Protein–RNA interactions for Protein: P33411

PRP18, Pre-mRNA-splicing factor 18, yeastyeast

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP18P33411 YML009W-BYML009W-B 477 nt20.31■□□□□ 0.84
PRP18P33411 NSR1YGR159C 1245 nt20.21■□□□□ 0.83
PRP18P33411 NOP1YDL014W 984 nt19.81■□□□□ 0.76
PRP18P33411 YKL036CYKL036C 393 nt18.28■□□□□ 0.52
PRP18P33411 MDJ1YFL016C 1536 nt17.85■□□□□ 0.45
PRP18P33411 Q0297Q0297 156 nt17.34■□□□□ 0.37
PRP18P33411 SRX1YKL086W 384 nt17.29■□□□□ 0.36
PRP18P33411 YJL027CYJL027C 417 nt17.06■□□□□ 0.32
PRP18P33411 SCS3YGL126W 1143 nt16.63■□□□□ 0.25
PRP18P33411 YCR051WYCR051W 669 nt16.39■□□□□ 0.21
PRP18P33411 DBP2YNL112W 1641 nt15.83■□□□□ 0.13
PRP18P33411 YOL085CYOL085C 342 nt15.83■□□□□ 0.12
PRP18P33411 TRN1tP(UGG)A 72 nt15.6■□□□□ 0.09
PRP18P33411 SUF9tP(UGG)F 72 nt15.6■□□□□ 0.09
PRP18P33411 SUF8tP(UGG)H 72 nt15.6■□□□□ 0.09
PRP18P33411 tP(UGG)LtP(UGG)L 72 nt15.6■□□□□ 0.09
PRP18P33411 SUF7tP(UGG)M 72 nt15.6■□□□□ 0.09
PRP18P33411 tP(UGG)N1tP(UGG)N1 72 nt15.6■□□□□ 0.09
PRP18P33411 tP(UGG)N2tP(UGG)N2 72 nt15.6■□□□□ 0.09
PRP18P33411 tP(UGG)O1tP(UGG)O1 72 nt15.6■□□□□ 0.09
PRP18P33411 SUF11tP(UGG)O2 72 nt15.6■□□□□ 0.09
PRP18P33411 RPP1BYDL130W 321 nt15.55■□□□□ 0.08
PRP18P33411 PKP1YIL042C 1185 nt15.55■□□□□ 0.08
PRP18P33411 CCC1YLR220W 969 nt15.43■□□□□ 0.06
PRP18P33411 YBR190WYBR190W 312 nt15.27■□□□□ 0.04
PRP18P33411 RVS167YDR388W 1449 nt14.92□□□□□ -0.02
PRP18P33411 RTC3YHR087W 336 nt14.91□□□□□ -0.02
PRP18P33411 ATS1YAL020C 1002 nt14.9□□□□□ -0.02
PRP18P33411 PET122YER153C 765 nt14.82□□□□□ -0.04
PRP18P33411 SCJ1YMR214W 1134 nt14.82□□□□□ -0.04
PRP18P33411 tP(UGG)O3tP(UGG)O3 72 nt14.78□□□□□ -0.04
PRP18P33411 SCR1SCR1 522 nt14.72□□□□□ -0.05
PRP18P33411 RRN5YLR141W 1092 nt14.42□□□□□ -0.1
PRP18P33411 SHR5YOL110W 714 nt14.4□□□□□ -0.1
PRP18P33411 YDJ1YNL064C 1230 nt14.31□□□□□ -0.12
PRP18P33411 YER088W-BYER088W-B 147 nt14.14□□□□□ -0.15
PRP18P33411 RSB1YOR049C 1065 nt14.12□□□□□ -0.15
PRP18P33411 URN1YPR152C 1398 nt13.96□□□□□ -0.17
PRP18P33411 GAR1YHR089C 618 nt13.96□□□□□ -0.17
PRP18P33411 DEP1YAL013W 1218 nt13.94□□□□□ -0.18
PRP18P33411 PUT4YOR348C 1884 nt13.82□□□□□ -0.2
PRP18P33411 PST2YDR032C 597 nt13.8□□□□□ -0.2
PRP18P33411 RPN10YHR200W 807 nt13.8□□□□□ -0.2
PRP18P33411 OPI9YLR338W 858 nt13.77□□□□□ -0.21
PRP18P33411 YNL208WYNL208W 600 nt13.77□□□□□ -0.21
PRP18P33411 SAH1YER043C 1350 nt13.65□□□□□ -0.22
PRP18P33411 ARE1YCR048W 1833 nt13.58□□□□□ -0.24
PRP18P33411 TIR1YER011W 765 nt13.51□□□□□ -0.25
PRP18P33411 YHR049C-AYHR049C-A 297 nt13.38□□□□□ -0.27
PRP18P33411 PUN1YLR414C 792 nt13.38□□□□□ -0.27
PRP18P33411 POA1YBR022W 534 nt13.38□□□□□ -0.27
PRP18P33411 YJR018WYJR018W 363 nt13.34□□□□□ -0.27
PRP18P33411 SSA1YAL005C 1929 nt13.32□□□□□ -0.28
PRP18P33411 YKL097CYKL097C 411 nt13.26□□□□□ -0.29
PRP18P33411 SHU1YHL006C 453 nt13.21□□□□□ -0.29
PRP18P33411 PTC2YER089C 1395 nt13.2□□□□□ -0.3
PRP18P33411 YJR120WYJR120W 351 nt13.1□□□□□ -0.31
PRP18P33411 RPP2BYDR382W 333 nt13.09□□□□□ -0.31
PRP18P33411 BUD23YCR047C 828 nt13.08□□□□□ -0.32
PRP18P33411 BSC6YOL137W 1494 nt13.08□□□□□ -0.32
PRP18P33411 SRB2YHR041C 633 nt13.07□□□□□ -0.32
PRP18P33411 NAB2YGL122C 1578 nt13.03□□□□□ -0.32
PRP18P33411 YAL037C-BYAL037C-B 975 nt12.98□□□□□ -0.33
PRP18P33411 WWM1YFL010C 636 nt12.9□□□□□ -0.34
PRP18P33411 INM2YDR287W 879 nt12.88□□□□□ -0.35
PRP18P33411 DAL1YIR027C 1383 nt12.86□□□□□ -0.35
PRP18P33411 YGR021WYGR021W 873 nt12.86□□□□□ -0.35
PRP18P33411 BDH2YAL061W 1254 nt12.83□□□□□ -0.36
PRP18P33411 SSA3YBL075C 1950 nt12.83□□□□□ -0.36
PRP18P33411 FIS1YIL065C 468 nt12.82□□□□□ -0.36
PRP18P33411 FPR4YLR449W 1179 nt12.81□□□□□ -0.36
PRP18P33411 HOM6YJR139C 1080 nt12.8□□□□□ -0.36
PRP18P33411 YBL100CYBL100C 315 nt12.73□□□□□ -0.37
PRP18P33411 PHO4YFR034C 939 nt12.72□□□□□ -0.37
PRP18P33411 YFL021C-AYFL021C-A 855 nt12.71□□□□□ -0.37
PRP18P33411 MNP1YGL068W 585 nt12.71□□□□□ -0.37
PRP18P33411 YOR139CYOR139C 393 nt12.7□□□□□ -0.38
PRP18P33411 LSM3YLR438C-A 270 nt12.69□□□□□ -0.38
PRP18P33411 NPL3YDR432W 1245 nt12.61□□□□□ -0.39
PRP18P33411 RKM5YLR137W 1104 nt12.61□□□□□ -0.39
PRP18P33411 TRM9YML014W 840 nt12.59□□□□□ -0.39
PRP18P33411 FUN26YAL022C 1554 nt12.59□□□□□ -0.39
PRP18P33411 YOL037CYOL037C 354 nt12.56□□□□□ -0.4
PRP18P33411 YPS1YLR120C 1710 nt12.48□□□□□ -0.41
PRP18P33411 CCT6YDR188W 1641 nt12.46□□□□□ -0.41
PRP18P33411 SPT5YML010W 3192 nt12.46□□□□□ -0.42
PRP18P33411 ALF1YNL148C 765 nt12.41□□□□□ -0.42
PRP18P33411 YDR095CYDR095C 411 nt12.4□□□□□ -0.42
PRP18P33411 SUF2tP(AGG)C 72 nt12.36□□□□□ -0.43
PRP18P33411 SUF10tP(AGG)N 72 nt12.36□□□□□ -0.43
PRP18P33411 YHR165W-AYHR165W-A 312 nt12.33□□□□□ -0.44
PRP18P33411 MEP2YNL142W 1500 nt12.28□□□□□ -0.44
PRP18P33411 YLR281CYLR281C 468 nt12.26□□□□□ -0.45
PRP18P33411 tM(CAU)CtM(CAU)C 72 nt12.23□□□□□ -0.45
PRP18P33411 IMT4tM(CAU)E 72 nt12.23□□□□□ -0.45
PRP18P33411 IMT3tM(CAU)J3 72 nt12.23□□□□□ -0.45
PRP18P33411 IMT1tM(CAU)O1 72 nt12.23□□□□□ -0.45
PRP18P33411 IMT2tM(CAU)P 72 nt12.23□□□□□ -0.45
PRP18P33411 SIS1YNL007C 1059 nt12.23□□□□□ -0.45
PRP18P33411 WHI5YOR083W 888 nt12.21□□□□□ -0.45
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms