Protein–RNA interactions for Protein: P25579

LRE1, Laminarase-resistance protein LRE1, yeastyeast

Known RBP Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LRE1P25579 YML009W-BYML009W-B 477 nt21.57■■□□□ 1.04
LRE1P25579 NSR1YGR159C 1245 nt21.42■■□□□ 1.02
LRE1P25579 NOP1YDL014W 984 nt21.07■□□□□ 0.96
LRE1P25579 YKL036CYKL036C 393 nt19.53■□□□□ 0.72
LRE1P25579 MDJ1YFL016C 1536 nt18.85■□□□□ 0.61
LRE1P25579 Q0297Q0297 156 nt18.5■□□□□ 0.55
LRE1P25579 SRX1YKL086W 384 nt18.41■□□□□ 0.54
LRE1P25579 YJL027CYJL027C 417 nt18.22■□□□□ 0.51
LRE1P25579 SCS3YGL126W 1143 nt17.81■□□□□ 0.44
LRE1P25579 YCR051WYCR051W 669 nt17.43■□□□□ 0.38
LRE1P25579 YOL085CYOL085C 342 nt16.91■□□□□ 0.3
LRE1P25579 DBP2YNL112W 1641 nt16.77■□□□□ 0.27
LRE1P25579 RPP1BYDL130W 321 nt16.59■□□□□ 0.25
LRE1P25579 PKP1YIL042C 1185 nt16.59■□□□□ 0.25
LRE1P25579 TRN1tP(UGG)A 72 nt16.58■□□□□ 0.24
LRE1P25579 SUF9tP(UGG)F 72 nt16.58■□□□□ 0.24
LRE1P25579 SUF8tP(UGG)H 72 nt16.58■□□□□ 0.24
LRE1P25579 tP(UGG)LtP(UGG)L 72 nt16.58■□□□□ 0.24
LRE1P25579 SUF7tP(UGG)M 72 nt16.58■□□□□ 0.24
LRE1P25579 tP(UGG)N1tP(UGG)N1 72 nt16.58■□□□□ 0.24
LRE1P25579 tP(UGG)N2tP(UGG)N2 72 nt16.58■□□□□ 0.24
LRE1P25579 tP(UGG)O1tP(UGG)O1 72 nt16.58■□□□□ 0.24
LRE1P25579 SUF11tP(UGG)O2 72 nt16.58■□□□□ 0.24
LRE1P25579 CCC1YLR220W 969 nt16.36■□□□□ 0.21
LRE1P25579 YBR190WYBR190W 312 nt16.11■□□□□ 0.17
LRE1P25579 ATS1YAL020C 1002 nt15.97■□□□□ 0.15
LRE1P25579 SCJ1YMR214W 1134 nt15.97■□□□□ 0.15
LRE1P25579 PET122YER153C 765 nt15.8■□□□□ 0.12
LRE1P25579 RVS167YDR388W 1449 nt15.77■□□□□ 0.12
LRE1P25579 tP(UGG)O3tP(UGG)O3 72 nt15.71■□□□□ 0.11
LRE1P25579 RTC3YHR087W 336 nt15.69■□□□□ 0.1
LRE1P25579 SCR1SCR1 522 nt15.67■□□□□ 0.1
LRE1P25579 RRN5YLR141W 1092 nt15.36■□□□□ 0.05
LRE1P25579 SHR5YOL110W 714 nt15.27■□□□□ 0.04
LRE1P25579 YDJ1YNL064C 1230 nt15.24■□□□□ 0.03
LRE1P25579 YER088W-BYER088W-B 147 nt15.07■□□□□ 0
LRE1P25579 RSB1YOR049C 1065 nt15.05■□□□□ -0
LRE1P25579 GAR1YHR089C 618 nt14.81□□□□□ -0.04
LRE1P25579 PST2YDR032C 597 nt14.79□□□□□ -0.04
LRE1P25579 URN1YPR152C 1398 nt14.75□□□□□ -0.05
LRE1P25579 DEP1YAL013W 1218 nt14.74□□□□□ -0.05
LRE1P25579 RPN10YHR200W 807 nt14.58□□□□□ -0.08
LRE1P25579 YNL208WYNL208W 600 nt14.57□□□□□ -0.08
LRE1P25579 OPI9YLR338W 858 nt14.55□□□□□ -0.08
LRE1P25579 PUT4YOR348C 1884 nt14.53□□□□□ -0.08
LRE1P25579 SAH1YER043C 1350 nt14.39□□□□□ -0.11
LRE1P25579 TIR1YER011W 765 nt14.34□□□□□ -0.11
LRE1P25579 ARE1YCR048W 1833 nt14.3□□□□□ -0.12
LRE1P25579 YKL097CYKL097C 411 nt14.23□□□□□ -0.13
LRE1P25579 SSA1YAL005C 1929 nt14.14□□□□□ -0.15
LRE1P25579 SHU1YHL006C 453 nt14.14□□□□□ -0.15
LRE1P25579 PUN1YLR414C 792 nt14.13□□□□□ -0.15
LRE1P25579 YJR018WYJR018W 363 nt14.09□□□□□ -0.15
LRE1P25579 YHR049C-AYHR049C-A 297 nt14.08□□□□□ -0.16
LRE1P25579 POA1YBR022W 534 nt14.05□□□□□ -0.16
LRE1P25579 SRB2YHR041C 633 nt13.91□□□□□ -0.18
LRE1P25579 YJR120WYJR120W 351 nt13.91□□□□□ -0.18
LRE1P25579 PTC2YER089C 1395 nt13.9□□□□□ -0.18
LRE1P25579 YAL037C-BYAL037C-B 975 nt13.86□□□□□ -0.19
LRE1P25579 RPP2BYDR382W 333 nt13.83□□□□□ -0.2
LRE1P25579 BUD23YCR047C 828 nt13.74□□□□□ -0.21
LRE1P25579 BSC6YOL137W 1494 nt13.74□□□□□ -0.21
LRE1P25579 NAB2YGL122C 1578 nt13.73□□□□□ -0.21
LRE1P25579 WWM1YFL010C 636 nt13.71□□□□□ -0.21
LRE1P25579 YGR021WYGR021W 873 nt13.7□□□□□ -0.22
LRE1P25579 HOM6YJR139C 1080 nt13.65□□□□□ -0.22
LRE1P25579 YOR139CYOR139C 393 nt13.65□□□□□ -0.22
LRE1P25579 INM2YDR287W 879 nt13.6□□□□□ -0.23
LRE1P25579 BDH2YAL061W 1254 nt13.6□□□□□ -0.23
LRE1P25579 SSA3YBL075C 1950 nt13.58□□□□□ -0.24
LRE1P25579 DAL1YIR027C 1383 nt13.57□□□□□ -0.24
LRE1P25579 MNP1YGL068W 585 nt13.55□□□□□ -0.24
LRE1P25579 FIS1YIL065C 468 nt13.54□□□□□ -0.24
LRE1P25579 YFL021C-AYFL021C-A 855 nt13.52□□□□□ -0.25
LRE1P25579 NPL3YDR432W 1245 nt13.5□□□□□ -0.25
LRE1P25579 FPR4YLR449W 1179 nt13.48□□□□□ -0.25
LRE1P25579 LSM3YLR438C-A 270 nt13.46□□□□□ -0.25
LRE1P25579 YBL100CYBL100C 315 nt13.45□□□□□ -0.26
LRE1P25579 RKM5YLR137W 1104 nt13.44□□□□□ -0.26
LRE1P25579 PHO4YFR034C 939 nt13.42□□□□□ -0.26
LRE1P25579 YOL037CYOL037C 354 nt13.42□□□□□ -0.26
LRE1P25579 TRM9YML014W 840 nt13.31□□□□□ -0.28
LRE1P25579 FUN26YAL022C 1554 nt13.31□□□□□ -0.28
LRE1P25579 CCT6YDR188W 1641 nt13.19□□□□□ -0.3
LRE1P25579 YPS1YLR120C 1710 nt13.15□□□□□ -0.3
LRE1P25579 tM(CAU)CtM(CAU)C 72 nt13.13□□□□□ -0.31
LRE1P25579 IMT4tM(CAU)E 72 nt13.13□□□□□ -0.31
LRE1P25579 IMT3tM(CAU)J3 72 nt13.13□□□□□ -0.31
LRE1P25579 IMT1tM(CAU)O1 72 nt13.13□□□□□ -0.31
LRE1P25579 IMT2tM(CAU)P 72 nt13.13□□□□□ -0.31
LRE1P25579 YLR281CYLR281C 468 nt13.1□□□□□ -0.31
LRE1P25579 YDR095CYDR095C 411 nt13.08□□□□□ -0.32
LRE1P25579 ALF1YNL148C 765 nt13.08□□□□□ -0.32
LRE1P25579 SPT5YML010W 3192 nt13.06□□□□□ -0.32
LRE1P25579 SUF2tP(AGG)C 72 nt13.06□□□□□ -0.32
LRE1P25579 SUF10tP(AGG)N 72 nt13.06□□□□□ -0.32
LRE1P25579 WHI5YOR083W 888 nt13.03□□□□□ -0.32
LRE1P25579 PUS2YGL063W 1113 nt12.98□□□□□ -0.33
LRE1P25579 YHR165W-AYHR165W-A 312 nt12.95□□□□□ -0.34
LRE1P25579 YLR154C-GYLR154C-G 150 nt12.93□□□□□ -0.34
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms