Protein–RNA interactions for Protein: P38070

YPK3, Serine/threonine-protein kinase YPK3, yeastyeast

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPK3P38070 NSR1YGR159C 1245 nt18.21■□□□□ 0.51
YPK3P38070 YML009W-BYML009W-B 477 nt17.93■□□□□ 0.46
YPK3P38070 NOP1YDL014W 984 nt17.37■□□□□ 0.37
YPK3P38070 MDJ1YFL016C 1536 nt16.91■□□□□ 0.3
YPK3P38070 YKL036CYKL036C 393 nt15.77■□□□□ 0.12
YPK3P38070 YJL027CYJL027C 417 nt15.5■□□□□ 0.07
YPK3P38070 SRX1YKL086W 384 nt15.14■□□□□ 0.01
YPK3P38070 Q0297Q0297 156 nt15.09■□□□□ 0.01
YPK3P38070 DBP2YNL112W 1641 nt14.64□□□□□ -0.07
YPK3P38070 SSA3YBL075C 1950 nt14.59□□□□□ -0.07
YPK3P38070 YBR190WYBR190W 312 nt14.54□□□□□ -0.08
YPK3P38070 YCR051WYCR051W 669 nt14.34□□□□□ -0.11
YPK3P38070 RTC3YHR087W 336 nt14.21□□□□□ -0.13
YPK3P38070 SCS3YGL126W 1143 nt14.19□□□□□ -0.14
YPK3P38070 TRN1tP(UGG)A 72 nt13.83□□□□□ -0.2
YPK3P38070 SUF9tP(UGG)F 72 nt13.83□□□□□ -0.2
YPK3P38070 SUF8tP(UGG)H 72 nt13.83□□□□□ -0.2
YPK3P38070 tP(UGG)LtP(UGG)L 72 nt13.83□□□□□ -0.2
YPK3P38070 SUF7tP(UGG)M 72 nt13.83□□□□□ -0.2
YPK3P38070 tP(UGG)N1tP(UGG)N1 72 nt13.83□□□□□ -0.2
YPK3P38070 tP(UGG)N2tP(UGG)N2 72 nt13.83□□□□□ -0.2
YPK3P38070 tP(UGG)O1tP(UGG)O1 72 nt13.83□□□□□ -0.2
YPK3P38070 SUF11tP(UGG)O2 72 nt13.83□□□□□ -0.2
YPK3P38070 PUT4YOR348C 1884 nt13.77□□□□□ -0.21
YPK3P38070 CCC1YLR220W 969 nt13.68□□□□□ -0.22
YPK3P38070 YOL085CYOL085C 342 nt13.63□□□□□ -0.23
YPK3P38070 RVS167YDR388W 1449 nt13.61□□□□□ -0.23
YPK3P38070 RPP1BYDL130W 321 nt13.54□□□□□ -0.24
YPK3P38070 PKP1YIL042C 1185 nt13.43□□□□□ -0.26
YPK3P38070 SCJ1YMR214W 1134 nt13.42□□□□□ -0.26
YPK3P38070 ARE1YCR048W 1833 nt13.31□□□□□ -0.28
YPK3P38070 POA1YBR022W 534 nt13.27□□□□□ -0.29
YPK3P38070 YHR049C-AYHR049C-A 297 nt13.17□□□□□ -0.3
YPK3P38070 BSC6YOL137W 1494 nt13.14□□□□□ -0.31
YPK3P38070 SAH1YER043C 1350 nt13.1□□□□□ -0.31
YPK3P38070 URN1YPR152C 1398 nt13.05□□□□□ -0.32
YPK3P38070 SPT5YML010W 3192 nt13.02□□□□□ -0.33
YPK3P38070 tP(UGG)O3tP(UGG)O3 72 nt12.99□□□□□ -0.33
YPK3P38070 OPI9YLR338W 858 nt12.98□□□□□ -0.33
YPK3P38070 SHR5YOL110W 714 nt12.96□□□□□ -0.33
YPK3P38070 PET122YER153C 765 nt12.94□□□□□ -0.34
YPK3P38070 SSA4YER103W 1929 nt12.94□□□□□ -0.34
YPK3P38070 DEP1YAL013W 1218 nt12.86□□□□□ -0.35
YPK3P38070 BUD23YCR047C 828 nt12.8□□□□□ -0.36
YPK3P38070 SCR1SCR1 522 nt12.8□□□□□ -0.36
YPK3P38070 RPN10YHR200W 807 nt12.68□□□□□ -0.38
YPK3P38070 ATS1YAL020C 1002 nt12.62□□□□□ -0.39
YPK3P38070 PUN1YLR414C 792 nt12.6□□□□□ -0.39
YPK3P38070 YDJ1YNL064C 1230 nt12.6□□□□□ -0.39
YPK3P38070 PTC2YER089C 1395 nt12.58□□□□□ -0.4
YPK3P38070 YNL208WYNL208W 600 nt12.55□□□□□ -0.4
YPK3P38070 RRN5YLR141W 1092 nt12.54□□□□□ -0.4
YPK3P38070 NAB2YGL122C 1578 nt12.5□□□□□ -0.41
YPK3P38070 BDF1YLR399C 2061 nt12.5□□□□□ -0.41
YPK3P38070 MEP2YNL142W 1500 nt12.4□□□□□ -0.42
YPK3P38070 YJR018WYJR018W 363 nt12.39□□□□□ -0.43
YPK3P38070 TAT1YBR069C 1860 nt12.32□□□□□ -0.44
YPK3P38070 GAR1YHR089C 618 nt12.32□□□□□ -0.44
YPK3P38070 YER088W-BYER088W-B 147 nt12.29□□□□□ -0.44
YPK3P38070 FIS1YIL065C 468 nt12.29□□□□□ -0.44
YPK3P38070 RSB1YOR049C 1065 nt12.23□□□□□ -0.45
YPK3P38070 DAL1YIR027C 1383 nt12.22□□□□□ -0.45
YPK3P38070 DCW1YKL046C 1350 nt12.2□□□□□ -0.46
YPK3P38070 FPR4YLR449W 1179 nt12.19□□□□□ -0.46
YPK3P38070 YPS1YLR120C 1710 nt12.11□□□□□ -0.47
YPK3P38070 PHO4YFR034C 939 nt12.11□□□□□ -0.47
YPK3P38070 PAC11YDR488C 1602 nt12.09□□□□□ -0.47
YPK3P38070 YJR120WYJR120W 351 nt12.07□□□□□ -0.48
YPK3P38070 YHR165W-AYHR165W-A 312 nt12.04□□□□□ -0.48
YPK3P38070 EMI2YDR516C 1503 nt12.01□□□□□ -0.49
YPK3P38070 YBR220CYBR220C 1683 nt12.01□□□□□ -0.49
YPK3P38070 INM2YDR287W 879 nt12.01□□□□□ -0.49
YPK3P38070 YMR090WYMR090W 684 nt11.96□□□□□ -0.49
YPK3P38070 RPP2BYDR382W 333 nt11.95□□□□□ -0.5
YPK3P38070 YDR095CYDR095C 411 nt11.93□□□□□ -0.5
YPK3P38070 TIR1YER011W 765 nt11.93□□□□□ -0.5
YPK3P38070 SSA1YAL005C 1929 nt11.9□□□□□ -0.51
YPK3P38070 YDL221WYDL221W 552 nt11.86□□□□□ -0.51
YPK3P38070 SDH1YKL148C 1923 nt11.85□□□□□ -0.51
YPK3P38070 YBL100CYBL100C 315 nt11.82□□□□□ -0.52
YPK3P38070 CAC2YML102W 1407 nt11.77□□□□□ -0.52
YPK3P38070 PCH2YBR186W 1695 nt11.75□□□□□ -0.53
YPK3P38070 PTP1YDL230W 1008 nt11.72□□□□□ -0.53
YPK3P38070 PST2YDR032C 597 nt11.72□□□□□ -0.53
YPK3P38070 GUT2YIL155C 1950 nt11.7□□□□□ -0.54
YPK3P38070 RPP2AYOL039W 321 nt11.7□□□□□ -0.54
YPK3P38070 SEC11YIR022W 504 nt11.68□□□□□ -0.54
YPK3P38070 SCC4YER147C 1875 nt11.67□□□□□ -0.54
YPK3P38070 NVJ2YPR091C 2313 nt11.66□□□□□ -0.54
YPK3P38070 FUN26YAL022C 1554 nt11.65□□□□□ -0.54
YPK3P38070 ALF1YNL148C 765 nt11.64□□□□□ -0.55
YPK3P38070 IRC15YPL017C 1500 nt11.6□□□□□ -0.55
YPK3P38070 SRB2YHR041C 633 nt11.58□□□□□ -0.56
YPK3P38070 BDH2YAL061W 1254 nt11.58□□□□□ -0.56
YPK3P38070 GIS3YLR094C 1509 nt11.53□□□□□ -0.56
YPK3P38070 YSC84YHR016C 1407 nt11.51□□□□□ -0.57
YPK3P38070 PIB2YGL023C 1908 nt11.5□□□□□ -0.57
YPK3P38070 TRM9YML014W 840 nt11.48□□□□□ -0.57
YPK3P38070 SIS1YNL007C 1059 nt11.45□□□□□ -0.58
YPK3P38070 CCT6YDR188W 1641 nt11.41□□□□□ -0.58
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms