Protein–RNA interactions for Protein: P47042

IKS1, Probable serine/threonine-protein kinase IKS1, yeastyeast

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IKS1P47042 YML009W-BYML009W-B 477 nt18.85■□□□□ 0.61
IKS1P47042 NOP1YDL014W 984 nt18.52■□□□□ 0.56
IKS1P47042 NSR1YGR159C 1245 nt18.46■□□□□ 0.55
IKS1P47042 YKL036CYKL036C 393 nt17.45■□□□□ 0.38
IKS1P47042 Q0297Q0297 156 nt16.36■□□□□ 0.21
IKS1P47042 YJL027CYJL027C 417 nt16.34■□□□□ 0.21
IKS1P47042 SRX1YKL086W 384 nt16.19■□□□□ 0.18
IKS1P47042 SCS3YGL126W 1143 nt16.06■□□□□ 0.16
IKS1P47042 MDJ1YFL016C 1536 nt15.97■□□□□ 0.15
IKS1P47042 YCR051WYCR051W 669 nt15.36■□□□□ 0.05
IKS1P47042 YOL085CYOL085C 342 nt15.11■□□□□ 0.01
IKS1P47042 PKP1YIL042C 1185 nt14.79□□□□□ -0.04
IKS1P47042 SCJ1YMR214W 1134 nt14.76□□□□□ -0.05
IKS1P47042 RPP1BYDL130W 321 nt14.67□□□□□ -0.06
IKS1P47042 ATS1YAL020C 1002 nt14.48□□□□□ -0.09
IKS1P47042 TRN1tP(UGG)A 72 nt14.41□□□□□ -0.1
IKS1P47042 SUF9tP(UGG)F 72 nt14.41□□□□□ -0.1
IKS1P47042 SUF8tP(UGG)H 72 nt14.41□□□□□ -0.1
IKS1P47042 tP(UGG)LtP(UGG)L 72 nt14.41□□□□□ -0.1
IKS1P47042 SUF7tP(UGG)M 72 nt14.41□□□□□ -0.1
IKS1P47042 tP(UGG)N1tP(UGG)N1 72 nt14.41□□□□□ -0.1
IKS1P47042 tP(UGG)N2tP(UGG)N2 72 nt14.41□□□□□ -0.1
IKS1P47042 tP(UGG)O1tP(UGG)O1 72 nt14.41□□□□□ -0.1
IKS1P47042 SUF11tP(UGG)O2 72 nt14.41□□□□□ -0.1
IKS1P47042 DBP2YNL112W 1641 nt14.31□□□□□ -0.12
IKS1P47042 CCC1YLR220W 969 nt14.22□□□□□ -0.13
IKS1P47042 PET122YER153C 765 nt13.95□□□□□ -0.18
IKS1P47042 SCR1SCR1 522 nt13.91□□□□□ -0.18
IKS1P47042 tP(UGG)O3tP(UGG)O3 72 nt13.75□□□□□ -0.21
IKS1P47042 RRN5YLR141W 1092 nt13.59□□□□□ -0.23
IKS1P47042 YBR190WYBR190W 312 nt13.56□□□□□ -0.24
IKS1P47042 RVS167YDR388W 1449 nt13.54□□□□□ -0.24
IKS1P47042 RSB1YOR049C 1065 nt13.4□□□□□ -0.26
IKS1P47042 RTC3YHR087W 336 nt13.37□□□□□ -0.27
IKS1P47042 PST2YDR032C 597 nt13.36□□□□□ -0.27
IKS1P47042 YER088W-BYER088W-B 147 nt13.33□□□□□ -0.28
IKS1P47042 YDJ1YNL064C 1230 nt13.33□□□□□ -0.28
IKS1P47042 SHR5YOL110W 714 nt13.17□□□□□ -0.3
IKS1P47042 YKL097CYKL097C 411 nt13.01□□□□□ -0.33
IKS1P47042 GAR1YHR089C 618 nt12.92□□□□□ -0.34
IKS1P47042 SSA3YBL075C 1950 nt12.86□□□□□ -0.35
IKS1P47042 SHU1YHL006C 453 nt12.71□□□□□ -0.37
IKS1P47042 DEP1YAL013W 1218 nt12.63□□□□□ -0.39
IKS1P47042 URN1YPR152C 1398 nt12.55□□□□□ -0.4
IKS1P47042 YNL208WYNL208W 600 nt12.51□□□□□ -0.41
IKS1P47042 TIR1YER011W 765 nt12.49□□□□□ -0.41
IKS1P47042 RPN10YHR200W 807 nt12.47□□□□□ -0.41
IKS1P47042 YOR139CYOR139C 393 nt12.44□□□□□ -0.42
IKS1P47042 YAL037C-BYAL037C-B 975 nt12.37□□□□□ -0.43
IKS1P47042 OPI9YLR338W 858 nt12.32□□□□□ -0.44
IKS1P47042 PUT4YOR348C 1884 nt12.31□□□□□ -0.44
IKS1P47042 SSA1YAL005C 1929 nt12.25□□□□□ -0.45
IKS1P47042 NPL3YDR432W 1245 nt12.22□□□□□ -0.45
IKS1P47042 SRB2YHR041C 633 nt12.11□□□□□ -0.47
IKS1P47042 SAH1YER043C 1350 nt12.1□□□□□ -0.47
IKS1P47042 YGR021WYGR021W 873 nt12.07□□□□□ -0.48
IKS1P47042 HOM6YJR139C 1080 nt12.04□□□□□ -0.48
IKS1P47042 MNP1YGL068W 585 nt12.01□□□□□ -0.49
IKS1P47042 YJR018WYJR018W 363 nt12.01□□□□□ -0.49
IKS1P47042 YOL037CYOL037C 354 nt12□□□□□ -0.49
IKS1P47042 WWM1YFL010C 636 nt11.99□□□□□ -0.49
IKS1P47042 PUN1YLR414C 792 nt11.96□□□□□ -0.49
IKS1P47042 ARE1YCR048W 1833 nt11.95□□□□□ -0.5
IKS1P47042 tM(CAU)CtM(CAU)C 72 nt11.93□□□□□ -0.5
IKS1P47042 IMT4tM(CAU)E 72 nt11.93□□□□□ -0.5
IKS1P47042 IMT3tM(CAU)J3 72 nt11.93□□□□□ -0.5
IKS1P47042 IMT1tM(CAU)O1 72 nt11.93□□□□□ -0.5
IKS1P47042 IMT2tM(CAU)P 72 nt11.93□□□□□ -0.5
IKS1P47042 YJR120WYJR120W 351 nt11.92□□□□□ -0.5
IKS1P47042 RPP2BYDR382W 333 nt11.87□□□□□ -0.51
IKS1P47042 POA1YBR022W 534 nt11.87□□□□□ -0.51
IKS1P47042 RKM5YLR137W 1104 nt11.86□□□□□ -0.51
IKS1P47042 YFL021C-AYFL021C-A 855 nt11.82□□□□□ -0.52
IKS1P47042 YHR049C-AYHR049C-A 297 nt11.79□□□□□ -0.52
IKS1P47042 PTC2YER089C 1395 nt11.72□□□□□ -0.53
IKS1P47042 BSC6YOL137W 1494 nt11.71□□□□□ -0.53
IKS1P47042 BDH2YAL061W 1254 nt11.71□□□□□ -0.53
IKS1P47042 YLR281CYLR281C 468 nt11.69□□□□□ -0.54
IKS1P47042 PUS2YGL063W 1113 nt11.68□□□□□ -0.54
IKS1P47042 LSM3YLR438C-A 270 nt11.65□□□□□ -0.54
IKS1P47042 MOT3YMR070W 1473 nt11.61□□□□□ -0.55
IKS1P47042 SPT5YML010W 3192 nt11.59□□□□□ -0.55
IKS1P47042 WHI5YOR083W 888 nt11.58□□□□□ -0.56
IKS1P47042 INM2YDR287W 879 nt11.55□□□□□ -0.56
IKS1P47042 NAB2YGL122C 1578 nt11.52□□□□□ -0.57
IKS1P47042 YBL100CYBL100C 315 nt11.48□□□□□ -0.57
IKS1P47042 BUD23YCR047C 828 nt11.47□□□□□ -0.57
IKS1P47042 DAL1YIR027C 1383 nt11.45□□□□□ -0.58
IKS1P47042 SSA4YER103W 1929 nt11.45□□□□□ -0.58
IKS1P47042 TRM9YML014W 840 nt11.42□□□□□ -0.58
IKS1P47042 FIS1YIL065C 468 nt11.4□□□□□ -0.58
IKS1P47042 FPR4YLR449W 1179 nt11.39□□□□□ -0.59
IKS1P47042 FMP45YDL222C 930 nt11.38□□□□□ -0.59
IKS1P47042 DSK2YMR276W 1122 nt11.38□□□□□ -0.59
IKS1P47042 YPR011CYPR011C 981 nt11.38□□□□□ -0.59
IKS1P47042 IMP2'YIL154C 1041 nt11.36□□□□□ -0.59
IKS1P47042 FUN26YAL022C 1554 nt11.36□□□□□ -0.59
IKS1P47042 MRPL8YJL063C 717 nt11.34□□□□□ -0.59
IKS1P47042 PHO4YFR034C 939 nt11.33□□□□□ -0.6
IKS1P47042 YLR236CYLR236C 324 nt11.32□□□□□ -0.6
Retrieved 100 of 7,029 protein–RNA pairs in 9.7 ms