RNA–Protein interactions for RNA: YBR186W

PCH2, Transcript of Hexameric ring ATPase that remodels chromosome axis protein Hop1p, yeastyeast

Gene PCH2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCH2YBR186W SGS1P35187 1447 aa19.32■□□□□ 0.68
PCH2YBR186W SPA2P23201 1466 aaKnown RBP19.03■□□□□ 0.64
PCH2YBR186W SSN2P38931 1420 aa18.81■□□□□ 0.6
PCH2YBR186W INO80P53115 1489 aa18.7■□□□□ 0.58
PCH2YBR186W DRS1P32892 752 aaKnown RBP18.3■□□□□ 0.52
PCH2YBR186W TCB3Q03640 1545 aaKnown RBP18.16■□□□□ 0.5
PCH2YBR186W TY1B-DR4Q07793 1604 aa17.82■□□□□ 0.44
PCH2YBR186W HSL1P34244 1518 aa17.69■□□□□ 0.42
PCH2YBR186W SKI3P17883 1432 aaKnown RBP17.67■□□□□ 0.42
PCH2YBR186W SPT6P23615 1451 aaKnown RBP17.63■□□□□ 0.41
PCH2YBR186W XRN1P22147 1528 aaKnown RBP17.44■□□□□ 0.38
PCH2YBR186W HIR3P47171 1648 aa17.42■□□□□ 0.38
PCH2YBR186W CHD1P32657 1468 aa17.28■□□□□ 0.36
PCH2YBR186W REV3P14284 1504 aa17.25■□□□□ 0.35
PCH2YBR186W MMS22Q06164 1454 aa17.25■□□□□ 0.35
PCH2YBR186W THO2P53552 1597 aaKnown RBP17.2■□□□□ 0.34
PCH2YBR186W SIN3P22579 1536 aa17.15■□□□□ 0.34
PCH2YBR186W SWR1Q05471 1514 aa17.11■□□□□ 0.33
PCH2YBR186W SSK2P53599 1579 aa17.09■□□□□ 0.33
PCH2YBR186W MON2P48563 1636 aaPredicted RBP17.06■□□□□ 0.32
PCH2YBR186W TAF2P23255 1407 aa17.05■□□□□ 0.32
PCH2YBR186W MYO2P19524 1574 aaKnown RBP16.93■□□□□ 0.3
PCH2YBR186W ESP1Q03018 1630 aa16.89■□□□□ 0.29
PCH2YBR186W STU1P38198 1513 aa16.86■□□□□ 0.29
PCH2YBR186W POL1P13382 1468 aa16.83■□□□□ 0.28
PCH2YBR186W YTA7P40340 1379 aa16.81■□□□□ 0.28
PCH2YBR186W UFD4P33202 1483 aa16.77■□□□□ 0.27
PCH2YBR186W SAS10Q12136 610 aaPredicted RBP16.75■□□□□ 0.27
PCH2YBR186W RSE1Q04693 1361 aaKnown RBP16.71■□□□□ 0.27
PCH2YBR186W TRM732Q03496 1420 aa16.67■□□□□ 0.26
PCH2YBR186W BPT1P14772 1559 aa16.66■□□□□ 0.26
PCH2YBR186W YPK9Q12697 1472 aa16.63■□□□□ 0.25
PCH2YBR186W BUD4P47136 1447 aa16.62■□□□□ 0.25
PCH2YBR186W IKI3Q06706 1349 aaKnown RBP16.6■□□□□ 0.25
PCH2YBR186W ECM5Q03214 1411 aa16.56■□□□□ 0.24
PCH2YBR186W NSR1P27476 414 aaKnown RBP RIP-Chip data16.56■□□□□ 0.24not detected
PCH2YBR186W ATG2P53855 1592 aa16.55■□□□□ 0.24
PCH2YBR186W SCC2Q04002 1493 aa16.54■□□□□ 0.24
PCH2YBR186W NOP2P40991 618 aaKnown RBP16.54■□□□□ 0.24
PCH2YBR186W DNA2P38859 1522 aa16.53■□□□□ 0.24
PCH2YBR186W MYO4P32492 1471 aa16.52■□□□□ 0.23
PCH2YBR186W YOR1P53049 1477 aa16.52■□□□□ 0.23
PCH2YBR186W RKR1Q04781 1562 aa16.51■□□□□ 0.23
PCH2YBR186W SPP41P38904 1435 aa16.45■□□□□ 0.22
PCH2YBR186W TAF7Q05021 590 aa16.43■□□□□ 0.22
PCH2YBR186W SMC4Q12267 1418 aa16.35■□□□□ 0.21
PCH2YBR186W RPO31P04051 1460 aa16.33■□□□□ 0.2
PCH2YBR186W SNQ2P32568 1501 aaKnown RBP16.33■□□□□ 0.2
PCH2YBR186W NUP170P38181 1502 aa16.33■□□□□ 0.2
PCH2YBR186W SSM4P40318 1319 aa16.33■□□□□ 0.2
PCH2YBR186W STH1P32597 1359 aa16.33■□□□□ 0.2
PCH2YBR186W KOG1P38873 1557 aa16.32■□□□□ 0.2
PCH2YBR186W TOP2P06786 1428 aaKnown RBP16.31■□□□□ 0.2
PCH2YBR186W PEP1P32319 1579 aa16.24■□□□□ 0.19
PCH2YBR186W YCF1P39109 1515 aaKnown RBP16.2■□□□□ 0.18
PCH2YBR186W IFH1P39520 1085 aa16.17■□□□□ 0.18
PCH2YBR186W MDS3P53094 1487 aa16.17■□□□□ 0.18
PCH2YBR186W MLP2P40457 1679 aa16.15■□□□□ 0.18
PCH2YBR186W GEA1P47102 1408 aaPredicted RBP16.15■□□□□ 0.18
PCH2YBR186W POL5P39985 1022 aaKnown RBP16.14■□□□□ 0.17
PCH2YBR186W PDR15Q04182 1529 aaKnown RBP16.13■□□□□ 0.17
PCH2YBR186W PAN1P32521 1480 aa16.13■□□□□ 0.17
PCH2YBR186W ENP1P38333 483 aaKnown RBP16.1■□□□□ 0.17
PCH2YBR186W TY1B-DR3Q99231 1755 aa16.07■□□□□ 0.16
PCH2YBR186W TSC11P40061 1430 aa16.07■□□□□ 0.16
PCH2YBR186W MTC1P47018 478 aaKnown RBP16.05■□□□□ 0.16
PCH2YBR186W TY2B-LR1P0C2J3 1770 aa16.05■□□□□ 0.16
PCH2YBR186W TY2B-FP0CX63 1770 aa16.05■□□□□ 0.16
PCH2YBR186W TY2B-GR2P0CX64 1770 aa16.05■□□□□ 0.16
PCH2YBR186W TY2B-CP25384 1770 aa16.05■□□□□ 0.16
PCH2YBR186W TY2B-DR2Q03494 1770 aa16.05■□□□□ 0.16
PCH2YBR186W TY1B-DR1Q03855 1755 aa16.05■□□□□ 0.16
PCH2YBR186W TY2B-DR3Q07791 1770 aaKnown RBP16.05■□□□□ 0.16
PCH2YBR186W TY2B-OR1Q12113 1770 aa16.05■□□□□ 0.16
PCH2YBR186W TY2B-DR1Q12472 1770 aa16.05■□□□□ 0.16
PCH2YBR186W TY2B-OR2Q12501 1770 aa16.05■□□□□ 0.16
PCH2YBR186W ULS1Q08562 1619 aa15.99■□□□□ 0.15
PCH2YBR186W RTT106P40161 455 aa15.99■□□□□ 0.15
PCH2YBR186W TY2B-BQ12491 1770 aa15.95■□□□□ 0.14
PCH2YBR186W SEC3P33332 1336 aaKnown RBP15.89■□□□□ 0.14
PCH2YBR186W TY3B-GQ99315 1547 aa15.88■□□□□ 0.13
PCH2YBR186W SPT7P35177 1332 aa15.87■□□□□ 0.13
PCH2YBR186W VPS15P22219 1454 aa15.83■□□□□ 0.12
PCH2YBR186W VTH1P40438 1549 aa15.8■□□□□ 0.12
PCH2YBR186W VTH2P40890 1549 aa15.8■□□□□ 0.12
PCH2YBR186W TY1B-HO13535 1793 aa15.79■□□□□ 0.12
PCH2YBR186W TY1B-DR5P0C2I2 1755 aa15.79■□□□□ 0.12
PCH2YBR186W TY1B-DR6P0C2I3 1755 aa15.79■□□□□ 0.12
PCH2YBR186W TY1B-LR2P0C2I5 1755 aa15.79■□□□□ 0.12
PCH2YBR186W TY1B-LR3P0C2I6 1755 aaKnown RBP15.79■□□□□ 0.12
PCH2YBR186W TY1B-PR1P0C2I9 1755 aaKnown RBP15.79■□□□□ 0.12
PCH2YBR186W TY1B-PR2P0C2J0 1756 aa15.79■□□□□ 0.12
PCH2YBR186W TY1B-PR3P0C2J1 1755 aaKnown RBP15.79■□□□□ 0.12
PCH2YBR186W TY1B-JR1P47098 1755 aa15.79■□□□□ 0.12
PCH2YBR186W TY1B-ML2Q03434 1755 aaKnown RBP15.79■□□□□ 0.12
PCH2YBR186W TY1B-ER1Q03612 1755 aa15.79■□□□□ 0.12
PCH2YBR186W TY1B-ML1Q04711 1755 aaKnown RBP15.79■□□□□ 0.12
PCH2YBR186W TY1B-GR2Q12269 1755 aa15.79■□□□□ 0.12
PCH2YBR186W TY1B-OLQ12273 1755 aa15.79■□□□□ 0.12
PCH2YBR186W TY1B-PLQ12414 1755 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms