Protein–RNA interactions for Protein: Q3E705

EFG1, rRNA-processing protein EFG1, yeastyeast

Known RBP Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
EFG1Q3E705 YML009W-BYML009W-B 477 nt21.04■□□□□ 0.96
EFG1Q3E705 NSR1YGR159C 1245 nt20.96■□□□□ 0.95
EFG1Q3E705 NOP1YDL014W 984 nt20.48■□□□□ 0.87
EFG1Q3E705 YKL036CYKL036C 393 nt18.85■□□□□ 0.61
EFG1Q3E705 MDJ1YFL016C 1536 nt18.6■□□□□ 0.57
EFG1Q3E705 Q0297Q0297 156 nt17.91■□□□□ 0.46
EFG1Q3E705 SRX1YKL086W 384 nt17.88■□□□□ 0.45
EFG1Q3E705 YJL027CYJL027C 417 nt17.59■□□□□ 0.41
EFG1Q3E705 SCS3YGL126W 1143 nt17.12■□□□□ 0.33
EFG1Q3E705 YCR051WYCR051W 669 nt16.94■□□□□ 0.3
EFG1Q3E705 DBP2YNL112W 1641 nt16.45■□□□□ 0.22
EFG1Q3E705 YOL085CYOL085C 342 nt16.32■□□□□ 0.2
EFG1Q3E705 TRN1tP(UGG)A 72 nt16.18■□□□□ 0.18
EFG1Q3E705 SUF9tP(UGG)F 72 nt16.18■□□□□ 0.18
EFG1Q3E705 SUF8tP(UGG)H 72 nt16.18■□□□□ 0.18
EFG1Q3E705 tP(UGG)LtP(UGG)L 72 nt16.18■□□□□ 0.18
EFG1Q3E705 SUF7tP(UGG)M 72 nt16.18■□□□□ 0.18
EFG1Q3E705 tP(UGG)N1tP(UGG)N1 72 nt16.18■□□□□ 0.18
EFG1Q3E705 tP(UGG)N2tP(UGG)N2 72 nt16.18■□□□□ 0.18
EFG1Q3E705 tP(UGG)O1tP(UGG)O1 72 nt16.18■□□□□ 0.18
EFG1Q3E705 SUF11tP(UGG)O2 72 nt16.18■□□□□ 0.18
EFG1Q3E705 RPP1BYDL130W 321 nt16.06■□□□□ 0.16
EFG1Q3E705 PKP1YIL042C 1185 nt16.05■□□□□ 0.16
EFG1Q3E705 CCC1YLR220W 969 nt16■□□□□ 0.15
EFG1Q3E705 YBR190WYBR190W 312 nt15.9■□□□□ 0.14
EFG1Q3E705 RTC3YHR087W 336 nt15.53■□□□□ 0.08
EFG1Q3E705 RVS167YDR388W 1449 nt15.51■□□□□ 0.07
EFG1Q3E705 SCJ1YMR214W 1134 nt15.37■□□□□ 0.05
EFG1Q3E705 PET122YER153C 765 nt15.33■□□□□ 0.04
EFG1Q3E705 ATS1YAL020C 1002 nt15.31■□□□□ 0.04
EFG1Q3E705 tP(UGG)O3tP(UGG)O3 72 nt15.29■□□□□ 0.04
EFG1Q3E705 SCR1SCR1 522 nt15.19■□□□□ 0.02
EFG1Q3E705 SHR5YOL110W 714 nt14.94□□□□□ -0.02
EFG1Q3E705 RRN5YLR141W 1092 nt14.89□□□□□ -0.03
EFG1Q3E705 YDJ1YNL064C 1230 nt14.81□□□□□ -0.04
EFG1Q3E705 YER088W-BYER088W-B 147 nt14.6□□□□□ -0.07
EFG1Q3E705 RSB1YOR049C 1065 nt14.58□□□□□ -0.08
EFG1Q3E705 URN1YPR152C 1398 nt14.53□□□□□ -0.08
EFG1Q3E705 DEP1YAL013W 1218 nt14.5□□□□□ -0.09
EFG1Q3E705 GAR1YHR089C 618 nt14.46□□□□□ -0.09
EFG1Q3E705 PUT4YOR348C 1884 nt14.44□□□□□ -0.1
EFG1Q3E705 RPN10YHR200W 807 nt14.34□□□□□ -0.11
EFG1Q3E705 OPI9YLR338W 858 nt14.33□□□□□ -0.12
EFG1Q3E705 YNL208WYNL208W 600 nt14.3□□□□□ -0.12
EFG1Q3E705 SAH1YER043C 1350 nt14.23□□□□□ -0.13
EFG1Q3E705 PST2YDR032C 597 nt14.19□□□□□ -0.14
EFG1Q3E705 ARE1YCR048W 1833 nt14.17□□□□□ -0.14
EFG1Q3E705 TIR1YER011W 765 nt13.99□□□□□ -0.17
EFG1Q3E705 YHR049C-AYHR049C-A 297 nt13.99□□□□□ -0.17
EFG1Q3E705 POA1YBR022W 534 nt13.98□□□□□ -0.17
EFG1Q3E705 PUN1YLR414C 792 nt13.93□□□□□ -0.18
EFG1Q3E705 YJR018WYJR018W 363 nt13.87□□□□□ -0.19
EFG1Q3E705 SSA1YAL005C 1929 nt13.81□□□□□ -0.2
EFG1Q3E705 PTC2YER089C 1395 nt13.74□□□□□ -0.21
EFG1Q3E705 BSC6YOL137W 1494 nt13.68□□□□□ -0.22
EFG1Q3E705 BUD23YCR047C 828 nt13.66□□□□□ -0.22
EFG1Q3E705 YJR120WYJR120W 351 nt13.62□□□□□ -0.23
EFG1Q3E705 YKL097CYKL097C 411 nt13.62□□□□□ -0.23
EFG1Q3E705 RPP2BYDR382W 333 nt13.6□□□□□ -0.23
EFG1Q3E705 SHU1YHL006C 453 nt13.6□□□□□ -0.23
EFG1Q3E705 NAB2YGL122C 1578 nt13.58□□□□□ -0.23
EFG1Q3E705 SRB2YHR041C 633 nt13.54□□□□□ -0.24
EFG1Q3E705 SSA3YBL075C 1950 nt13.47□□□□□ -0.25
EFG1Q3E705 DAL1YIR027C 1383 nt13.4□□□□□ -0.26
EFG1Q3E705 INM2YDR287W 879 nt13.39□□□□□ -0.27
EFG1Q3E705 YAL037C-BYAL037C-B 975 nt13.39□□□□□ -0.27
EFG1Q3E705 FIS1YIL065C 468 nt13.37□□□□□ -0.27
EFG1Q3E705 WWM1YFL010C 636 nt13.35□□□□□ -0.27
EFG1Q3E705 FPR4YLR449W 1179 nt13.35□□□□□ -0.27
EFG1Q3E705 BDH2YAL061W 1254 nt13.31□□□□□ -0.28
EFG1Q3E705 YGR021WYGR021W 873 nt13.3□□□□□ -0.28
EFG1Q3E705 PHO4YFR034C 939 nt13.26□□□□□ -0.29
EFG1Q3E705 YBL100CYBL100C 315 nt13.24□□□□□ -0.29
EFG1Q3E705 HOM6YJR139C 1080 nt13.23□□□□□ -0.29
EFG1Q3E705 YFL021C-AYFL021C-A 855 nt13.16□□□□□ -0.3
EFG1Q3E705 MNP1YGL068W 585 nt13.14□□□□□ -0.31
EFG1Q3E705 LSM3YLR438C-A 270 nt13.14□□□□□ -0.31
EFG1Q3E705 FUN26YAL022C 1554 nt13.09□□□□□ -0.31
EFG1Q3E705 TRM9YML014W 840 nt13.06□□□□□ -0.32
EFG1Q3E705 YOR139CYOR139C 393 nt13.05□□□□□ -0.32
EFG1Q3E705 SPT5YML010W 3192 nt13.05□□□□□ -0.32
EFG1Q3E705 RKM5YLR137W 1104 nt13.04□□□□□ -0.32
EFG1Q3E705 YPS1YLR120C 1710 nt13.02□□□□□ -0.33
EFG1Q3E705 NPL3YDR432W 1245 nt12.98□□□□□ -0.33
EFG1Q3E705 YOL037CYOL037C 354 nt12.95□□□□□ -0.34
EFG1Q3E705 CCT6YDR188W 1641 nt12.94□□□□□ -0.34
EFG1Q3E705 YDR095CYDR095C 411 nt12.93□□□□□ -0.34
EFG1Q3E705 ALF1YNL148C 765 nt12.92□□□□□ -0.34
EFG1Q3E705 YHR165W-AYHR165W-A 312 nt12.87□□□□□ -0.35
EFG1Q3E705 MEP2YNL142W 1500 nt12.85□□□□□ -0.35
EFG1Q3E705 SUF2tP(AGG)C 72 nt12.85□□□□□ -0.35
EFG1Q3E705 SUF10tP(AGG)N 72 nt12.85□□□□□ -0.35
EFG1Q3E705 SIS1YNL007C 1059 nt12.72□□□□□ -0.37
EFG1Q3E705 RPP2AYOL039W 321 nt12.7□□□□□ -0.38
EFG1Q3E705 YLR281CYLR281C 468 nt12.64□□□□□ -0.39
EFG1Q3E705 DCW1YKL046C 1350 nt12.63□□□□□ -0.39
EFG1Q3E705 PTP1YDL230W 1008 nt12.62□□□□□ -0.39
EFG1Q3E705 WHI5YOR083W 888 nt12.6□□□□□ -0.39
EFG1Q3E705 YLR154C-GYLR154C-G 150 nt12.59□□□□□ -0.39
EFG1Q3E705 SSA4YER103W 1929 nt12.56□□□□□ -0.4
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms