Protein–RNA interactions for Protein: O13563

RPN13, 26S proteasome regulatory subunit RPN13, yeastyeast

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN13O13563 NSR1YGR159C 1245 nt18.02■□□□□ 0.48
RPN13O13563 YML009W-BYML009W-B 477 nt17.44■□□□□ 0.38
RPN13O13563 MDJ1YFL016C 1536 nt16.67■□□□□ 0.26
RPN13O13563 NOP1YDL014W 984 nt16.66■□□□□ 0.26
RPN13O13563 YJL027CYJL027C 417 nt15.29■□□□□ 0.04
RPN13O13563 YKL036CYKL036C 393 nt14.7□□□□□ -0.06
RPN13O13563 SSA3YBL075C 1950 nt14.65□□□□□ -0.06
RPN13O13563 SRX1YKL086W 384 nt14.58□□□□□ -0.08
RPN13O13563 DBP2YNL112W 1641 nt14.52□□□□□ -0.09
RPN13O13563 YBR190WYBR190W 312 nt14.43□□□□□ -0.1
RPN13O13563 Q0297Q0297 156 nt14.39□□□□□ -0.11
RPN13O13563 RTC3YHR087W 336 nt14.01□□□□□ -0.17
RPN13O13563 YCR051WYCR051W 669 nt13.74□□□□□ -0.21
RPN13O13563 PUT4YOR348C 1884 nt13.7□□□□□ -0.22
RPN13O13563 TRN1tP(UGG)A 72 nt13.62□□□□□ -0.23
RPN13O13563 SUF9tP(UGG)F 72 nt13.62□□□□□ -0.23
RPN13O13563 SUF8tP(UGG)H 72 nt13.62□□□□□ -0.23
RPN13O13563 tP(UGG)LtP(UGG)L 72 nt13.62□□□□□ -0.23
RPN13O13563 SUF7tP(UGG)M 72 nt13.62□□□□□ -0.23
RPN13O13563 tP(UGG)N1tP(UGG)N1 72 nt13.62□□□□□ -0.23
RPN13O13563 tP(UGG)N2tP(UGG)N2 72 nt13.62□□□□□ -0.23
RPN13O13563 tP(UGG)O1tP(UGG)O1 72 nt13.62□□□□□ -0.23
RPN13O13563 SUF11tP(UGG)O2 72 nt13.62□□□□□ -0.23
RPN13O13563 CCC1YLR220W 969 nt13.45□□□□□ -0.26
RPN13O13563 RVS167YDR388W 1449 nt13.39□□□□□ -0.27
RPN13O13563 ARE1YCR048W 1833 nt13.23□□□□□ -0.29
RPN13O13563 SCJ1YMR214W 1134 nt13.22□□□□□ -0.29
RPN13O13563 POA1YBR022W 534 nt13.17□□□□□ -0.3
RPN13O13563 SPT5YML010W 3192 nt13.12□□□□□ -0.31
RPN13O13563 BSC6YOL137W 1494 nt13.04□□□□□ -0.32
RPN13O13563 SCS3YGL126W 1143 nt13.01□□□□□ -0.33
RPN13O13563 YHR049C-AYHR049C-A 297 nt13□□□□□ -0.33
RPN13O13563 SAH1YER043C 1350 nt12.96□□□□□ -0.33
RPN13O13563 SSA4YER103W 1929 nt12.93□□□□□ -0.34
RPN13O13563 RPP1BYDL130W 321 nt12.9□□□□□ -0.34
RPN13O13563 URN1YPR152C 1398 nt12.88□□□□□ -0.35
RPN13O13563 OPI9YLR338W 858 nt12.86□□□□□ -0.35
RPN13O13563 YOL085CYOL085C 342 nt12.78□□□□□ -0.36
RPN13O13563 SHR5YOL110W 714 nt12.78□□□□□ -0.36
RPN13O13563 PKP1YIL042C 1185 nt12.65□□□□□ -0.38
RPN13O13563 DEP1YAL013W 1218 nt12.65□□□□□ -0.38
RPN13O13563 tP(UGG)O3tP(UGG)O3 72 nt12.64□□□□□ -0.39
RPN13O13563 BUD23YCR047C 828 nt12.62□□□□□ -0.39
RPN13O13563 BDF1YLR399C 2061 nt12.57□□□□□ -0.4
RPN13O13563 RPN10YHR200W 807 nt12.48□□□□□ -0.41
RPN13O13563 PTC2YER089C 1395 nt12.44□□□□□ -0.42
RPN13O13563 PUN1YLR414C 792 nt12.44□□□□□ -0.42
RPN13O13563 PET122YER153C 765 nt12.41□□□□□ -0.42
RPN13O13563 NAB2YGL122C 1578 nt12.39□□□□□ -0.43
RPN13O13563 YNL208WYNL208W 600 nt12.38□□□□□ -0.43
RPN13O13563 TAT1YBR069C 1860 nt12.36□□□□□ -0.43
RPN13O13563 MEP2YNL142W 1500 nt12.33□□□□□ -0.44
RPN13O13563 YDJ1YNL064C 1230 nt12.25□□□□□ -0.45
RPN13O13563 YJR018WYJR018W 363 nt12.24□□□□□ -0.45
RPN13O13563 FIS1YIL065C 468 nt12.14□□□□□ -0.47
RPN13O13563 DCW1YKL046C 1350 nt12.12□□□□□ -0.47
RPN13O13563 PAC11YDR488C 1602 nt12.11□□□□□ -0.47
RPN13O13563 DAL1YIR027C 1383 nt12.07□□□□□ -0.48
RPN13O13563 GAR1YHR089C 618 nt12.06□□□□□ -0.48
RPN13O13563 SCR1SCR1 522 nt12.04□□□□□ -0.48
RPN13O13563 YPS1YLR120C 1710 nt12.03□□□□□ -0.48
RPN13O13563 FPR4YLR449W 1179 nt11.99□□□□□ -0.49
RPN13O13563 YBR220CYBR220C 1683 nt11.99□□□□□ -0.49
RPN13O13563 RRN5YLR141W 1092 nt11.98□□□□□ -0.49
RPN13O13563 PHO4YFR034C 939 nt11.96□□□□□ -0.49
RPN13O13563 YJR120WYJR120W 351 nt11.95□□□□□ -0.5
RPN13O13563 EMI2YDR516C 1503 nt11.92□□□□□ -0.5
RPN13O13563 INM2YDR287W 879 nt11.9□□□□□ -0.5
RPN13O13563 YHR165W-AYHR165W-A 312 nt11.88□□□□□ -0.51
RPN13O13563 YMR090WYMR090W 684 nt11.87□□□□□ -0.51
RPN13O13563 YDR095CYDR095C 411 nt11.81□□□□□ -0.52
RPN13O13563 NVJ2YPR091C 2313 nt11.81□□□□□ -0.52
RPN13O13563 SDH1YKL148C 1923 nt11.79□□□□□ -0.52
RPN13O13563 YDL221WYDL221W 552 nt11.77□□□□□ -0.53
RPN13O13563 RPP2BYDR382W 333 nt11.76□□□□□ -0.53
RPN13O13563 YER088W-BYER088W-B 147 nt11.75□□□□□ -0.53
RPN13O13563 SSA1YAL005C 1929 nt11.75□□□□□ -0.53
RPN13O13563 PCH2YBR186W 1695 nt11.71□□□□□ -0.53
RPN13O13563 TIR1YER011W 765 nt11.71□□□□□ -0.53
RPN13O13563 CAC2YML102W 1407 nt11.7□□□□□ -0.54
RPN13O13563 GUT2YIL155C 1950 nt11.7□□□□□ -0.54
RPN13O13563 PTP1YDL230W 1008 nt11.67□□□□□ -0.54
RPN13O13563 YBL100CYBL100C 315 nt11.66□□□□□ -0.54
RPN13O13563 SEC11YIR022W 504 nt11.62□□□□□ -0.55
RPN13O13563 SCC4YER147C 1875 nt11.59□□□□□ -0.55
RPN13O13563 RPP2AYOL039W 321 nt11.58□□□□□ -0.56
RPN13O13563 PIB2YGL023C 1908 nt11.56□□□□□ -0.56
RPN13O13563 IRC15YPL017C 1500 nt11.53□□□□□ -0.56
RPN13O13563 FUN26YAL022C 1554 nt11.51□□□□□ -0.57
RPN13O13563 RSB1YOR049C 1065 nt11.47□□□□□ -0.57
RPN13O13563 GIS3YLR094C 1509 nt11.46□□□□□ -0.57
RPN13O13563 ALF1YNL148C 765 nt11.45□□□□□ -0.58
RPN13O13563 ATS1YAL020C 1002 nt11.44□□□□□ -0.58
RPN13O13563 BDH2YAL061W 1254 nt11.44□□□□□ -0.58
RPN13O13563 SRB2YHR041C 633 nt11.43□□□□□ -0.58
RPN13O13563 YSC84YHR016C 1407 nt11.41□□□□□ -0.58
RPN13O13563 YHL050CYHL050C 2094 nt11.37□□□□□ -0.59
RPN13O13563 SIS1YNL007C 1059 nt11.36□□□□□ -0.59
RPN13O13563 RTF1YGL244W 1677 nt11.35□□□□□ -0.59
RPN13O13563 TRM9YML014W 840 nt11.34□□□□□ -0.59
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms