Protein–RNA interactions for Protein: Q03957

CTK1, CTD kinase subunit alpha, yeastyeast

Known RBP Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK1Q03957 YML009W-BYML009W-B 477 nt19.88■□□□□ 0.77
CTK1Q03957 NSR1YGR159C 1245 nt19.63■□□□□ 0.73
CTK1Q03957 NOP1YDL014W 984 nt19.29■□□□□ 0.68
CTK1Q03957 YKL036CYKL036C 393 nt17.94■□□□□ 0.46
CTK1Q03957 MDJ1YFL016C 1536 nt17.41■□□□□ 0.38
CTK1Q03957 Q0297Q0297 156 nt16.97■□□□□ 0.31
CTK1Q03957 SRX1YKL086W 384 nt16.9■□□□□ 0.3
CTK1Q03957 YJL027CYJL027C 417 nt16.77■□□□□ 0.28
CTK1Q03957 SCS3YGL126W 1143 nt16.42■□□□□ 0.22
CTK1Q03957 YCR051WYCR051W 669 nt16.05■□□□□ 0.16
CTK1Q03957 YOL085CYOL085C 342 nt15.57■□□□□ 0.08
CTK1Q03957 DBP2YNL112W 1641 nt15.46■□□□□ 0.06
CTK1Q03957 PKP1YIL042C 1185 nt15.35■□□□□ 0.05
CTK1Q03957 TRN1tP(UGG)A 72 nt15.26■□□□□ 0.03
CTK1Q03957 SUF9tP(UGG)F 72 nt15.26■□□□□ 0.03
CTK1Q03957 SUF8tP(UGG)H 72 nt15.26■□□□□ 0.03
CTK1Q03957 tP(UGG)LtP(UGG)L 72 nt15.26■□□□□ 0.03
CTK1Q03957 SUF7tP(UGG)M 72 nt15.26■□□□□ 0.03
CTK1Q03957 tP(UGG)N1tP(UGG)N1 72 nt15.26■□□□□ 0.03
CTK1Q03957 tP(UGG)N2tP(UGG)N2 72 nt15.26■□□□□ 0.03
CTK1Q03957 tP(UGG)O1tP(UGG)O1 72 nt15.26■□□□□ 0.03
CTK1Q03957 SUF11tP(UGG)O2 72 nt15.26■□□□□ 0.03
CTK1Q03957 RPP1BYDL130W 321 nt15.22■□□□□ 0.03
CTK1Q03957 CCC1YLR220W 969 nt15.09■□□□□ 0.01
CTK1Q03957 YBR190WYBR190W 312 nt14.75□□□□□ -0.05
CTK1Q03957 ATS1YAL020C 1002 nt14.7□□□□□ -0.06
CTK1Q03957 SCJ1YMR214W 1134 nt14.6□□□□□ -0.07
CTK1Q03957 PET122YER153C 765 nt14.58□□□□□ -0.08
CTK1Q03957 tP(UGG)O3tP(UGG)O3 72 nt14.46□□□□□ -0.09
CTK1Q03957 RVS167YDR388W 1449 nt14.44□□□□□ -0.1
CTK1Q03957 RTC3YHR087W 336 nt14.42□□□□□ -0.1
CTK1Q03957 SCR1SCR1 522 nt14.36□□□□□ -0.11
CTK1Q03957 RRN5YLR141W 1092 nt14.16□□□□□ -0.14
CTK1Q03957 SHR5YOL110W 714 nt14.01□□□□□ -0.17
CTK1Q03957 YDJ1YNL064C 1230 nt13.96□□□□□ -0.17
CTK1Q03957 YER088W-BYER088W-B 147 nt13.88□□□□□ -0.19
CTK1Q03957 RSB1YOR049C 1065 nt13.87□□□□□ -0.19
CTK1Q03957 GAR1YHR089C 618 nt13.67□□□□□ -0.22
CTK1Q03957 DEP1YAL013W 1218 nt13.62□□□□□ -0.23
CTK1Q03957 PST2YDR032C 597 nt13.61□□□□□ -0.23
CTK1Q03957 URN1YPR152C 1398 nt13.57□□□□□ -0.24
CTK1Q03957 SSA3YBL075C 1950 nt13.38□□□□□ -0.27
CTK1Q03957 PUT4YOR348C 1884 nt13.36□□□□□ -0.27
CTK1Q03957 YNL208WYNL208W 600 nt13.36□□□□□ -0.27
CTK1Q03957 OPI9YLR338W 858 nt13.34□□□□□ -0.27
CTK1Q03957 RPN10YHR200W 807 nt13.32□□□□□ -0.28
CTK1Q03957 SAH1YER043C 1350 nt13.26□□□□□ -0.29
CTK1Q03957 TIR1YER011W 765 nt13.19□□□□□ -0.3
CTK1Q03957 ARE1YCR048W 1833 nt13.16□□□□□ -0.3
CTK1Q03957 YKL097CYKL097C 411 nt13.09□□□□□ -0.31
CTK1Q03957 SHU1YHL006C 453 nt13.05□□□□□ -0.32
CTK1Q03957 SSA1YAL005C 1929 nt13.04□□□□□ -0.32
CTK1Q03957 YHR049C-AYHR049C-A 297 nt12.98□□□□□ -0.33
CTK1Q03957 POA1YBR022W 534 nt12.95□□□□□ -0.34
CTK1Q03957 YJR018WYJR018W 363 nt12.94□□□□□ -0.34
CTK1Q03957 PUN1YLR414C 792 nt12.94□□□□□ -0.34
CTK1Q03957 SRB2YHR041C 633 nt12.93□□□□□ -0.34
CTK1Q03957 YJR120WYJR120W 351 nt12.86□□□□□ -0.35
CTK1Q03957 YAL037C-BYAL037C-B 975 nt12.83□□□□□ -0.36
CTK1Q03957 PTC2YER089C 1395 nt12.79□□□□□ -0.36
CTK1Q03957 BUD23YCR047C 828 nt12.67□□□□□ -0.38
CTK1Q03957 RPP2BYDR382W 333 nt12.66□□□□□ -0.38
CTK1Q03957 BSC6YOL137W 1494 nt12.65□□□□□ -0.38
CTK1Q03957 WWM1YFL010C 636 nt12.65□□□□□ -0.38
CTK1Q03957 YOR139CYOR139C 393 nt12.62□□□□□ -0.39
CTK1Q03957 NAB2YGL122C 1578 nt12.57□□□□□ -0.4
CTK1Q03957 HOM6YJR139C 1080 nt12.57□□□□□ -0.4
CTK1Q03957 MNP1YGL068W 585 nt12.56□□□□□ -0.4
CTK1Q03957 YGR021WYGR021W 873 nt12.54□□□□□ -0.4
CTK1Q03957 FIS1YIL065C 468 nt12.48□□□□□ -0.41
CTK1Q03957 BDH2YAL061W 1254 nt12.46□□□□□ -0.41
CTK1Q03957 DAL1YIR027C 1383 nt12.45□□□□□ -0.42
CTK1Q03957 INM2YDR287W 879 nt12.43□□□□□ -0.42
CTK1Q03957 FPR4YLR449W 1179 nt12.42□□□□□ -0.42
CTK1Q03957 NPL3YDR432W 1245 nt12.41□□□□□ -0.42
CTK1Q03957 YFL021C-AYFL021C-A 855 nt12.4□□□□□ -0.42
CTK1Q03957 RKM5YLR137W 1104 nt12.38□□□□□ -0.43
CTK1Q03957 PHO4YFR034C 939 nt12.36□□□□□ -0.43
CTK1Q03957 YBL100CYBL100C 315 nt12.36□□□□□ -0.43
CTK1Q03957 YOL037CYOL037C 354 nt12.31□□□□□ -0.44
CTK1Q03957 LSM3YLR438C-A 270 nt12.3□□□□□ -0.44
CTK1Q03957 FUN26YAL022C 1554 nt12.23□□□□□ -0.45
CTK1Q03957 SPT5YML010W 3192 nt12.22□□□□□ -0.45
CTK1Q03957 TRM9YML014W 840 nt12.19□□□□□ -0.46
CTK1Q03957 Q0182Q0182 405 nt12.13□□□□□ -0.47
CTK1Q03957 tM(CAU)CtM(CAU)C 72 nt12.1□□□□□ -0.47
CTK1Q03957 IMT4tM(CAU)E 72 nt12.1□□□□□ -0.47
CTK1Q03957 IMT3tM(CAU)J3 72 nt12.1□□□□□ -0.47
CTK1Q03957 IMT1tM(CAU)O1 72 nt12.1□□□□□ -0.47
CTK1Q03957 IMT2tM(CAU)P 72 nt12.1□□□□□ -0.47
CTK1Q03957 CCT6YDR188W 1641 nt12.08□□□□□ -0.48
CTK1Q03957 YPS1YLR120C 1710 nt12.07□□□□□ -0.48
CTK1Q03957 SSA4YER103W 1929 nt12.07□□□□□ -0.48
CTK1Q03957 YLR281CYLR281C 468 nt12.04□□□□□ -0.48
CTK1Q03957 YDR095CYDR095C 411 nt12.02□□□□□ -0.49
CTK1Q03957 WHI5YOR083W 888 nt12□□□□□ -0.49
CTK1Q03957 ALF1YNL148C 765 nt11.99□□□□□ -0.49
CTK1Q03957 PUS2YGL063W 1113 nt11.96□□□□□ -0.49
CTK1Q03957 SUF2tP(AGG)C 72 nt11.93□□□□□ -0.5
CTK1Q03957 SUF10tP(AGG)N 72 nt11.93□□□□□ -0.5
Retrieved 100 of 7,029 protein–RNA pairs in 8.1 ms