RNA–Protein interactions for RNA: YBR295W

PCA1, Transcript of Cadmium transporting P-type ATPase, yeastyeast

Gene PCA1, Length 3,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCA1YBR295W OSW7P43611 510 aa5.43□□□□□ -1.54
PCA1YBR295W YMR196WQ04336 1088 aa5.43□□□□□ -1.54
PCA1YBR295W YLR257WQ06146 321 aaKnown RBP5.43□□□□□ -1.54
PCA1YBR295W SPT5P27692 1063 aaKnown RBP5.43□□□□□ -1.54
PCA1YBR295W LAM6Q08001 693 aa5.43□□□□□ -1.54
PCA1YBR295W TY4B-PA0A0B7P3V8 1104 aa5.42□□□□□ -1.54
PCA1YBR295W SRP54P20424 541 aaKnown RBP5.42□□□□□ -1.54
PCA1YBR295W ASF1P32447 279 aa5.42□□□□□ -1.54
PCA1YBR295W SLP1Q12232 587 aa5.42□□□□□ -1.54
PCA1YBR295W TPS3P38426 1054 aaKnown RBP5.42□□□□□ -1.54
PCA1YBR295W RRP9Q06506 573 aaKnown RBP5.42□□□□□ -1.54
PCA1YBR295W PSR1Q07800 427 aa5.42□□□□□ -1.54
PCA1YBR295W XRN1P22147 1528 aaKnown RBP5.42□□□□□ -1.54
PCA1YBR295W SWH1P35845 1188 aa5.42□□□□□ -1.54
PCA1YBR295W MTR4P47047 1073 aaKnown RBP5.42□□□□□ -1.54
PCA1YBR295W GGA1Q06336 557 aa5.42□□□□□ -1.54
PCA1YBR295W SSA4P22202 642 aaKnown RBP5.41□□□□□ -1.54
PCA1YBR295W RTT106P40161 455 aa5.41□□□□□ -1.54
PCA1YBR295W NUF2P33895 451 aa5.41□□□□□ -1.54
PCA1YBR295W ARL1P38116 183 aaKnown RBP5.41□□□□□ -1.54
PCA1YBR295W CLF1Q12309 687 aaPredicted RBP5.41□□□□□ -1.54
PCA1YBR295W UBP1P25037 809 aa5.4□□□□□ -1.54
PCA1YBR295W RIX7Q07844 837 aaKnown RBP5.4□□□□□ -1.54
PCA1YBR295W PUS1Q12211 544 aaKnown RBP5.4□□□□□ -1.55
PCA1YBR295W NOT3P06102 836 aaKnown RBP5.39□□□□□ -1.55
PCA1YBR295W PSO2P30620 661 aa5.39□□□□□ -1.55
PCA1YBR295W YMR1P47147 688 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
PCA1YBR295W NOP14Q99207 810 aaKnown RBP5.39□□□□□ -1.55
PCA1YBR295W MAK11P20484 414 aaKnown RBP5.39□□□□□ -1.55
PCA1YBR295W KNS1P32350 737 aaPredicted RBP5.39□□□□□ -1.55
PCA1YBR295W PSD2P53037 1138 aaKnown RBP5.39□□□□□ -1.55
PCA1YBR295W RNT1Q02555 471 aa5.39□□□□□ -1.55
PCA1YBR295W VPS60Q03390 229 aa5.39□□□□□ -1.55
PCA1YBR295W NDL1Q06568 189 aa5.39□□□□□ -1.55
PCA1YBR295W YOR389WQ08912 624 aa5.39□□□□□ -1.55
PCA1YBR295W SWI3P32591 825 aa5.39□□□□□ -1.55
PCA1YBR295W TAF1P46677 1066 aa5.39□□□□□ -1.55
PCA1YBR295W TIM11P81449 96 aaPredicted RBP5.39□□□□□ -1.55
PCA1YBR295W BRE1Q07457 700 aaKnown RBP5.39□□□□□ -1.55
PCA1YBR295W BEM4P39011 633 aa5.38□□□□□ -1.55
PCA1YBR295W ARP5P53946 755 aa5.38□□□□□ -1.55
PCA1YBR295W VPS30Q02948 557 aa5.38□□□□□ -1.55
PCA1YBR295W ARR1Q06596 294 aa5.38□□□□□ -1.55
PCA1YBR295W YKR023WP36119 530 aaKnown RBP5.38□□□□□ -1.55
PCA1YBR295W GDT1P38301 280 aaPredicted RBP5.38□□□□□ -1.55
PCA1YBR295W TOM71P38825 639 aaKnown RBP5.38□□□□□ -1.55
PCA1YBR295W SEC27P41811 889 aaKnown RBP5.38□□□□□ -1.55
PCA1YBR295W HUL5P53119 910 aa5.38□□□□□ -1.55
PCA1YBR295W RRB1Q04225 511 aaKnown RBP5.38□□□□□ -1.55
PCA1YBR295W MMS1Q06211 1407 aa5.38□□□□□ -1.55
PCA1YBR295W RPG1P38249 964 aaKnown RBP5.38□□□□□ -1.55
PCA1YBR295W YDR341CQ05506 607 aaKnown RBP5.38□□□□□ -1.55
PCA1YBR295W PEX19Q07418 342 aa5.38□□□□□ -1.55
PCA1YBR295W SSP1P38871 571 aa5.37□□□□□ -1.55
PCA1YBR295W KAR3P17119 729 aa5.37□□□□□ -1.55
PCA1YBR295W SEC26P41810 973 aaKnown RBP5.37□□□□□ -1.55
PCA1YBR295W TFG1P41895 735 aaPredicted RBP5.37□□□□□ -1.55
PCA1YBR295W KIP3P53086 805 aaKnown RBP5.37□□□□□ -1.55
PCA1YBR295W JJJ1P53863 590 aa5.37□□□□□ -1.55
PCA1YBR295W RPL5P26321 297 aaKnown RBP5.37□□□□□ -1.55
PCA1YBR295W BRF1P29056 596 aa5.37□□□□□ -1.55
PCA1YBR295W YGL140CP53120 1219 aa5.37□□□□□ -1.55
PCA1YBR295W GDE1Q02979 1223 aa5.37□□□□□ -1.55
PCA1YBR295W UTP4Q06679 776 aaKnown RBP5.37□□□□□ -1.55
PCA1YBR295W REV3P14284 1504 aa5.37□□□□□ -1.55
PCA1YBR295W PCT1P13259 424 aa5.36□□□□□ -1.55
PCA1YBR295W ESC2Q06340 456 aa5.36□□□□□ -1.55
PCA1YBR295W LSP1Q12230 341 aaKnown RBP5.36□□□□□ -1.55
PCA1YBR295W SIN3P22579 1536 aa5.36□□□□□ -1.55
PCA1YBR295W PSK2Q08217 1101 aa5.36□□□□□ -1.55
PCA1YBR295W YMR102CQ03177 834 aa5.36□□□□□ -1.55
PCA1YBR295W MSP1P28737 362 aa5.35□□□□□ -1.55
PCA1YBR295W BNI4P53858 892 aa5.35□□□□□ -1.55
PCA1YBR295W SYH1Q02875 849 aaKnown RBP5.35□□□□□ -1.55
PCA1YBR295W DNA2P38859 1522 aa5.35□□□□□ -1.55
PCA1YBR295W TOP2P06786 1428 aaKnown RBP5.35□□□□□ -1.55
PCA1YBR295W CIN4P39110 191 aa5.35□□□□□ -1.55
PCA1YBR295W OCA1P50946 238 aaPredicted RBP5.35□□□□□ -1.55
PCA1YBR295W KEX2P13134 814 aa5.35□□□□□ -1.55
PCA1YBR295W PXR1P53335 271 aaPredicted RBP5.35□□□□□ -1.55
PCA1YBR295W FAR11P53917 953 aa5.35□□□□□ -1.55
PCA1YBR295W SEC23P15303 768 aaKnown RBP5.34□□□□□ -1.55
PCA1YBR295W DPH5P32469 300 aaPredicted RBP5.34□□□□□ -1.55
PCA1YBR295W CLN1P20437 546 aa5.34□□□□□ -1.55
PCA1YBR295W VPS24P36095 224 aaKnown RBP5.34□□□□□ -1.55
PCA1YBR295W NPR3P38742 1146 aa5.34□□□□□ -1.55
PCA1YBR295W BTN2P53286 410 aa5.34□□□□□ -1.55
PCA1YBR295W SSK2P53599 1579 aa5.34□□□□□ -1.55
PCA1YBR295W SPR3P41901 512 aa5.34□□□□□ -1.56
PCA1YBR295W DNM1P54861 757 aa5.34□□□□□ -1.56
PCA1YBR295W VMS1Q04311 632 aaKnown RBP5.34□□□□□ -1.56
PCA1YBR295W ORM2Q06144 216 aa5.34□□□□□ -1.56
PCA1YBR295W WHI5Q12416 295 aa5.34□□□□□ -1.56
PCA1YBR295W TCD1P38756 429 aa5.33□□□□□ -1.56
PCA1YBR295W RAD3P06839 778 aa5.33□□□□□ -1.56
PCA1YBR295W NMD3P38861 518 aaKnown RBP5.33□□□□□ -1.56
PCA1YBR295W NDC80P40460 691 aa5.33□□□□□ -1.56
PCA1YBR295W AVO1Q08236 1176 aa5.33□□□□□ -1.56
PCA1YBR295W RPL17AP05740 184 aaKnown RBP5.33□□□□□ -1.56
PCA1YBR295W OLA1P38219 394 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms