RNA–Protein interactions for RNA: YBR186W

PCH2, Transcript of Hexameric ring ATPase that remodels chromosome axis protein Hop1p, yeast

Gene PCH2, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCH2	YBR186W	DOM34	P33309	386 aa		11.75	□□□□□ -0.53
PCH2	YBR186W	OCT1	P35999	772 aa		11.75	□□□□□ -0.53
PCH2	YBR186W	YPK3	P38070	525 aa		11.75	□□□□□ -0.53
PCH2	YBR186W	YBR139W	P38109	508 aa		11.75	□□□□□ -0.53
PCH2	YBR186W	YBL029W	P38201	376 aa		11.75	□□□□□ -0.53
PCH2	YBR186W	IST2	P38250	946 aa		11.75	□□□□□ -0.53
PCH2	YBR186W	PPE1	P38796	400 aa		11.75	□□□□□ -0.53
PCH2	YBR186W	YGR117C	P53270	476 aa		11.75	□□□□□ -0.53
PCH2	YBR186W	LSM3	P57743	89 aa	Known RBP	11.75	□□□□□ -0.53
PCH2	YBR186W	TIM11	P81449	96 aa	Predicted RBP	11.75	□□□□□ -0.53
PCH2	YBR186W	SOG2	Q08817	791 aa		11.75	□□□□□ -0.53
PCH2	YBR186W	SPE3	Q12074	293 aa	Known RBP	11.75	□□□□□ -0.53
PCH2	YBR186W	ATG34	Q12292	412 aa		11.75	□□□□□ -0.53
PCH2	YBR186W	CSR2	Q12734	1121 aa		11.75	□□□□□ -0.53
PCH2	YBR186W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	11.74	□□□□□ -0.53	not detected
PCH2	YBR186W	ATP12	P22135	325 aa		11.74	□□□□□ -0.53
PCH2	YBR186W	UBA1	P22515	1024 aa	Known RBP	11.74	□□□□□ -0.53
PCH2	YBR186W	GLN1	P32288	370 aa	Known RBP	11.74	□□□□□ -0.53
PCH2	YBR186W	DAL1	P32375	460 aa		11.74	□□□□□ -0.53
PCH2	YBR186W	IXR1	P33417	597 aa		11.74	□□□□□ -0.53
PCH2	YBR186W	PTH2	P34222	208 aa		11.74	□□□□□ -0.53
PCH2	YBR186W	SKG1	P36169	355 aa		11.74	□□□□□ -0.53
PCH2	YBR186W	YBR241C	P38142	488 aa		11.74	□□□□□ -0.53
PCH2	YBR186W	RIM11	P38615	370 aa		11.74	□□□□□ -0.53
PCH2	YBR186W	VMA22	P38784	181 aa		11.74	□□□□□ -0.53
PCH2	YBR186W	YHB1	P39676	399 aa	Known RBP	11.74	□□□□□ -0.53
PCH2	YBR186W	MNN11	P46985	422 aa	Known RBP	11.74	□□□□□ -0.53
PCH2	YBR186W	PSP2	P50109	593 aa	Known RBP	11.74	□□□□□ -0.53
PCH2	YBR186W	IMA1	P53051	589 aa		11.74	□□□□□ -0.53
PCH2	YBR186W	YNL095C	P53932	642 aa		11.74	□□□□□ -0.53
PCH2	YBR186W	ADE12	P80210	433 aa	Known RBP	11.74	□□□□□ -0.53
PCH2	YBR186W	ECM9	Q02202	377 aa		11.74	□□□□□ -0.53
PCH2	YBR186W	REH1	Q06709	432 aa		11.74	□□□□□ -0.53
PCH2	YBR186W	NOP12	Q08208	459 aa	Known RBP	11.74	□□□□□ -0.53
PCH2	YBR186W	SGT1	Q08446	395 aa		11.74	□□□□□ -0.53
PCH2	YBR186W	UIP4	Q08926	304 aa		11.74	□□□□□ -0.53
PCH2	YBR186W	HFI1	Q12060	488 aa		11.74	□□□□□ -0.53
PCH2	YBR186W	EFG1	Q3E705	233 aa	Known RBP	11.74	□□□□□ -0.53
PCH2	YBR186W	APM4	Q99186	491 aa		11.74	□□□□□ -0.53
PCH2	YBR186W	LAA1	P39526	2014 aa		11.73	□□□□□ -0.53
PCH2	YBR186W	UGA1	P17649	471 aa		11.73	□□□□□ -0.53
PCH2	YBR186W	ART10	P18634	518 aa	Known RBP	11.73	□□□□□ -0.53
PCH2	YBR186W	NDI1	P32340	513 aa		11.73	□□□□□ -0.53
PCH2	YBR186W	AIM26	P32858	118 aa		11.73	□□□□□ -0.53
PCH2	YBR186W	GUA1	P38625	525 aa	Known RBP	11.73	□□□□□ -0.53
PCH2	YBR186W	YHR054C	P38780	354 aa		11.73	□□□□□ -0.53
PCH2	YBR186W	RSC30	P38781	883 aa		11.73	□□□□□ -0.53
PCH2	YBR186W	DSS1	P39112	969 aa		11.73	□□□□□ -0.53
PCH2	YBR186W	VMA13	P41807	478 aa	Known RBP	11.73	□□□□□ -0.53
PCH2	YBR186W	RPS7B	P48164	190 aa	Known RBP	11.73	□□□□□ -0.53
PCH2	YBR186W	YMR099C	Q03161	297 aa	Known RBP	11.73	□□□□□ -0.53
PCH2	YBR186W	SCM3	Q12334	223 aa		11.73	□□□□□ -0.53
PCH2	YBR186W	UBR2	Q07963	1872 aa		11.72	□□□□□ -0.53
PCH2	YBR186W	ERG20	P08524	352 aa	Known RBP	11.72	□□□□□ -0.53
PCH2	YBR186W	VPS3	P23643	1011 aa		11.72	□□□□□ -0.53
PCH2	YBR186W	YDJ1	P25491	409 aa	Known RBP	11.72	□□□□□ -0.53
PCH2	YBR186W	NUP2	P32499	720 aa		11.72	□□□□□ -0.53
PCH2	YBR186W	THO1	P40040	218 aa	Known RBP	11.72	□□□□□ -0.53
PCH2	YBR186W	IMA5	P40884	581 aa		11.72	□□□□□ -0.53
PCH2	YBR186W	JJJ3	P47138	172 aa		11.72	□□□□□ -0.53
PCH2	YBR186W	RSN1	Q03516	953 aa		11.72	□□□□□ -0.53
PCH2	YBR186W	ATG20	Q07528	640 aa		11.72	□□□□□ -0.53
PCH2	YBR186W	DTD1	Q07648	150 aa	Known RBP	11.72	□□□□□ -0.53
PCH2	YBR186W	NTG2	Q08214	380 aa		11.72	□□□□□ -0.53
PCH2	YBR186W	RKM1	Q08961	583 aa	Predicted RBP	11.72	□□□□□ -0.53
PCH2	YBR186W	RPN13	O13563	156 aa		11.71	□□□□□ -0.53
PCH2	YBR186W	GLC3	P32775	704 aa		11.71	□□□□□ -0.53
PCH2	YBR186W	SRP68	P38687	599 aa	Known RBP	11.71	□□□□□ -0.53
PCH2	YBR186W	VPS29	P38759	282 aa		11.71	□□□□□ -0.53
PCH2	YBR186W	VAB2	P40003	282 aa		11.71	□□□□□ -0.53
PCH2	YBR186W	PSP1	P50896	841 aa	Known RBP	11.71	□□□□□ -0.53
PCH2	YBR186W	CWC21	Q03375	135 aa	Known RBP	11.71	□□□□□ -0.53
PCH2	YBR186W	NHX1	Q04121	633 aa		11.71	□□□□□ -0.53
PCH2	YBR186W	ARP9	Q05123	467 aa		11.71	□□□□□ -0.53
PCH2	YBR186W	FMP45	Q07651	309 aa		11.71	□□□□□ -0.53
PCH2	YBR186W	CDC19	P00549	500 aa	Known RBP	11.71	□□□□□ -0.54
PCH2	YBR186W	TRP3	P00937	484 aa		11.71	□□□□□ -0.54
PCH2	YBR186W	DMC1	P25453	334 aa		11.71	□□□□□ -0.54
PCH2	YBR186W	SRP101	P32916	621 aa		11.71	□□□□□ -0.54
PCH2	YBR186W	AGP2	P38090	596 aa		11.71	□□□□□ -0.54
PCH2	YBR186W	YHL012W	P38709	493 aa		11.71	□□□□□ -0.54
PCH2	YBR186W	AST2	P39945	430 aa	Known RBP	11.71	□□□□□ -0.54
PCH2	YBR186W	YJL070C	P40361	888 aa		11.71	□□□□□ -0.54
PCH2	YBR186W	PFD1	P46988	109 aa		11.71	□□□□□ -0.54
PCH2	YBR186W	DIA3	P52290	468 aa		11.71	□□□□□ -0.54
PCH2	YBR186W	MON1	P53129	644 aa		11.71	□□□□□ -0.54
PCH2	YBR186W	HXT15	P54854	567 aa		11.71	□□□□□ -0.54
PCH2	YBR186W	URC2	Q04411	772 aa		11.71	□□□□□ -0.54
PCH2	YBR186W	CDD1	Q06549	142 aa		11.71	□□□□□ -0.54
PCH2	YBR186W	ECM30	Q06673	1274 aa		11.71	□□□□□ -0.54
PCH2	YBR186W	YOL159C	Q08300	171 aa		11.71	□□□□□ -0.54
PCH2	YBR186W	SGO1	Q08490	590 aa		11.71	□□□□□ -0.54
PCH2	YBR186W	SAM3	Q08986	587 aa		11.71	□□□□□ -0.54
PCH2	YBR186W	LRE1	P25579	583 aa	Known RBP	11.7	□□□□□ -0.54
PCH2	YBR186W	YCR090C	P25654	182 aa	Known RBP	11.7	□□□□□ -0.54
PCH2	YBR186W	PHO91	P27514	894 aa		11.7	□□□□□ -0.54
PCH2	YBR186W	YHR112C	P38716	378 aa		11.7	□□□□□ -0.54
PCH2	YBR186W	KRE29	P40026	464 aa		11.7	□□□□□ -0.54
PCH2	YBR186W	ATM1	P40416	690 aa		11.7	□□□□□ -0.54
PCH2	YBR186W	ALT2	P52892	507 aa		11.7	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms