Protein–RNA interactions for Protein: P53335

PXR1, Protein PXR1, yeastyeast

Predicted RBP Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PXR1P53335 NSR1YGR159C 1245 nt17.8■□□□□ 0.44
PXR1P53335 YML009W-BYML009W-B 477 nt17.67■□□□□ 0.42
PXR1P53335 NOP1YDL014W 984 nt17.17■□□□□ 0.34
PXR1P53335 MDJ1YFL016C 1536 nt16.59■□□□□ 0.25
PXR1P53335 SSA3YBL075C 1950 nt16.23■□□□□ 0.19
PXR1P53335 YKL036CYKL036C 393 nt15.68■□□□□ 0.1
PXR1P53335 YJL027CYJL027C 417 nt15.18■□□□□ 0.02
PXR1P53335 Q0297Q0297 156 nt15.02■□□□□ -0
PXR1P53335 SRX1YKL086W 384 nt15.02■□□□□ -0
PXR1P53335 YBR190WYBR190W 312 nt14.44□□□□□ -0.1
PXR1P53335 DBP2YNL112W 1641 nt14.16□□□□□ -0.14
PXR1P53335 SCS3YGL126W 1143 nt14.16□□□□□ -0.14
PXR1P53335 YCR051WYCR051W 669 nt14.14□□□□□ -0.15
PXR1P53335 RTC3YHR087W 336 nt14.07□□□□□ -0.16
PXR1P53335 PUT4YOR348C 1884 nt14.07□□□□□ -0.16
PXR1P53335 SSA4YER103W 1929 nt13.94□□□□□ -0.18
PXR1P53335 SPT5YML010W 3192 nt13.76□□□□□ -0.21
PXR1P53335 PAC11YDR488C 1602 nt13.71□□□□□ -0.22
PXR1P53335 TRN1tP(UGG)A 72 nt13.7□□□□□ -0.22
PXR1P53335 SUF9tP(UGG)F 72 nt13.7□□□□□ -0.22
PXR1P53335 SUF8tP(UGG)H 72 nt13.7□□□□□ -0.22
PXR1P53335 tP(UGG)LtP(UGG)L 72 nt13.7□□□□□ -0.22
PXR1P53335 SUF7tP(UGG)M 72 nt13.7□□□□□ -0.22
PXR1P53335 tP(UGG)N1tP(UGG)N1 72 nt13.7□□□□□ -0.22
PXR1P53335 tP(UGG)N2tP(UGG)N2 72 nt13.7□□□□□ -0.22
PXR1P53335 tP(UGG)O1tP(UGG)O1 72 nt13.7□□□□□ -0.22
PXR1P53335 SUF11tP(UGG)O2 72 nt13.7□□□□□ -0.22
PXR1P53335 YOL085CYOL085C 342 nt13.58□□□□□ -0.24
PXR1P53335 POA1YBR022W 534 nt13.54□□□□□ -0.24
PXR1P53335 BDF1YLR399C 2061 nt13.52□□□□□ -0.24
PXR1P53335 BSC6YOL137W 1494 nt13.48□□□□□ -0.25
PXR1P53335 NVJ2YPR091C 2313 nt13.45□□□□□ -0.26
PXR1P53335 RPP1BYDL130W 321 nt13.44□□□□□ -0.26
PXR1P53335 ARE1YCR048W 1833 nt13.43□□□□□ -0.26
PXR1P53335 CCC1YLR220W 969 nt13.41□□□□□ -0.26
PXR1P53335 TAT1YBR069C 1860 nt13.31□□□□□ -0.28
PXR1P53335 PKP1YIL042C 1185 nt13.3□□□□□ -0.28
PXR1P53335 YHR049C-AYHR049C-A 297 nt13.29□□□□□ -0.28
PXR1P53335 RVS167YDR388W 1449 nt13.14□□□□□ -0.31
PXR1P53335 SCJ1YMR214W 1134 nt13.05□□□□□ -0.32
PXR1P53335 SAH1YER043C 1350 nt13.03□□□□□ -0.32
PXR1P53335 URN1YPR152C 1398 nt13□□□□□ -0.33
PXR1P53335 FPS1YLL043W 2010 nt12.99□□□□□ -0.33
PXR1P53335 BUD23YCR047C 828 nt12.88□□□□□ -0.35
PXR1P53335 tP(UGG)O3tP(UGG)O3 72 nt12.86□□□□□ -0.35
PXR1P53335 PET122YER153C 765 nt12.83□□□□□ -0.36
PXR1P53335 MEP2YNL142W 1500 nt12.78□□□□□ -0.36
PXR1P53335 OPI9YLR338W 858 nt12.77□□□□□ -0.37
PXR1P53335 SHR5YOL110W 714 nt12.68□□□□□ -0.38
PXR1P53335 SCR1SCR1 522 nt12.65□□□□□ -0.38
PXR1P53335 ATS1YAL020C 1002 nt12.62□□□□□ -0.39
PXR1P53335 DCW1YKL046C 1350 nt12.56□□□□□ -0.4
PXR1P53335 YBR220CYBR220C 1683 nt12.54□□□□□ -0.4
PXR1P53335 YDJ1YNL064C 1230 nt12.5□□□□□ -0.41
PXR1P53335 PTC2YER089C 1395 nt12.47□□□□□ -0.41
PXR1P53335 NAB2YGL122C 1578 nt12.46□□□□□ -0.42
PXR1P53335 UME6YDR207C 2511 nt12.43□□□□□ -0.42
PXR1P53335 PCH2YBR186W 1695 nt12.43□□□□□ -0.42
PXR1P53335 RRN5YLR141W 1092 nt12.43□□□□□ -0.42
PXR1P53335 GUT2YIL155C 1950 nt12.41□□□□□ -0.42
PXR1P53335 PUN1YLR414C 792 nt12.39□□□□□ -0.43
PXR1P53335 DEP1YAL013W 1218 nt12.38□□□□□ -0.43
PXR1P53335 YMR090WYMR090W 684 nt12.36□□□□□ -0.43
PXR1P53335 SSA1YAL005C 1929 nt12.35□□□□□ -0.43
PXR1P53335 EMI2YDR516C 1503 nt12.34□□□□□ -0.43
PXR1P53335 SEC11YIR022W 504 nt12.27□□□□□ -0.45
PXR1P53335 SDH1YKL148C 1923 nt12.23□□□□□ -0.45
PXR1P53335 RPN10YHR200W 807 nt12.23□□□□□ -0.45
PXR1P53335 YER088W-BYER088W-B 147 nt12.2□□□□□ -0.46
PXR1P53335 FIS1YIL065C 468 nt12.18□□□□□ -0.46
PXR1P53335 PIB2YGL023C 1908 nt12.16□□□□□ -0.46
PXR1P53335 YPS1YLR120C 1710 nt12.16□□□□□ -0.46
PXR1P53335 BOR1YNL275W 1731 nt12.15□□□□□ -0.46
PXR1P53335 YDL221WYDL221W 552 nt12.15□□□□□ -0.46
PXR1P53335 GAR1YHR089C 618 nt12.14□□□□□ -0.47
PXR1P53335 YNL208WYNL208W 600 nt12.14□□□□□ -0.47
PXR1P53335 YHR165W-AYHR165W-A 312 nt12.12□□□□□ -0.47
PXR1P53335 RSB1YOR049C 1065 nt12.1□□□□□ -0.47
PXR1P53335 DAL1YIR027C 1383 nt12.06□□□□□ -0.48
PXR1P53335 YJR018WYJR018W 363 nt12.04□□□□□ -0.48
PXR1P53335 FPR4YLR449W 1179 nt12.03□□□□□ -0.48
PXR1P53335 RTF1YGL244W 1677 nt11.99□□□□□ -0.49
PXR1P53335 MCH5YOR306C 1566 nt11.97□□□□□ -0.49
PXR1P53335 PHO4YFR034C 939 nt11.97□□□□□ -0.49
PXR1P53335 SCC4YER147C 1875 nt11.97□□□□□ -0.49
PXR1P53335 CAC2YML102W 1407 nt11.9□□□□□ -0.5
PXR1P53335 YDR095CYDR095C 411 nt11.89□□□□□ -0.51
PXR1P53335 YSC84YHR016C 1407 nt11.86□□□□□ -0.51
PXR1P53335 PTK1YKL198C 1989 nt11.81□□□□□ -0.52
PXR1P53335 TIR1YER011W 765 nt11.79□□□□□ -0.52
PXR1P53335 BOP3YNL042W 1191 nt11.78□□□□□ -0.52
PXR1P53335 PTP1YDL230W 1008 nt11.76□□□□□ -0.53
PXR1P53335 INM2YDR287W 879 nt11.76□□□□□ -0.53
PXR1P53335 YHL050CYHL050C 2094 nt11.75□□□□□ -0.53
PXR1P53335 PST2YDR032C 597 nt11.74□□□□□ -0.53
PXR1P53335 IRC15YPL017C 1500 nt11.73□□□□□ -0.53
PXR1P53335 GIS3YLR094C 1509 nt11.69□□□□□ -0.54
PXR1P53335 ALG12YNR030W 1656 nt11.68□□□□□ -0.54
PXR1P53335 RPP2AYOL039W 321 nt11.67□□□□□ -0.54
PXR1P53335 YJR120WYJR120W 351 nt11.64□□□□□ -0.55
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms