Protein–RNA interactions for Protein: P38238

TRM7, tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase, yeastyeast

Known RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRM7P38238 YML009W-BYML009W-B 477 nt19.89■□□□□ 0.77
TRM7P38238 NSR1YGR159C 1245 nt19.69■□□□□ 0.74
TRM7P38238 NOP1YDL014W 984 nt19.43■□□□□ 0.7
TRM7P38238 YKL036CYKL036C 393 nt18.01■□□□□ 0.47
TRM7P38238 MDJ1YFL016C 1536 nt17.3■□□□□ 0.36
TRM7P38238 Q0297Q0297 156 nt17.02■□□□□ 0.32
TRM7P38238 SRX1YKL086W 384 nt16.95■□□□□ 0.3
TRM7P38238 YJL027CYJL027C 417 nt16.84■□□□□ 0.29
TRM7P38238 SCS3YGL126W 1143 nt16.43■□□□□ 0.22
TRM7P38238 YCR051WYCR051W 669 nt16.09■□□□□ 0.17
TRM7P38238 YOL085CYOL085C 342 nt15.57■□□□□ 0.08
TRM7P38238 DBP2YNL112W 1641 nt15.35■□□□□ 0.05
TRM7P38238 PKP1YIL042C 1185 nt15.3■□□□□ 0.04
TRM7P38238 RPP1BYDL130W 321 nt15.27■□□□□ 0.04
TRM7P38238 TRN1tP(UGG)A 72 nt15.24■□□□□ 0.03
TRM7P38238 SUF9tP(UGG)F 72 nt15.24■□□□□ 0.03
TRM7P38238 SUF8tP(UGG)H 72 nt15.24■□□□□ 0.03
TRM7P38238 tP(UGG)LtP(UGG)L 72 nt15.24■□□□□ 0.03
TRM7P38238 SUF7tP(UGG)M 72 nt15.24■□□□□ 0.03
TRM7P38238 tP(UGG)N1tP(UGG)N1 72 nt15.24■□□□□ 0.03
TRM7P38238 tP(UGG)N2tP(UGG)N2 72 nt15.24■□□□□ 0.03
TRM7P38238 tP(UGG)O1tP(UGG)O1 72 nt15.24■□□□□ 0.03
TRM7P38238 SUF11tP(UGG)O2 72 nt15.24■□□□□ 0.03
TRM7P38238 CCC1YLR220W 969 nt15.08■□□□□ 0
TRM7P38238 YBR190WYBR190W 312 nt14.77□□□□□ -0.05
TRM7P38238 SCJ1YMR214W 1134 nt14.76□□□□□ -0.05
TRM7P38238 ATS1YAL020C 1002 nt14.74□□□□□ -0.05
TRM7P38238 PET122YER153C 765 nt14.55□□□□□ -0.08
TRM7P38238 RVS167YDR388W 1449 nt14.55□□□□□ -0.08
TRM7P38238 SCR1SCR1 522 nt14.49□□□□□ -0.09
TRM7P38238 tP(UGG)O3tP(UGG)O3 72 nt14.45□□□□□ -0.1
TRM7P38238 RTC3YHR087W 336 nt14.45□□□□□ -0.1
TRM7P38238 RRN5YLR141W 1092 nt14.15□□□□□ -0.14
TRM7P38238 SHR5YOL110W 714 nt14.04□□□□□ -0.16
TRM7P38238 YDJ1YNL064C 1230 nt14□□□□□ -0.17
TRM7P38238 RSB1YOR049C 1065 nt13.91□□□□□ -0.18
TRM7P38238 YER088W-BYER088W-B 147 nt13.87□□□□□ -0.19
TRM7P38238 GAR1YHR089C 618 nt13.65□□□□□ -0.22
TRM7P38238 PST2YDR032C 597 nt13.62□□□□□ -0.23
TRM7P38238 DEP1YAL013W 1218 nt13.56□□□□□ -0.24
TRM7P38238 URN1YPR152C 1398 nt13.56□□□□□ -0.24
TRM7P38238 RPN10YHR200W 807 nt13.44□□□□□ -0.26
TRM7P38238 YNL208WYNL208W 600 nt13.41□□□□□ -0.26
TRM7P38238 OPI9YLR338W 858 nt13.35□□□□□ -0.27
TRM7P38238 PUT4YOR348C 1884 nt13.28□□□□□ -0.28
TRM7P38238 SAH1YER043C 1350 nt13.2□□□□□ -0.3
TRM7P38238 TIR1YER011W 765 nt13.2□□□□□ -0.3
TRM7P38238 YKL097CYKL097C 411 nt13.17□□□□□ -0.3
TRM7P38238 ARE1YCR048W 1833 nt13.09□□□□□ -0.31
TRM7P38238 SHU1YHL006C 453 nt13.02□□□□□ -0.33
TRM7P38238 SSA1YAL005C 1929 nt12.99□□□□□ -0.33
TRM7P38238 PUN1YLR414C 792 nt12.98□□□□□ -0.33
TRM7P38238 YJR018WYJR018W 363 nt12.96□□□□□ -0.33
TRM7P38238 YHR049C-AYHR049C-A 297 nt12.91□□□□□ -0.34
TRM7P38238 POA1YBR022W 534 nt12.87□□□□□ -0.35
TRM7P38238 YAL037C-BYAL037C-B 975 nt12.77□□□□□ -0.37
TRM7P38238 PTC2YER089C 1395 nt12.77□□□□□ -0.37
TRM7P38238 RPP2BYDR382W 333 nt12.76□□□□□ -0.37
TRM7P38238 SRB2YHR041C 633 nt12.73□□□□□ -0.37
TRM7P38238 YJR120WYJR120W 351 nt12.72□□□□□ -0.37
TRM7P38238 BUD23YCR047C 828 nt12.64□□□□□ -0.39
TRM7P38238 YGR021WYGR021W 873 nt12.64□□□□□ -0.39
TRM7P38238 WWM1YFL010C 636 nt12.62□□□□□ -0.39
TRM7P38238 NAB2YGL122C 1578 nt12.61□□□□□ -0.39
TRM7P38238 YOR139CYOR139C 393 nt12.57□□□□□ -0.4
TRM7P38238 BSC6YOL137W 1494 nt12.57□□□□□ -0.4
TRM7P38238 HOM6YJR139C 1080 nt12.56□□□□□ -0.4
TRM7P38238 INM2YDR287W 879 nt12.5□□□□□ -0.41
TRM7P38238 NPL3YDR432W 1245 nt12.5□□□□□ -0.41
TRM7P38238 BDH2YAL061W 1254 nt12.5□□□□□ -0.41
TRM7P38238 MNP1YGL068W 585 nt12.49□□□□□ -0.41
TRM7P38238 DAL1YIR027C 1383 nt12.46□□□□□ -0.41
TRM7P38238 YFL021C-AYFL021C-A 855 nt12.45□□□□□ -0.42
TRM7P38238 FPR4YLR449W 1179 nt12.42□□□□□ -0.42
TRM7P38238 FIS1YIL065C 468 nt12.4□□□□□ -0.42
TRM7P38238 YOL037CYOL037C 354 nt12.39□□□□□ -0.43
TRM7P38238 SSA3YBL075C 1950 nt12.38□□□□□ -0.43
TRM7P38238 RKM5YLR137W 1104 nt12.38□□□□□ -0.43
TRM7P38238 LSM3YLR438C-A 270 nt12.38□□□□□ -0.43
TRM7P38238 YBL100CYBL100C 315 nt12.38□□□□□ -0.43
TRM7P38238 PHO4YFR034C 939 nt12.32□□□□□ -0.44
TRM7P38238 TRM9YML014W 840 nt12.26□□□□□ -0.45
TRM7P38238 FUN26YAL022C 1554 nt12.23□□□□□ -0.45
TRM7P38238 CCT6YDR188W 1641 nt12.11□□□□□ -0.47
TRM7P38238 tM(CAU)CtM(CAU)C 72 nt12.1□□□□□ -0.47
TRM7P38238 IMT4tM(CAU)E 72 nt12.1□□□□□ -0.47
TRM7P38238 IMT3tM(CAU)J3 72 nt12.1□□□□□ -0.47
TRM7P38238 IMT1tM(CAU)O1 72 nt12.1□□□□□ -0.47
TRM7P38238 IMT2tM(CAU)P 72 nt12.1□□□□□ -0.47
TRM7P38238 YLR281CYLR281C 468 nt12.06□□□□□ -0.48
TRM7P38238 ALF1YNL148C 765 nt12.06□□□□□ -0.48
TRM7P38238 YPS1YLR120C 1710 nt12.05□□□□□ -0.48
TRM7P38238 SUF2tP(AGG)C 72 nt12.04□□□□□ -0.48
TRM7P38238 SUF10tP(AGG)N 72 nt12.04□□□□□ -0.48
TRM7P38238 WHI5YOR083W 888 nt12□□□□□ -0.49
TRM7P38238 YDR095CYDR095C 411 nt11.99□□□□□ -0.49
TRM7P38238 PUS2YGL063W 1113 nt11.98□□□□□ -0.49
TRM7P38238 YHR165W-AYHR165W-A 312 nt11.91□□□□□ -0.5
TRM7P38238 YLR154C-GYLR154C-G 150 nt11.9□□□□□ -0.5
TRM7P38238 SPT5YML010W 3192 nt11.85□□□□□ -0.51
Retrieved 100 of 7,029 protein–RNA pairs in 58 ms