RNA–Protein interactions for RNA: YBR295W

PCA1, Transcript of Cadmium transporting P-type ATPase, yeastyeast

Gene PCA1, Length 3,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCA1YBR295W RQC2Q12532 1038 aaKnown RBP7.8□□□□□ -1.16
PCA1YBR295W BFR2Q06631 534 aaKnown RBP7.54□□□□□ -1.2
PCA1YBR295W URN1Q06525 465 aaKnown RBP6.81□□□□□ -1.32
PCA1YBR295W CAB3P36076 571 aa6.77□□□□□ -1.33
PCA1YBR295W NOP2P40991 618 aaKnown RBP6.77□□□□□ -1.33
PCA1YBR295W TAF7Q05021 590 aa6.77□□□□□ -1.33
PCA1YBR295W EBP2P36049 427 aaKnown RBP6.73□□□□□ -1.33
PCA1YBR295W SIS2P36024 562 aa6.66□□□□□ -1.34
PCA1YBR295W AVT3P36062 692 aa6.61□□□□□ -1.35
PCA1YBR295W YFR016CP43597 1233 aaKnown RBP6.53□□□□□ -1.36
PCA1YBR295W NSR1P27476 414 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
PCA1YBR295W YPR148CQ06523 435 aa6.43□□□□□ -1.38
PCA1YBR295W TFA1P36100 482 aa6.34□□□□□ -1.39
PCA1YBR295W RPS0BP46654 252 aaKnown RBP6.33□□□□□ -1.4
PCA1YBR295W CWC22P53333 577 aaKnown RBP6.32□□□□□ -1.4
PCA1YBR295W KRI1P42846 591 aaKnown RBP6.31□□□□□ -1.4
PCA1YBR295W DIP2Q12220 943 aaPredicted RBP6.3□□□□□ -1.4
PCA1YBR295W YRB30P53107 440 aaPredicted RBP6.21□□□□□ -1.41
PCA1YBR295W AIM44Q99299 758 aa6.21□□□□□ -1.42
PCA1YBR295W PSH1Q12161 406 aa6.17□□□□□ -1.42
PCA1YBR295W LEO1P38439 464 aa6.16□□□□□ -1.42
PCA1YBR295W NAP1P25293 417 aaKnown RBP6.15□□□□□ -1.43
PCA1YBR295W DEF1P35732 738 aaKnown RBP6.13□□□□□ -1.43
PCA1YBR295W IOC4Q04213 475 aa6.13□□□□□ -1.43
PCA1YBR295W MNN4P36044 1178 aa6.12□□□□□ -1.43
PCA1YBR295W ENV11P53246 860 aa6.12□□□□□ -1.43
PCA1YBR295W RSE1Q04693 1361 aaKnown RBP6.09□□□□□ -1.43
PCA1YBR295W RLP24Q07915 199 aaKnown RBP6.06□□□□□ -1.44
PCA1YBR295W TCB2P48231 1178 aa6.04□□□□□ -1.44
PCA1YBR295W RNA1P11745 407 aaKnown RBP6.01□□□□□ -1.45
PCA1YBR295W SPT21P35209 758 aa6□□□□□ -1.45
PCA1YBR295W SPT2P06843 333 aaPredicted RBP5.99□□□□□ -1.45
PCA1YBR295W DRS1P32892 752 aaKnown RBP5.99□□□□□ -1.45
PCA1YBR295W NUG1P40010 520 aaKnown RBP5.98□□□□□ -1.45
PCA1YBR295W FPR3P38911 411 aaKnown RBP5.97□□□□□ -1.45
PCA1YBR295W IFH1P39520 1085 aa5.95□□□□□ -1.46
PCA1YBR295W FPR4Q06205 392 aaPredicted RBP5.95□□□□□ -1.46
PCA1YBR295W SPT7P35177 1332 aa5.95□□□□□ -1.46
PCA1YBR295W FUN12P39730 1002 aaKnown RBP5.93□□□□□ -1.46
PCA1YBR295W YGR130CP53278 816 aa5.91□□□□□ -1.46
PCA1YBR295W SEC3P33332 1336 aaKnown RBP5.91□□□□□ -1.46
PCA1YBR295W SGS1P35187 1447 aa5.91□□□□□ -1.46
PCA1YBR295W CLC1P17891 233 aa5.9□□□□□ -1.47
PCA1YBR295W NOP53Q12080 455 aaKnown RBP5.89□□□□□ -1.47
PCA1YBR295W QCR6P00127 147 aa5.89□□□□□ -1.47
PCA1YBR295W SAS10Q12136 610 aaPredicted RBP5.88□□□□□ -1.47
PCA1YBR295W SNU71P53207 620 aaKnown RBP5.88□□□□□ -1.47
PCA1YBR295W GRX3Q03835 250 aa5.88□□□□□ -1.47
PCA1YBR295W ENP1P38333 483 aaKnown RBP5.86□□□□□ -1.47
PCA1YBR295W TOP1P04786 769 aa5.85□□□□□ -1.47
PCA1YBR295W SWE1P32944 819 aa5.85□□□□□ -1.47
PCA1YBR295W DOS2P54858 310 aa5.85□□□□□ -1.47
PCA1YBR295W RPN1P38764 993 aaKnown RBP5.84□□□□□ -1.48
PCA1YBR295W ORC1P54784 914 aaPredicted RBP5.83□□□□□ -1.48
PCA1YBR295W RLF2Q12495 606 aa5.83□□□□□ -1.48
PCA1YBR295W HSP82P02829 709 aaKnown RBP5.81□□□□□ -1.48
PCA1YBR295W MDG1P53885 366 aa5.8□□□□□ -1.48
PCA1YBR295W NMD2P38798 1089 aaKnown RBP5.79□□□□□ -1.48
PCA1YBR295W IME2P32581 645 aa5.79□□□□□ -1.48
PCA1YBR295W SPC110P32380 944 aa5.78□□□□□ -1.48
PCA1YBR295W YNL011CP53980 444 aa5.78□□□□□ -1.48
PCA1YBR295W TY1B-DR4Q07793 1604 aa5.77□□□□□ -1.49
PCA1YBR295W RIX1P38883 763 aaPredicted RBP5.77□□□□□ -1.49
PCA1YBR295W ETT1Q08421 412 aaKnown RBP5.77□□□□□ -1.49
PCA1YBR295W INO80P53115 1489 aa5.76□□□□□ -1.49
PCA1YBR295W EAF7P53911 425 aaKnown RBP5.76□□□□□ -1.49
PCA1YBR295W TOA1P32773 286 aa5.75□□□□□ -1.49
PCA1YBR295W SSA1P10591 642 aaKnown RBP5.75□□□□□ -1.49
PCA1YBR295W SSA2P10592 639 aaKnown RBP5.75□□□□□ -1.49
PCA1YBR295W RAD26P40352 1085 aa5.75□□□□□ -1.49
PCA1YBR295W SUB1P54000 292 aaKnown RBP5.75□□□□□ -1.49
PCA1YBR295W RPS0AP32905 252 aaKnown RBP5.74□□□□□ -1.49
PCA1YBR295W NNF2P53253 936 aa5.74□□□□□ -1.49
PCA1YBR295W PLP2Q12017 286 aa5.72□□□□□ -1.49
PCA1YBR295W MSH3P25336 1018 aa5.72□□□□□ -1.49
PCA1YBR295W ECM16Q04217 1267 aaKnown RBP5.72□□□□□ -1.49
PCA1YBR295W TIF4632P39936 914 aaKnown RBP5.71□□□□□ -1.49
PCA1YBR295W PIL1P53252 339 aaKnown RBP5.71□□□□□ -1.49
PCA1YBR295W YTA7P40340 1379 aa5.71□□□□□ -1.49
PCA1YBR295W MTC1P47018 478 aaKnown RBP5.71□□□□□ -1.5
PCA1YBR295W SKI3P17883 1432 aaKnown RBP5.7□□□□□ -1.5
PCA1YBR295W HIF1Q12373 385 aa5.7□□□□□ -1.5
PCA1YBR295W MSH4P40965 878 aaPredicted RBP5.7□□□□□ -1.5
PCA1YBR295W YSH1Q06224 779 aaPredicted RBP5.7□□□□□ -1.5
PCA1YBR295W TCB3Q03640 1545 aaKnown RBP5.69□□□□□ -1.5
PCA1YBR295W SPA2P23201 1466 aaKnown RBP5.69□□□□□ -1.5
PCA1YBR295W NHA1Q99271 985 aa5.69□□□□□ -1.5
PCA1YBR295W SSN2P38931 1420 aa5.69□□□□□ -1.5
PCA1YBR295W GIN4Q12263 1142 aa5.68□□□□□ -1.5
PCA1YBR295W MON2P48563 1636 aaPredicted RBP5.68□□□□□ -1.5
PCA1YBR295W PAF1P38351 445 aa5.67□□□□□ -1.5
PCA1YBR295W LEU3P08638 886 aa5.67□□□□□ -1.5
PCA1YBR295W PAP2P53632 584 aaKnown RBP5.67□□□□□ -1.5
PCA1YBR295W CTR9P89105 1077 aa5.66□□□□□ -1.5
PCA1YBR295W TLG1Q03322 224 aa5.66□□□□□ -1.5
PCA1YBR295W RPN7Q06103 429 aaKnown RBP5.66□□□□□ -1.5
PCA1YBR295W CLB5P30283 435 aa5.66□□□□□ -1.5
PCA1YBR295W VPS4P52917 437 aa5.66□□□□□ -1.5
PCA1YBR295W RRP14P36080 434 aaKnown RBP5.66□□□□□ -1.5
PCA1YBR295W LTV1P34078 463 aa5.65□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 132 ms