Protein–RNA interactions for Protein: Q08961

RKM1, Ribosomal lysine N-methyltransferase 1, yeastyeast

Predicted RBP Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKM1Q08961 NSR1YGR159C 1245 nt18.29■□□□□ 0.52
RKM1Q08961 YML009W-BYML009W-B 477 nt18.02■□□□□ 0.48
RKM1Q08961 NOP1YDL014W 984 nt17.37■□□□□ 0.37
RKM1Q08961 MDJ1YFL016C 1536 nt16.58■□□□□ 0.24
RKM1Q08961 YKL036CYKL036C 393 nt15.7■□□□□ 0.1
RKM1Q08961 YJL027CYJL027C 417 nt15.24■□□□□ 0.03
RKM1Q08961 SRX1YKL086W 384 nt15.22■□□□□ 0.03
RKM1Q08961 Q0297Q0297 156 nt15.15■□□□□ 0.02
RKM1Q08961 SSA3YBL075C 1950 nt14.95□□□□□ -0.02
RKM1Q08961 DBP2YNL112W 1641 nt14.58□□□□□ -0.08
RKM1Q08961 YCR051WYCR051W 669 nt14.34□□□□□ -0.11
RKM1Q08961 YBR190WYBR190W 312 nt14.25□□□□□ -0.13
RKM1Q08961 SCS3YGL126W 1143 nt14.11□□□□□ -0.15
RKM1Q08961 TRN1tP(UGG)A 72 nt14□□□□□ -0.17
RKM1Q08961 SUF9tP(UGG)F 72 nt14□□□□□ -0.17
RKM1Q08961 SUF8tP(UGG)H 72 nt14□□□□□ -0.17
RKM1Q08961 tP(UGG)LtP(UGG)L 72 nt14□□□□□ -0.17
RKM1Q08961 SUF7tP(UGG)M 72 nt14□□□□□ -0.17
RKM1Q08961 tP(UGG)N1tP(UGG)N1 72 nt14□□□□□ -0.17
RKM1Q08961 tP(UGG)N2tP(UGG)N2 72 nt14□□□□□ -0.17
RKM1Q08961 tP(UGG)O1tP(UGG)O1 72 nt14□□□□□ -0.17
RKM1Q08961 SUF11tP(UGG)O2 72 nt14□□□□□ -0.17
RKM1Q08961 RTC3YHR087W 336 nt13.83□□□□□ -0.2
RKM1Q08961 CCC1YLR220W 969 nt13.77□□□□□ -0.21
RKM1Q08961 YOL085CYOL085C 342 nt13.64□□□□□ -0.23
RKM1Q08961 RPP1BYDL130W 321 nt13.57□□□□□ -0.24
RKM1Q08961 RVS167YDR388W 1449 nt13.52□□□□□ -0.25
RKM1Q08961 PUT4YOR348C 1884 nt13.46□□□□□ -0.25
RKM1Q08961 SCJ1YMR214W 1134 nt13.46□□□□□ -0.25
RKM1Q08961 PKP1YIL042C 1185 nt13.42□□□□□ -0.26
RKM1Q08961 tP(UGG)O3tP(UGG)O3 72 nt13.1□□□□□ -0.31
RKM1Q08961 SSA4YER103W 1929 nt13.03□□□□□ -0.32
RKM1Q08961 PET122YER153C 765 nt13.01□□□□□ -0.33
RKM1Q08961 SHR5YOL110W 714 nt13.01□□□□□ -0.33
RKM1Q08961 POA1YBR022W 534 nt12.97□□□□□ -0.33
RKM1Q08961 SPT5YML010W 3192 nt12.97□□□□□ -0.33
RKM1Q08961 ARE1YCR048W 1833 nt12.92□□□□□ -0.34
RKM1Q08961 BSC6YOL137W 1494 nt12.88□□□□□ -0.35
RKM1Q08961 URN1YPR152C 1398 nt12.86□□□□□ -0.35
RKM1Q08961 OPI9YLR338W 858 nt12.79□□□□□ -0.36
RKM1Q08961 YHR049C-AYHR049C-A 297 nt12.78□□□□□ -0.36
RKM1Q08961 SAH1YER043C 1350 nt12.78□□□□□ -0.36
RKM1Q08961 DEP1YAL013W 1218 nt12.72□□□□□ -0.37
RKM1Q08961 SCR1SCR1 522 nt12.71□□□□□ -0.37
RKM1Q08961 YDJ1YNL064C 1230 nt12.7□□□□□ -0.38
RKM1Q08961 BDF1YLR399C 2061 nt12.61□□□□□ -0.39
RKM1Q08961 RRN5YLR141W 1092 nt12.58□□□□□ -0.4
RKM1Q08961 RPN10YHR200W 807 nt12.56□□□□□ -0.4
RKM1Q08961 ATS1YAL020C 1002 nt12.56□□□□□ -0.4
RKM1Q08961 PAC11YDR488C 1602 nt12.53□□□□□ -0.4
RKM1Q08961 YNL208WYNL208W 600 nt12.51□□□□□ -0.41
RKM1Q08961 NVJ2YPR091C 2313 nt12.46□□□□□ -0.41
RKM1Q08961 TAT1YBR069C 1860 nt12.43□□□□□ -0.42
RKM1Q08961 GAR1YHR089C 618 nt12.42□□□□□ -0.42
RKM1Q08961 BUD23YCR047C 828 nt12.4□□□□□ -0.42
RKM1Q08961 PUN1YLR414C 792 nt12.39□□□□□ -0.43
RKM1Q08961 FPS1YLL043W 2010 nt12.37□□□□□ -0.43
RKM1Q08961 YER088W-BYER088W-B 147 nt12.35□□□□□ -0.43
RKM1Q08961 PTC2YER089C 1395 nt12.3□□□□□ -0.44
RKM1Q08961 YJR018WYJR018W 363 nt12.25□□□□□ -0.45
RKM1Q08961 MEP2YNL142W 1500 nt12.2□□□□□ -0.46
RKM1Q08961 NAB2YGL122C 1578 nt12.19□□□□□ -0.46
RKM1Q08961 RSB1YOR049C 1065 nt12.17□□□□□ -0.46
RKM1Q08961 SSA1YAL005C 1929 nt12.17□□□□□ -0.46
RKM1Q08961 YJR120WYJR120W 351 nt12.07□□□□□ -0.48
RKM1Q08961 TIR1YER011W 765 nt12.05□□□□□ -0.48
RKM1Q08961 FIS1YIL065C 468 nt12.03□□□□□ -0.48
RKM1Q08961 DAL1YIR027C 1383 nt11.97□□□□□ -0.49
RKM1Q08961 DCW1YKL046C 1350 nt11.96□□□□□ -0.49
RKM1Q08961 YBR220CYBR220C 1683 nt11.9□□□□□ -0.5
RKM1Q08961 INM2YDR287W 879 nt11.86□□□□□ -0.51
RKM1Q08961 RPP2BYDR382W 333 nt11.85□□□□□ -0.51
RKM1Q08961 PHO4YFR034C 939 nt11.85□□□□□ -0.51
RKM1Q08961 FPR4YLR449W 1179 nt11.84□□□□□ -0.51
RKM1Q08961 YMR090WYMR090W 684 nt11.83□□□□□ -0.52
RKM1Q08961 YPS1YLR120C 1710 nt11.79□□□□□ -0.52
RKM1Q08961 EMI2YDR516C 1503 nt11.79□□□□□ -0.52
RKM1Q08961 SRB2YHR041C 633 nt11.78□□□□□ -0.52
RKM1Q08961 PCH2YBR186W 1695 nt11.72□□□□□ -0.53
RKM1Q08961 GUT2YIL155C 1950 nt11.69□□□□□ -0.54
RKM1Q08961 PST2YDR032C 597 nt11.69□□□□□ -0.54
RKM1Q08961 YHR165W-AYHR165W-A 312 nt11.69□□□□□ -0.54
RKM1Q08961 YBL100CYBL100C 315 nt11.67□□□□□ -0.54
RKM1Q08961 SDH1YKL148C 1923 nt11.66□□□□□ -0.54
RKM1Q08961 YDR095CYDR095C 411 nt11.66□□□□□ -0.54
RKM1Q08961 SEC11YIR022W 504 nt11.65□□□□□ -0.54
RKM1Q08961 YDL221WYDL221W 552 nt11.63□□□□□ -0.55
RKM1Q08961 BDH2YAL061W 1254 nt11.61□□□□□ -0.55
RKM1Q08961 Q0182Q0182 405 nt11.57□□□□□ -0.56
RKM1Q08961 FUN26YAL022C 1554 nt11.54□□□□□ -0.56
RKM1Q08961 PTP1YDL230W 1008 nt11.47□□□□□ -0.57
RKM1Q08961 UME6YDR207C 2511 nt11.45□□□□□ -0.58
RKM1Q08961 WWM1YFL010C 636 nt11.45□□□□□ -0.58
RKM1Q08961 PIB2YGL023C 1908 nt11.45□□□□□ -0.58
RKM1Q08961 SCC4YER147C 1875 nt11.44□□□□□ -0.58
RKM1Q08961 CAC2YML102W 1407 nt11.43□□□□□ -0.58
RKM1Q08961 TRM9YML014W 840 nt11.42□□□□□ -0.58
RKM1Q08961 RPP2AYOL039W 321 nt11.41□□□□□ -0.58
RKM1Q08961 LSM3YLR438C-A 270 nt11.4□□□□□ -0.58
RKM1Q08961 ALF1YNL148C 765 nt11.4□□□□□ -0.58
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms