RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W MSP1P28737 362 aa6.09□□□□□ -1.43
PRE3YJL001W SRP101P32916 621 aa6.09□□□□□ -1.43
PRE3YJL001W SEF1P34228 1148 aa6.09□□□□□ -1.43
PRE3YJL001W YHR033WP38690 423 aa6.09□□□□□ -1.43
PRE3YJL001W CEP3P40969 608 aa6.09□□□□□ -1.43
PRE3YJL001W YJL107CP42947 387 aa6.09□□□□□ -1.43
PRE3YJL001W UBX6P47049 396 aa6.09□□□□□ -1.43
PRE3YJL001W RAI1P53063 387 aaKnown RBP6.09□□□□□ -1.43
PRE3YJL001W ZRG17P53735 605 aa6.09□□□□□ -1.43
PRE3YJL001W DIG1Q03063 452 aaKnown RBP6.09□□□□□ -1.43
PRE3YJL001W RLI1Q03195 608 aaKnown RBP6.09□□□□□ -1.43
PRE3YJL001W CCE1Q03702 353 aa6.09□□□□□ -1.43
PRE3YJL001W CDA2Q06703 312 aa6.09□□□□□ -1.43
PRE3YJL001W YCL002CP25565 263 aa6.08□□□□□ -1.44
PRE3YJL001W MSH1P25846 959 aa6.08□□□□□ -1.44
PRE3YJL001W SIN4P32259 974 aa6.08□□□□□ -1.44
PRE3YJL001W PET309P32522 965 aaPredicted RBP6.08□□□□□ -1.44
PRE3YJL001W LSM5P40089 93 aaKnown RBP6.08□□□□□ -1.44
PRE3YJL001W RLP7P40693 322 aaKnown RBP6.08□□□□□ -1.44
PRE3YJL001W IME4P41833 600 aa6.08□□□□□ -1.44
PRE3YJL001W MTQ2Q03920 221 aaPredicted RBP6.08□□□□□ -1.44
PRE3YJL001W LRS4Q04087 347 aaKnown RBP6.08□□□□□ -1.44
PRE3YJL001W NHX1Q04121 633 aa6.08□□□□□ -1.44
PRE3YJL001W ATG33Q06485 197 aa6.08□□□□□ -1.44
PRE3YJL001W DAS2Q12084 232 aa6.08□□□□□ -1.44
PRE3YJL001W HSP42Q12329 375 aa6.08□□□□□ -1.44
PRE3YJL001W RIB2Q12362 591 aaKnown RBP6.08□□□□□ -1.44
PRE3YJL001W DIF1O13577 133 aa6.07□□□□□ -1.44
PRE3YJL001W HOP1P20050 605 aa6.07□□□□□ -1.44
PRE3YJL001W PRP19P32523 503 aaKnown RBP6.07□□□□□ -1.44
PRE3YJL001W PRP18P33411 251 aaPredicted RBP6.07□□□□□ -1.44
PRE3YJL001W NTR2P36118 322 aaPredicted RBP6.07□□□□□ -1.44
PRE3YJL001W CHS7P38843 316 aa6.07□□□□□ -1.44
PRE3YJL001W MTG2P38860 518 aa6.07□□□□□ -1.44
PRE3YJL001W YHR182WP38870 785 aa6.07□□□□□ -1.44
PRE3YJL001W GPP1P41277 250 aaKnown RBP6.07□□□□□ -1.44
PRE3YJL001W YJR096WP47137 282 aa6.07□□□□□ -1.44
PRE3YJL001W YML6P51998 286 aa6.07□□□□□ -1.44
PRE3YJL001W YGL260WP53056 76 aa6.07□□□□□ -1.44
PRE3YJL001W YPR003CP53394 754 aa6.07□□□□□ -1.44
PRE3YJL001W EFM6P53970 246 aa6.07□□□□□ -1.44
PRE3YJL001W PEX25Q02969 394 aa6.07□□□□□ -1.44
PRE3YJL001W CTK1Q03957 528 aaKnown RBP6.07□□□□□ -1.44
PRE3YJL001W RRN11Q04712 507 aa6.07□□□□□ -1.44
PRE3YJL001W YPL272CQ08984 517 aa6.07□□□□□ -1.44
PRE3YJL001W DIN7Q12086 430 aa6.07□□□□□ -1.44
PRE3YJL001W YLR462WO13556 202 aa6.06□□□□□ -1.44
PRE3YJL001W MDM35O60200 86 aa6.06□□□□□ -1.44
PRE3YJL001W ILS1P09436 1072 aaKnown RBP6.06□□□□□ -1.44
PRE3YJL001W HMG1P12683 1054 aa6.06□□□□□ -1.44
PRE3YJL001W IMG1P25626 169 aa6.06□□□□□ -1.44
PRE3YJL001W HXT1P32465 570 aa6.06□□□□□ -1.44
PRE3YJL001W FMP46P36141 133 aaKnown RBP6.06□□□□□ -1.44
PRE3YJL001W MRPL10P36520 322 aa6.06□□□□□ -1.44
PRE3YJL001W YBP1P38315 674 aa6.06□□□□□ -1.44
PRE3YJL001W RCK2P38623 610 aa6.06□□□□□ -1.44
PRE3YJL001W YHL049CP38722 271 aa6.06□□□□□ -1.44
PRE3YJL001W CKB2P38930 258 aa6.06□□□□□ -1.44
PRE3YJL001W LCP5P40079 357 aaPredicted RBP6.06□□□□□ -1.44
PRE3YJL001W ALG8P40351 577 aa6.06□□□□□ -1.44
PRE3YJL001W SHR5P41912 237 aa6.06□□□□□ -1.44
PRE3YJL001W YFL064CP43540 174 aa6.06□□□□□ -1.44
PRE3YJL001W IKS1P47042 667 aa6.06□□□□□ -1.44
PRE3YJL001W ASK10P48361 1146 aa6.06□□□□□ -1.44
PRE3YJL001W KAP114P53067 1004 aa6.06□□□□□ -1.44
PRE3YJL001W YGR012WP53206 393 aa6.06□□□□□ -1.44
PRE3YJL001W YKR011CQ02209 353 aa6.06□□□□□ -1.44
PRE3YJL001W RRP45Q05636 305 aaKnown RBP6.06□□□□□ -1.44
PRE3YJL001W BLS1Q06071 122 aa6.06□□□□□ -1.44
PRE3YJL001W TMS1Q12116 473 aa6.06□□□□□ -1.44
PRE3YJL001W YBL111CQ3E7Y5 667 aa6.06□□□□□ -1.44
PRE3YJL001W HSH49Q99181 213 aaPredicted RBP6.06□□□□□ -1.44
PRE3YJL001W BCY1P07278 416 aaKnown RBP6.05□□□□□ -1.44
PRE3YJL001W FUM1P08417 488 aaKnown RBP6.05□□□□□ -1.44
PRE3YJL001W ENA1P13587 1091 aa6.05□□□□□ -1.44
PRE3YJL001W FUR1P18562 216 aaKnown RBP6.05□□□□□ -1.44
PRE3YJL001W HEM12P32347 362 aaPredicted RBP6.05□□□□□ -1.44
PRE3YJL001W CTP1P38152 299 aa6.05□□□□□ -1.44
PRE3YJL001W RKM3P38222 552 aa6.05□□□□□ -1.44
PRE3YJL001W TRM7P38238 310 aaKnown RBP6.05□□□□□ -1.44
PRE3YJL001W UBA4P38820 440 aa6.05□□□□□ -1.44
PRE3YJL001W ZRG8P40021 1076 aa6.05□□□□□ -1.44
PRE3YJL001W YJR120WP47157 116 aa6.05□□□□□ -1.44
PRE3YJL001W ENA2Q01896 1091 aa6.05□□□□□ -1.44
PRE3YJL001W TRS31Q03337 283 aa6.05□□□□□ -1.44
PRE3YJL001W SOV1Q04748 898 aa6.05□□□□□ -1.44
PRE3YJL001W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
PRE3YJL001W LDB17Q12342 491 aa6.05□□□□□ -1.44
PRE3YJL001W GTT2Q12390 233 aa6.05□□□□□ -1.44
PRE3YJL001W AVL9Q12500 764 aa6.05□□□□□ -1.44
PRE3YJL001W RMD5Q12508 421 aa6.05□□□□□ -1.44
PRE3YJL001W ENA5Q12691 1091 aa6.05□□□□□ -1.44
PRE3YJL001W YBR182C-AQ8TGU6 64 aa6.05□□□□□ -1.44
PRE3YJL001W TRP3P00937 484 aa6.04□□□□□ -1.44
PRE3YJL001W CMP2P14747 604 aa6.04□□□□□ -1.44
PRE3YJL001W AMD1P15274 810 aaKnown RBP6.04□□□□□ -1.44
PRE3YJL001W PRP2P20095 876 aaPredicted RBP6.04□□□□□ -1.44
PRE3YJL001W RAD57P25301 460 aa6.04□□□□□ -1.44
PRE3YJL001W NDI1P32340 513 aa6.04□□□□□ -1.44
PRE3YJL001W RPD3P32561 433 aa6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 313.9 ms