37
RPL1AP0CX43 SAH1YER043C 1350 nt12.72□□□□□ -0.37
RPL1AP0CX43 PUT4YOR348C 1884 nt12.7□□□□□ -0.38
RPL1AP0CX43 YGR021WYGR021W 873 nt12.67□□□□□ -0.38
RPL1AP0CX43 HOM6YJR139C 1080 nt12.65□□□□□ -0.38
RPL1AP0CX43 MNP1YGL068W 585 nt12.64□□□□□ -0.39
RPL1AP0CX43 WWM1YFL010C 636 nt12.62□□□□□ -0.39
RPL1AP0CX43 YJR018WYJR018W 363 nt12.61□□□□□ -0.39
RPL1AP0CX43 YOL037CYOL037C 354 nt12.59□□□□□ -0.39
RPL1AP0CX43 tM(CAU)CtM(CAU)C 72 nt12.54□□□□□ -0.4
RPL1AP0CX43 IMT4tM(CAU)E 72 nt12.54□□□□□ -0.4
RPL1AP0CX43 IMT3tM(CAU)J3 72 nt12.54□□□□□ -0.4
RPL1AP0CX43 IMT1tM(CAU)O1 72 nt12.54□□□□□ -0.4
RPL1AP0CX43 IMT2tM(CAU)P 72 nt12.54□□□□□ -0.4
RPL1AP0CX43 PUN1YLR414C 792 nt12.54□□□□□ -0.4
RPL1AP0CX43 YJR120WYJR120W 351 nt12.52□□□□□ -0.41
RPL1AP0CX43 ARE1YCR048W 1833 nt12.51□□□□□ -0.41
RPL1AP0CX43 RKM5YLR137W 1104 nt12.46□□□□□ -0.41
RPL1AP0CX43 RPP2BYDR382W 333 nt12.45□□□□□ -0.42
RPL1AP0CX43 YFL021C-AYFL021C-A 855 nt12.41□□□□□ -0.42
RPL1AP0CX43 SSA3YBL075C 1950 nt12.35□□□□□ -0.43
RPL1AP0CX43 YHR049C-AYHR049C-A 297 nt12.32□□□□□ -0.44
RPL1AP0CX43 PTC2YER089C 1395 nt12.31□□□□□ -0.44
RPL1AP0CX43 BDH2YAL061W 1254 nt12.29□□□□□ -0.44
RPL1AP0CX43 PUS2YGL063W 1113 nt12.28□□□□□ -0.44
RPL1AP0CX43 YLR281CYLR281C 468 nt12.28□□□□□ -0.44
RPL1AP0CX43 POA1YBR022W 534 nt12.26□□□□□ -0.45
RPL1AP0CX43 Q0182Q0182 405 nt12.23□□□□□ -0.45
RPL1AP0CX43 LSM3YLR438C-A 270 nt12.21□□□□□ -0.45
RPL1AP0CX43 MOT3YMR070W 1473 nt12.2□□□□□ -0.46
RPL1AP0CX43 WHI5YOR083W 888 nt12.17□□□□□ -0.46
RPL1AP0CX43 INM2YDR287W 879 nt12.11□□□□□ -0.47
RPL1AP0CX43 NAB2YGL122C 1578 nt12.09□□□□□ -0.47
RPL1AP0CX43 BUD23YCR047C 828 nt12.06□□□□□ -0.48
RPL1AP0CX43 YBL100CYBL100C 315 nt12.05□□□□□ -0.48
RPL1AP0CX43 BSC6YOL137W 1494 nt12.04□□□□□ -0.48
RPL1AP0CX43 DAL1YIR027C 1383 nt12.03□□□□□ -0.48
RPL1AP0CX43 FPR4YLR449W 1179 nt11.98□□□□□ -0.49
RPL1AP0CX43 TRM9YML014W 840 nt11.98□□□□□ -0.49
RPL1AP0CX43 YPR011CYPR011C 981 nt11.98□□□□□ -0.49
RPL1AP0CX43 FMP45YDL222C 930 nt11.97□□□□□ -0.49
RPL1AP0CX43 FIS1YIL065C 468 nt11.97□□□□□ -0.49
RPL1AP0CX43 DSK2YMR276W 1122 nt11.96□□□□□ -0.49
RPL1AP0CX43 FUN26YAL022C 1554 nt11.93□□□□□ -0.5
RPL1AP0CX43 PHO4YFR034C 939 nt11.91□□□□□ -0.5
RPL1AP0CX43 IMP2'YIL154C 1041 nt11.91□□□□□ -0.5
RPL1AP0CX43 YLR236CYLR236C 324 nt11.91□□□□□ -0.5
RPL1AP0CX43 MRPL8YJL063C 717 nt11.89□□□□□ -0.51
RPL1AP0CX43 YCH1YGR203W 447 nt11.88□□□□□ -0.51
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms